BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00016390
         (972 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003625033.1| DNA-directed RNA polymerases I, II, and III ...   358   1e-96
gb|AFK43162.1| unknown [Medicago truncatula]                          355   7e-96
ref|NP_001236527.1| uncharacterized protein LOC100306033 [Glycin...   350   2e-94
ref|XP_002529165.1| DNA-directed RNA polymerase II, putative [Ri...   332   6e-89
ref|XP_004136650.1| PREDICTED: DNA-directed RNA polymerases I, I...   310   3e-82

>ref|XP_003625033.1| DNA-directed RNA polymerases I, II, and III subunit RPABC1
           [Medicago truncatula] gi|124359979|gb|ABN07995.1| RNA
           polymerase subunit, RPB5; RNA polymerase Rpb5,
           N-terminal [Medicago truncatula]
           gi|355500048|gb|AES81251.1| DNA-directed RNA polymerases
           I, II, and III subunit RPABC1 [Medicago truncatula]
          Length = 248

 Score =  358 bits (918), Expect = 1e-96
 Identities = 176/211 (83%), Positives = 197/211 (93%)
 Frame = +3

Query: 72  CLISTEKEEGSIESHRYYLSRRTTLEMLKDRGYSIPSSETNLSLSEFRAIHGHSPDVDRL 251
           CL  T+K+ GSIESHRYYLSRRT LEMLKDRGYSIPS E  LSL +FR IHG SPDVDRL
Sbjct: 39  CLF-TKKDNGSIESHRYYLSRRTVLEMLKDRGYSIPSDEIQLSLDDFRQIHGQSPDVDRL 97

Query: 252 RFSATHSSNPSKRVLVIFTGPGAVKVNAIRNIAGQIVNKDTLTGLILIVQNQITSQALKA 431
           R +ATH++NPSKR+LV+F+GPG VKVN +R+IAGQIVN+++LTGLILIVQNQITSQALKA
Sbjct: 98  RLTATHATNPSKRILVVFSGPGIVKVNGVRDIAGQIVNRESLTGLILIVQNQITSQALKA 157

Query: 432 VNLLNFKVEIFQITDLLVNITKHVLKPKHQVLTDRQKQNLLKKYNIEEKQLPRMLQTDAI 611
           VNLL+FKVEIFQITDLLVN TKHVLKPKHQVLTD+QK+NLLKKY+I+EKQLPRMLQTDAI
Sbjct: 158 VNLLSFKVEIFQITDLLVNATKHVLKPKHQVLTDKQKKNLLKKYDIQEKQLPRMLQTDAI 217

Query: 612 ARYYGLERGQVVKVTYSGEITQMHVTYRCVW 704
           ARYYGL+RGQVVKVTY+GEITQMHVTYRCVW
Sbjct: 218 ARYYGLQRGQVVKVTYTGEITQMHVTYRCVW 248


>gb|AFK43162.1| unknown [Medicago truncatula]
          Length = 248

 Score =  355 bits (912), Expect = 7e-96
 Identities = 175/211 (82%), Positives = 196/211 (92%)
 Frame = +3

Query: 72  CLISTEKEEGSIESHRYYLSRRTTLEMLKDRGYSIPSSETNLSLSEFRAIHGHSPDVDRL 251
           CL  T+K+ GSIESHRYYLSRRT LEMLKDRGYSIPS E  LSL +FR IHG SPDVDRL
Sbjct: 39  CLF-TKKDNGSIESHRYYLSRRTVLEMLKDRGYSIPSDEIQLSLDDFRQIHGQSPDVDRL 97

Query: 252 RFSATHSSNPSKRVLVIFTGPGAVKVNAIRNIAGQIVNKDTLTGLILIVQNQITSQALKA 431
           R +ATH++NPSKR+LV+F+GPG VKVN +R+IAGQIVN+++LTGLILIVQNQITSQALKA
Sbjct: 98  RLTATHATNPSKRILVVFSGPGIVKVNGVRDIAGQIVNRESLTGLILIVQNQITSQALKA 157

Query: 432 VNLLNFKVEIFQITDLLVNITKHVLKPKHQVLTDRQKQNLLKKYNIEEKQLPRMLQTDAI 611
           VNLL+FKVEI QITDLLVN TKHVLKPKHQVLTD+QK+NLLKKY+I+EKQLPRMLQTDAI
Sbjct: 158 VNLLSFKVEILQITDLLVNATKHVLKPKHQVLTDKQKKNLLKKYDIQEKQLPRMLQTDAI 217

Query: 612 ARYYGLERGQVVKVTYSGEITQMHVTYRCVW 704
           ARYYGL+RGQVVKVTY+GEITQMHVTYRCVW
Sbjct: 218 ARYYGLQRGQVVKVTYTGEITQMHVTYRCVW 248


>ref|NP_001236527.1| uncharacterized protein LOC100306033 [Glycine max]
           gi|255627335|gb|ACU14012.1| unknown [Glycine max]
          Length = 237

 Score =  350 bits (899), Expect = 2e-94
 Identities = 174/204 (85%), Positives = 187/204 (91%)
 Frame = +3

Query: 93  EEGSIESHRYYLSRRTTLEMLKDRGYSIPSSETNLSLSEFRAIHGHSPDVDRLRFSATHS 272
           + GS+ESHRYYLSRRTTLEMLKDRGYSIPS E +LSLS+FR IHG  PD DRLR S TH+
Sbjct: 34  DNGSVESHRYYLSRRTTLEMLKDRGYSIPSHEIDLSLSDFRDIHGQFPDPDRLRLSLTHA 93

Query: 273 SNPSKRVLVIFTGPGAVKVNAIRNIAGQIVNKDTLTGLILIVQNQITSQALKAVNLLNFK 452
           +N SKR+LVIF GPG VKV AIRN AGQI+N+DTLTGLILIV+N ITSQALKAVNL +FK
Sbjct: 94  TNSSKRILVIFCGPGVVKVTAIRNTAGQIINRDTLTGLILIVENHITSQALKAVNLFSFK 153

Query: 453 VEIFQITDLLVNITKHVLKPKHQVLTDRQKQNLLKKYNIEEKQLPRMLQTDAIARYYGLE 632
           VEIFQITDLLVNITKHVLKPKHQVLTD+QK NLLKKYNIEEKQLPRMLQTDAIARYYGLE
Sbjct: 154 VEIFQITDLLVNITKHVLKPKHQVLTDKQKINLLKKYNIEEKQLPRMLQTDAIARYYGLE 213

Query: 633 RGQVVKVTYSGEITQMHVTYRCVW 704
           RGQVVKVTYSGE+TQMHVTYRCVW
Sbjct: 214 RGQVVKVTYSGEVTQMHVTYRCVW 237


>ref|XP_002529165.1| DNA-directed RNA polymerase II, putative [Ricinus communis]
           gi|223531389|gb|EEF33224.1| DNA-directed RNA polymerase
           II, putative [Ricinus communis]
          Length = 238

 Score =  332 bits (852), Expect = 6e-89
 Identities = 161/208 (77%), Positives = 190/208 (91%)
 Frame = +3

Query: 81  STEKEEGSIESHRYYLSRRTTLEMLKDRGYSIPSSETNLSLSEFRAIHGHSPDVDRLRFS 260
           S+  ++G+ E+HRYYLSRRT LEML+DRGYS+PSSE +LSL EFRAIHG +PD+DRL+FS
Sbjct: 31  SSYADDGTHETHRYYLSRRTVLEMLRDRGYSVPSSEIDLSLQEFRAIHGPNPDIDRLKFS 90

Query: 261 ATHSSNPSKRVLVIFTGPGAVKVNAIRNIAGQIVNKDTLTGLILIVQNQITSQALKAVNL 440
           ATH+S+PSKR+LV+F GPG +KV+ IR IAGQIVNKD+LTGLIL++QNQIT+QA+KAV+L
Sbjct: 91  ATHTSDPSKRMLVLFGGPGIIKVSTIRAIAGQIVNKDSLTGLILVLQNQITNQAMKAVDL 150

Query: 441 LNFKVEIFQITDLLVNITKHVLKPKHQVLTDRQKQNLLKKYNIEEKQLPRMLQTDAIARY 620
             FKVE+FQITDLLVNITKHVLKPKHQVLTDR+KQ LLK Y IEEKQLPR+L+ DAIARY
Sbjct: 151 FKFKVEMFQITDLLVNITKHVLKPKHQVLTDREKQKLLKDYCIEEKQLPRLLRKDAIARY 210

Query: 621 YGLERGQVVKVTYSGEITQMHVTYRCVW 704
           YGLE+GQVVKVTYSGEIT+ HVTYRCVW
Sbjct: 211 YGLEKGQVVKVTYSGEITESHVTYRCVW 238


>ref|XP_004136650.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
           RPABC1-like [Cucumis sativus]
           gi|449524637|ref|XP_004169328.1| PREDICTED: DNA-directed
           RNA polymerases I, II, and III subunit RPABC1-like
           [Cucumis sativus]
          Length = 227

 Score =  310 bits (794), Expect = 3e-82
 Identities = 152/209 (72%), Positives = 179/209 (85%)
 Frame = +3

Query: 78  ISTEKEEGSIESHRYYLSRRTTLEMLKDRGYSIPSSETNLSLSEFRAIHGHSPDVDRLRF 257
           +S+  ++G+ ESHRY+LSRRT +EMLKDRGY+I S   + SL +FR   G  PDVDRL+ 
Sbjct: 19  LSSYIDDGTTESHRYFLSRRTVVEMLKDRGYTINSPNIDFSLQQFRETFGQFPDVDRLKL 78

Query: 258 SATHSSNPSKRVLVIFTGPGAVKVNAIRNIAGQIVNKDTLTGLILIVQNQITSQALKAVN 437
           SA H S+PSKRVLV+F G GAVKVNAIRNIAGQI NKD+L GLILIVQNQIT+QA+KAV 
Sbjct: 79  SAAHHSDPSKRVLVVFCGTGAVKVNAIRNIAGQIANKDSLHGLILIVQNQITNQAMKAVE 138

Query: 438 LLNFKVEIFQITDLLVNITKHVLKPKHQVLTDRQKQNLLKKYNIEEKQLPRMLQTDAIAR 617
           L +FKVEIFQITDLLVNITKH LKP HQVLT+ +KQ LLK+Y+IEEKQLPRML+TDAIAR
Sbjct: 139 LFSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLKQYSIEEKQLPRMLRTDAIAR 198

Query: 618 YYGLERGQVVKVTYSGEITQMHVTYRCVW 704
           YYGLE+GQVVKVTY G++T+ H+TYRCVW
Sbjct: 199 YYGLEKGQVVKVTYDGDMTRAHITYRCVW 227