BLASTX nr result

ID: Glycyrrhiza23_contig00016404 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00016404
         (279 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003517782.1| PREDICTED: RING-H2 finger protein ATL47-like...   127   1e-27
ref|XP_003519814.1| PREDICTED: RING-H2 finger protein ATL46-like...   122   3e-26
ref|XP_003613273.1| RING finger protein [Medicago truncatula] gi...   120   9e-26
ref|XP_003551186.1| PREDICTED: RING-H2 finger protein ATL46-like...    98   8e-19
ref|XP_003532021.1| PREDICTED: RING-H2 finger protein ATL46-like...    97   1e-18

>ref|XP_003517782.1| PREDICTED: RING-H2 finger protein ATL47-like [Glycine max]
          Length = 376

 Score =  127 bits (318), Expect = 1e-27
 Identities = 71/93 (76%), Positives = 76/93 (81%), Gaps = 1/93 (1%)
 Frame = -3

Query: 277 SDLQVALHPSSRGDHGSMRQVLKGIRATPNGSSSIDGD-VEGKKINLARKGESFSVSKIW 101
           SDL+VAL PSS    GSMRQ+LKG RA  NGSS +DGD VEGKKIN+ARKGESFSVSKIW
Sbjct: 288 SDLRVALGPSS----GSMRQLLKG-RAATNGSSFLDGDAVEGKKINIARKGESFSVSKIW 342

Query: 100 QWSRKDKITSSSDTHHFHNSAATSTLPWMNKAR 2
           Q SRKDK+T SSD  HFHNS  TSTLPWMNK R
Sbjct: 343 QCSRKDKLTGSSDA-HFHNSTVTSTLPWMNKVR 374


>ref|XP_003519814.1| PREDICTED: RING-H2 finger protein ATL46-like [Glycine max]
          Length = 380

 Score =  122 bits (306), Expect = 3e-26
 Identities = 70/93 (75%), Positives = 75/93 (80%), Gaps = 1/93 (1%)
 Frame = -3

Query: 277 SDLQVALHPSSRGDHGSMRQVLKGIRATPNGSSSIDGD-VEGKKINLARKGESFSVSKIW 101
           SDL+VAL  SS    GSMRQ LKG  AT NGSS IDGD VEGKKIN+ARKGESFSVSKIW
Sbjct: 291 SDLRVALGTSS----GSMRQ-LKGRTAT-NGSSFIDGDAVEGKKINIARKGESFSVSKIW 344

Query: 100 QWSRKDKITSSSDTHHFHNSAATSTLPWMNKAR 2
           QWSRKDK+T SSD H  ++S  TSTLPWMNKAR
Sbjct: 345 QWSRKDKLTGSSDAHFLNSSTVTSTLPWMNKAR 377


>ref|XP_003613273.1| RING finger protein [Medicago truncatula]
           gi|355514608|gb|AES96231.1| RING finger protein
           [Medicago truncatula]
          Length = 368

 Score =  120 bits (302), Expect = 9e-26
 Identities = 70/93 (75%), Positives = 76/93 (81%), Gaps = 1/93 (1%)
 Frame = -3

Query: 277 SDLQVALHPSSRGDHGSMRQVLKGIRATPNGSSSIDGDVEGKKINLARKGESFSVSKIWQ 98
           SDLQVAL  +S+GD GSMRQ LKGIR   +GS S DGDVEGKKIN+ARKGESFSVSKIWQ
Sbjct: 278 SDLQVALK-ASKGD-GSMRQ-LKGIREIQDGSFSNDGDVEGKKINIARKGESFSVSKIWQ 334

Query: 97  WSRKD-KITSSSDTHHFHNSAATSTLPWMNKAR 2
           WS+KD KI SSSDT HFHN  A  +L WMNKAR
Sbjct: 335 WSKKDSKIPSSSDT-HFHNCVANESLQWMNKAR 366


>ref|XP_003551186.1| PREDICTED: RING-H2 finger protein ATL46-like [Glycine max]
          Length = 384

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 61/96 (63%), Positives = 70/96 (72%), Gaps = 5/96 (5%)
 Frame = -3

Query: 277 SDLQVALHPSSRGDHG-----SMRQVLKGIRATPNGSSSIDGDVEGKKINLARKGESFSV 113
           SDLQVAL P+ RGD G     SMRQ LKG R T  G+SS D DVEGKKIN+ RKGESFSV
Sbjct: 291 SDLQVALCPN-RGDGGGVSDSSMRQ-LKG-RLTNYGNSSTD-DVEGKKINITRKGESFSV 346

Query: 112 SKIWQWSRKDKITSSSDTHHFHNSAATSTLPWMNKA 5
           SKIWQWS+KDK+ S S  +H   S  T+ LPW+N+A
Sbjct: 347 SKIWQWSKKDKV-SISQENHLGGSNVTAALPWVNRA 381


>ref|XP_003532021.1| PREDICTED: RING-H2 finger protein ATL46-like [Glycine max]
          Length = 384

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 61/97 (62%), Positives = 71/97 (73%), Gaps = 5/97 (5%)
 Frame = -3

Query: 277 SDLQVALHPSSRGDHG-----SMRQVLKGIRATPNGSSSIDGDVEGKKINLARKGESFSV 113
           SDLQVAL P+ RGD G     SMRQ LKG R    G+SS D DVEGKKIN+ARKGESFSV
Sbjct: 291 SDLQVALCPN-RGDGGGVNGDSMRQ-LKG-RLVNYGNSSTD-DVEGKKINIARKGESFSV 346

Query: 112 SKIWQWSRKDKITSSSDTHHFHNSAATSTLPWMNKAR 2
           SKIWQWS+KDK+ S S  +H   S  T+ LPWM++A+
Sbjct: 347 SKIWQWSKKDKV-SISQENHLGGSNVTAALPWMHRAQ 382


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