BLASTX nr result

ID: Glycyrrhiza23_contig00016410 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00016410
         (574 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK45260.1| unknown [Lotus japonicus]                              154   8e-36
ref|NP_001239900.1| uncharacterized protein LOC100795443 [Glycin...   154   1e-35
gb|ACU16481.1| unknown [Glycine max]                                  150   1e-34
ref|XP_002322890.1| predicted protein [Populus trichocarpa] gi|2...   131   9e-29
gb|ABK96655.1| unknown [Populus trichocarpa x Populus deltoides]      131   9e-29

>gb|AFK45260.1| unknown [Lotus japonicus]
          Length = 239

 Score =  154 bits (390), Expect = 8e-36
 Identities = 95/164 (57%), Positives = 103/164 (62%), Gaps = 5/164 (3%)
 Frame = -1

Query: 478 MAHYHYLLHNPSSPLISFPSPHGSPSARTLL-----LSKTLSCHLXXXXXXXXXXXXXXT 314
           +AH+HYLL+ P    I  PSP  S S    +     L  TLS HL              +
Sbjct: 2   VAHHHYLLYIP----IPSPSPSLSVSQYRSIPFRTSLPNTLSSHLSSFPTTSSLNKHNTS 57

Query: 313 PWWHTKTHSKPLQXXXXXXXXXXXXXXXXXXAEAAKVGVNKPELLPKELSTVIDVAGFLS 134
               TK HSKPLQ                  AEAAKVGVNKPELLPKE STVIDVAGFLS
Sbjct: 58  NSI-TKIHSKPLQFALSGALSLVLLLGGTGLAEAAKVGVNKPELLPKEFSTVIDVAGFLS 116

Query: 133 DGQEKRLAQEIASLETDTGFKLRVLAQNYPDTPGLAVRDFWQVD 2
           DGQEKRLAQEIA++E DTGFKLRVLAQNYPDTPGLAV+DFWQVD
Sbjct: 117 DGQEKRLAQEIAAIEKDTGFKLRVLAQNYPDTPGLAVKDFWQVD 160


>ref|NP_001239900.1| uncharacterized protein LOC100795443 [Glycine max]
           gi|255639397|gb|ACU19994.1| unknown [Glycine max]
          Length = 229

 Score =  154 bits (388), Expect = 1e-35
 Identities = 94/163 (57%), Positives = 99/163 (60%), Gaps = 2/163 (1%)
 Frame = -1

Query: 484 MGMAHYHYLLHNPS--SPLISFPSPHGSPSARTLLLSKTLSCHLXXXXXXXXXXXXXXTP 311
           M MAH HYLLH PS  S   S  SP  S      L  KTLSC +               P
Sbjct: 1   MMMAHSHYLLHIPSLSSLSASLTSPPRSLLPVRTLQPKTLSCRVPSFPTRT--------P 52

Query: 310 WWHTKTHSKPLQXXXXXXXXXXXXXXXXXXAEAAKVGVNKPELLPKELSTVIDVAGFLSD 131
           W     H KPL                   AEAAKVGVNKPELLPKE STVIDVAGFLSD
Sbjct: 53  W-----HFKPLHFALSGALSLGLLFGGIGVAEAAKVGVNKPELLPKEFSTVIDVAGFLSD 107

Query: 130 GQEKRLAQEIASLETDTGFKLRVLAQNYPDTPGLAVRDFWQVD 2
           GQEKRLA+EIA+LE DTGFKLRVLAQNYP TPGLA++DFWQVD
Sbjct: 108 GQEKRLAEEIAALEADTGFKLRVLAQNYPVTPGLAIKDFWQVD 150


>gb|ACU16481.1| unknown [Glycine max]
          Length = 228

 Score =  150 bits (380), Expect = 1e-34
 Identities = 92/161 (57%), Positives = 97/161 (60%), Gaps = 2/161 (1%)
 Frame = -1

Query: 478 MAHYHYLLHNPS--SPLISFPSPHGSPSARTLLLSKTLSCHLXXXXXXXXXXXXXXTPWW 305
           MAH HYLLH PS  S   S  SP  S      L  KTLSC +               PW 
Sbjct: 2   MAHSHYLLHIPSLSSLSASLTSPPRSLLPVRTLQPKTLSCRVPSFPTRT--------PW- 52

Query: 304 HTKTHSKPLQXXXXXXXXXXXXXXXXXXAEAAKVGVNKPELLPKELSTVIDVAGFLSDGQ 125
               H KPL                   AEAAKVGVNKPELLPKE STVIDVAGFLSDGQ
Sbjct: 53  ----HFKPLHFALSGALSLGLLFGGIGVAEAAKVGVNKPELLPKEFSTVIDVAGFLSDGQ 108

Query: 124 EKRLAQEIASLETDTGFKLRVLAQNYPDTPGLAVRDFWQVD 2
           EKRLA+EIA+LE DTGFKLRV AQNYP TPGLA++DFWQVD
Sbjct: 109 EKRLAEEIAALEADTGFKLRVSAQNYPVTPGLAIKDFWQVD 149


>ref|XP_002322890.1| predicted protein [Populus trichocarpa] gi|222867520|gb|EEF04651.1|
           predicted protein [Populus trichocarpa]
          Length = 215

 Score =  131 bits (329), Expect = 9e-29
 Identities = 62/70 (88%), Positives = 67/70 (95%)
 Frame = -1

Query: 211 AKVGVNKPELLPKELSTVIDVAGFLSDGQEKRLAQEIASLETDTGFKLRVLAQNYPDTPG 32
           AKVGVNKPELLPKE +TVIDVAGFLSDGQEKRLA+EI+ +E DTGFKLRVLAQNYPDTPG
Sbjct: 67  AKVGVNKPELLPKEFTTVIDVAGFLSDGQEKRLAEEISDIEKDTGFKLRVLAQNYPDTPG 126

Query: 31  LAVRDFWQVD 2
           LA+RDFWQVD
Sbjct: 127 LAIRDFWQVD 136


>gb|ABK96655.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 220

 Score =  131 bits (329), Expect = 9e-29
 Identities = 62/70 (88%), Positives = 67/70 (95%)
 Frame = -1

Query: 211 AKVGVNKPELLPKELSTVIDVAGFLSDGQEKRLAQEIASLETDTGFKLRVLAQNYPDTPG 32
           AKVGVNKPELLPKE +TVIDVAGFLSDGQEKRLA+EI+ +E DTGFKLRVLAQNYPDTPG
Sbjct: 72  AKVGVNKPELLPKEFTTVIDVAGFLSDGQEKRLAEEISDIEKDTGFKLRVLAQNYPDTPG 131

Query: 31  LAVRDFWQVD 2
           LA+RDFWQVD
Sbjct: 132 LAIRDFWQVD 141


Top