BLASTX nr result

ID: Glycyrrhiza23_contig00016420 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00016420
         (255 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003518134.1| PREDICTED: uncharacterized protein LOC100795...   112   3e-23
ref|XP_002529505.1| conserved hypothetical protein [Ricinus comm...    70   2e-10
ref|XP_004168520.1| PREDICTED: RRP12-like protein-like, partial ...    69   4e-10
ref|XP_004136785.1| PREDICTED: RRP12-like protein-like [Cucumis ...    69   4e-10
ref|XP_002308940.1| predicted protein [Populus trichocarpa] gi|2...    64   1e-08

>ref|XP_003518134.1| PREDICTED: uncharacterized protein LOC100795433 [Glycine max]
          Length = 1156

 Score =  112 bits (280), Expect = 3e-23
 Identities = 54/84 (64%), Positives = 68/84 (80%)
 Frame = +3

Query: 3   QMRISLKGAIRCLASITDSSVTKEVLMSLLKRFQFVDCEGESDLLTSNSKALDSEPSDEK 182
           + R  LKGAI CLAS+TDSSVTKEV +SLLK FQFVDCEGE ++LTS +  +DS+ +D K
Sbjct: 659 ETRFCLKGAIGCLASVTDSSVTKEVFVSLLKSFQFVDCEGEGEILTSPAGVVDSDQNDLK 718

Query: 183 GCSQRCLMLEIASCFVEGANDSLV 254
           G SQRCL+LE+A C V+GA D+L+
Sbjct: 719 GYSQRCLILELAYCLVQGAKDNLI 742


>ref|XP_002529505.1| conserved hypothetical protein [Ricinus communis]
           gi|223531021|gb|EEF32874.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 1167

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 37/90 (41%), Positives = 58/90 (64%), Gaps = 6/90 (6%)
 Frame = +3

Query: 3   QMRISLKGAIRCLASITDSSVTKEVLMSLLKRFQFVDCEGESDLLTSNSKAL------DS 164
           + R+ +K A+ CLASITDSS+TK + MSLL+RFQ V+  GE + L ++   L        
Sbjct: 666 EKRLYIKDAVGCLASITDSSITKNIFMSLLERFQLVNDRGEFEQLVNHGDELIEPEQGSF 725

Query: 165 EPSDEKGCSQRCLMLEIASCFVEGANDSLV 254
             ++E G  +RC+++E+AS  +EGA + L+
Sbjct: 726 RANEEDG--KRCVIMELASSLIEGAKEDLI 753


>ref|XP_004168520.1| PREDICTED: RRP12-like protein-like, partial [Cucumis sativus]
          Length = 726

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 36/82 (43%), Positives = 52/82 (63%)
 Frame = +3

Query: 9   RISLKGAIRCLASITDSSVTKEVLMSLLKRFQFVDCEGESDLLTSNSKALDSEPSDEKGC 188
           R  LK AI CLASI DS VTK+V MSLL+RFQF++ + E +   +N+         +   
Sbjct: 213 RSHLKDAIGCLASIMDSRVTKKVFMSLLERFQFLNTKDEFEEREANADESAQNAEGKSRT 272

Query: 189 SQRCLMLEIASCFVEGANDSLV 254
            +RC+MLE+A+  V GA++ L+
Sbjct: 273 RERCVMLELAAAIVRGADEDLI 294


>ref|XP_004136785.1| PREDICTED: RRP12-like protein-like [Cucumis sativus]
          Length = 1149

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 36/82 (43%), Positives = 52/82 (63%)
 Frame = +3

Query: 9   RISLKGAIRCLASITDSSVTKEVLMSLLKRFQFVDCEGESDLLTSNSKALDSEPSDEKGC 188
           R  LK AI CLASI DS VTK+V MSLL+RFQF++ + E +   +N+         +   
Sbjct: 657 RSHLKDAIGCLASIMDSRVTKKVFMSLLERFQFLNTKDEFEEREANADESAQNAEGKSRT 716

Query: 189 SQRCLMLEIASCFVEGANDSLV 254
            +RC+MLE+A+  V GA++ L+
Sbjct: 717 RERCVMLELAAAIVRGADEDLI 738


>ref|XP_002308940.1| predicted protein [Populus trichocarpa] gi|222854916|gb|EEE92463.1|
           predicted protein [Populus trichocarpa]
          Length = 1177

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 37/87 (42%), Positives = 54/87 (62%), Gaps = 8/87 (9%)
 Frame = +3

Query: 18  LKGAIRCLASITDSSVTKEVLMSLLKRFQFVDCEGE--------SDLLTSNSKALDSEPS 173
           +K AI CLASI++SSVT++V MSLLKRF+FV  EGE         +L+   +++L+ +  
Sbjct: 669 IKDAIACLASISNSSVTQKVFMSLLKRFRFVTGEGEFQQPKSDGDELIEEEARSLNVQEK 728

Query: 174 DEKGCSQRCLMLEIASCFVEGANDSLV 254
           D      RC+M+E+AS  V GA    +
Sbjct: 729 D----VHRCVMMELASSLVVGAKTDFI 751


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