BLASTX nr result

ID: Glycyrrhiza23_contig00016446 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00016446
         (814 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK43681.1| unknown [Lotus japonicus]                              187   2e-45
ref|XP_003528675.1| PREDICTED: E3 ubiquitin-protein ligase RHF1A...   176   7e-42
ref|XP_003541623.1| PREDICTED: E3 ubiquitin-protein ligase RHF1A...   170   3e-40
ref|XP_003547246.1| PREDICTED: E3 ubiquitin-protein ligase RHF1A...   169   9e-40
ref|XP_003550504.1| PREDICTED: E3 ubiquitin-protein ligase RHF1A...   148   2e-33

>gb|AFK43681.1| unknown [Lotus japonicus]
          Length = 365

 Score =  187 bits (475), Expect = 2e-45
 Identities = 104/165 (63%), Positives = 125/165 (75%)
 Frame = -1

Query: 814 RVLHSQPPPESGRRVNTXXXXXXXXXXXXXXXXXXARYKESISKSTRGLKEKLLARNATV 635
           RV++SQ PPES RR+NT                  A+YKESISK TRGLKEKLLARNA+V
Sbjct: 206 RVIYSQTPPESARRLNTPEMFSFPESIKSKFSAASAKYKESISKGTRGLKEKLLARNASV 265

Query: 634 KELSKGVQREMNAGIAGVARMIERFDLTSKKPSSPLIPDCTGGTSGFPKEGNSVEENGIG 455
           KELSKGVQREMNAGIAGVARMIER DL+SK+ S+ L PD TG TSGFP+E  SV+E    
Sbjct: 266 KELSKGVQREMNAGIAGVARMIERLDLSSKR-SAALFPDRTGETSGFPEEVKSVKE---- 320

Query: 454 HSPNEESGNVVHDVSSDAPSLVSSMIAAKMEIPPCVQSGHDAVKT 320
           HSP+E++ +VVH V+SDAPSL+S+M+ A++EI P VQSG  A+KT
Sbjct: 321 HSPSEDNEDVVHHVTSDAPSLISNMVPARVEIAPHVQSGQGALKT 365


>ref|XP_003528675.1| PREDICTED: E3 ubiquitin-protein ligase RHF1A-like [Glycine max]
          Length = 371

 Score =  176 bits (445), Expect = 7e-42
 Identities = 102/167 (61%), Positives = 120/167 (71%), Gaps = 2/167 (1%)
 Frame = -1

Query: 814 RVLHSQPPPESGRRVNTXXXXXXXXXXXXXXXXXXARYKESISKSTRGLKEKLLARNATV 635
           RV++SQP PE+ RR+NT                  AR KESISK+TRGLKEKL+ARNA+V
Sbjct: 215 RVIYSQPSPENARRLNTSEIFSFPESFKSKLSAASARCKESISKNTRGLKEKLIARNASV 274

Query: 634 KELSKGVQREMNAGIAGVARMIERFDLTSKKPSSPLIPDCTGGTSGFPKEGNSVEENGIG 455
           KELSKGVQREMNAGIAGVARM+ER DLTSK+ SSPLI          P +G SV+ENG+ 
Sbjct: 275 KELSKGVQREMNAGIAGVARMVERLDLTSKRSSSPLI----------PVKGKSVQENGVE 324

Query: 454 HSPN-EESGNVVHDVSSDAPSLVSSMIAAKMEIPP-CVQSGHDAVKT 320
             PN EESG +V DV+S+A SL SS++A  +EIPP CVQSGHDAV T
Sbjct: 325 QFPNKEESGVLVADVTSNAASLDSSLVAVGVEIPPSCVQSGHDAVMT 371


>ref|XP_003541623.1| PREDICTED: E3 ubiquitin-protein ligase RHF1A-like [Glycine max]
          Length = 359

 Score =  170 bits (431), Expect = 3e-40
 Identities = 97/163 (59%), Positives = 111/163 (68%), Gaps = 5/163 (3%)
 Frame = -1

Query: 799 QPP-----PESGRRVNTXXXXXXXXXXXXXXXXXXARYKESISKSTRGLKEKLLARNATV 635
           QPP     PES RR NT                   RYKESISKST GLKEKLLA N +V
Sbjct: 198 QPPALNTTPESARRPNTSEISFPESFKSKFSAASA-RYKESISKSTLGLKEKLLAHNVSV 256

Query: 634 KELSKGVQREMNAGIAGVARMIERFDLTSKKPSSPLIPDCTGGTSGFPKEGNSVEENGIG 455
           KELSKGVQREMNAGIAGVARMIER DL+SK+ S+PLI   +  TS FP  G SVEENGIG
Sbjct: 257 KELSKGVQREMNAGIAGVARMIERLDLSSKRSSAPLIAVHSVATSDFPSSGKSVEENGIG 316

Query: 454 HSPNEESGNVVHDVSSDAPSLVSSMIAAKMEIPPCVQSGHDAV 326
            SP++E+G  VHDVSSD P LV++M + + + PP +QSGH  V
Sbjct: 317 GSPSKENGGAVHDVSSDVPPLVTNMQSFRTKTPPFLQSGHGMV 359


>ref|XP_003547246.1| PREDICTED: E3 ubiquitin-protein ligase RHF1A-like [Glycine max]
          Length = 419

 Score =  169 bits (427), Expect = 9e-40
 Identities = 96/160 (60%), Positives = 107/160 (66%), Gaps = 5/160 (3%)
 Frame = -1

Query: 799 QPP-----PESGRRVNTXXXXXXXXXXXXXXXXXXARYKESISKSTRGLKEKLLARNATV 635
           QPP     P+S RR NT                  ARYKESISK TR LKEKLLA N +V
Sbjct: 257 QPPALNTNPDSARRPNTSDMFSFPKSFKSKFSSASARYKESISKGTRDLKEKLLAHNVSV 316

Query: 634 KELSKGVQREMNAGIAGVARMIERFDLTSKKPSSPLIPDCTGGTSGFPKEGNSVEENGIG 455
           KELSKGVQREMNAGIAGV RMIER DL+SK+ SSPLI   +G TS FP     VEENGIG
Sbjct: 317 KELSKGVQREMNAGIAGVVRMIERLDLSSKRSSSPLIAVHSGATSDFPSSRKPVEENGIG 376

Query: 454 HSPNEESGNVVHDVSSDAPSLVSSMIAAKMEIPPCVQSGH 335
            SP++ESG  VHDVSSD   LV++M + + E PP VQSGH
Sbjct: 377 GSPSKESGGAVHDVSSDVLPLVTNMQSFQTETPPFVQSGH 416


>ref|XP_003550504.1| PREDICTED: E3 ubiquitin-protein ligase RHF1A-like [Glycine max]
          Length = 376

 Score =  148 bits (373), Expect = 2e-33
 Identities = 92/166 (55%), Positives = 109/166 (65%), Gaps = 1/166 (0%)
 Frame = -1

Query: 814 RVLHSQPPPESGRRVNTXXXXXXXXXXXXXXXXXXARYKESISKSTRGLKEKLLARNATV 635
           RV++SQP PES RR+NT                  AR KESISK+TRGLKEKL+ARNA+V
Sbjct: 231 RVIYSQPSPESARRLNTSEMFSFSESFKSKLSAASARCKESISKNTRGLKEKLIARNASV 290

Query: 634 KELSKGVQREMNAGIAGVARMIERFDLTSKKPSSPLIPDCTGGTSGFPKEGNSVEENGIG 455
           KELSKGVQ EMNAGIA VARMIER DLTSK  SS LI          P +G SV+ENG+ 
Sbjct: 291 KELSKGVQCEMNAGIACVARMIERLDLTSKWSSSALI----------PVKGKSVQENGV- 339

Query: 454 HSPNEESGNVVHDVSSDAPSLVSSMIAAKMEIPP-CVQSGHDAVKT 320
                    +V +V+S+A SL SS++A  +E PP CVQSGHDA +T
Sbjct: 340 ---------LVGNVTSNASSLDSSLVAVGVETPPSCVQSGHDAART 376


Top