BLASTX nr result

ID: Glycyrrhiza23_contig00016370 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00016370
         (301 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003622361.1| PHD finger protein [Medicago truncatula] gi|...    94   9e-18
ref|XP_003555537.1| PREDICTED: PHD finger protein At1g33420-like...    91   1e-16
ref|XP_003536185.1| PREDICTED: PHD finger protein At1g33420-like...    90   2e-16
ref|XP_002267837.1| PREDICTED: PHD finger protein At1g33420 [Vit...    70   2e-10
ref|XP_002325292.1| predicted protein [Populus trichocarpa] gi|2...    69   3e-10

>ref|XP_003622361.1| PHD finger protein [Medicago truncatula]
           gi|355497376|gb|AES78579.1| PHD finger protein [Medicago
           truncatula]
          Length = 797

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 48/62 (77%), Positives = 53/62 (85%)
 Frame = -1

Query: 187 MVVSGGKPLKRMKRRVTADFYDXXXXXXXSLAASENFSGGPFRTNVRSFLTKHALLPPPS 8
           MVVSGGK LKRMKRRVTAD++D       SLAASE+FSGGPFR+NV SFLTK+ALLPPPS
Sbjct: 1   MVVSGGKSLKRMKRRVTADYHDFFSFPSPSLAASESFSGGPFRSNVHSFLTKYALLPPPS 60

Query: 7   AL 2
           AL
Sbjct: 61  AL 62


>ref|XP_003555537.1| PREDICTED: PHD finger protein At1g33420-like [Glycine max]
          Length = 699

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 47/63 (74%), Positives = 52/63 (82%), Gaps = 1/63 (1%)
 Frame = -1

Query: 187 MVVSGGKPLKRM-KRRVTADFYDXXXXXXXSLAASENFSGGPFRTNVRSFLTKHALLPPP 11
           MVVSGGK LKR  K+RVTADFYD       +LA SENF+GGPFR+NVR+FLTKHALLPPP
Sbjct: 1   MVVSGGKGLKRAAKKRVTADFYDFLTFPTPALAESENFAGGPFRSNVRAFLTKHALLPPP 60

Query: 10  SAL 2
           SAL
Sbjct: 61  SAL 63


>ref|XP_003536185.1| PREDICTED: PHD finger protein At1g33420-like [Glycine max]
          Length = 707

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 47/63 (74%), Positives = 52/63 (82%), Gaps = 1/63 (1%)
 Frame = -1

Query: 187 MVVSGGKPLKRM-KRRVTADFYDXXXXXXXSLAASENFSGGPFRTNVRSFLTKHALLPPP 11
           MVVSGGK LKR  K+RVTADFYD       SLA +ENF+GGPFR+NVR+FLTKHALLPPP
Sbjct: 1   MVVSGGKGLKRAAKKRVTADFYDFLTFPTPSLAEAENFAGGPFRSNVRAFLTKHALLPPP 60

Query: 10  SAL 2
           SAL
Sbjct: 61  SAL 63


>ref|XP_002267837.1| PREDICTED: PHD finger protein At1g33420 [Vitis vinifera]
           gi|296084820|emb|CBI27702.3| unnamed protein product
           [Vitis vinifera]
          Length = 692

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 35/61 (57%), Positives = 43/61 (70%)
 Frame = -1

Query: 184 VVSGGKPLKRMKRRVTADFYDXXXXXXXSLAASENFSGGPFRTNVRSFLTKHALLPPPSA 5
           +V  G+P+KRMK RVTAD YD          A+ +F+ GPFRT V+SFLTKHALLPPP +
Sbjct: 1   MVVNGRPMKRMKMRVTADLYDFLA-----FPAAGDFAEGPFRTTVKSFLTKHALLPPPGS 55

Query: 4   L 2
           L
Sbjct: 56  L 56


>ref|XP_002325292.1| predicted protein [Populus trichocarpa] gi|222862167|gb|EEE99673.1|
           predicted protein [Populus trichocarpa]
          Length = 679

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 35/67 (52%), Positives = 46/67 (68%), Gaps = 6/67 (8%)
 Frame = -1

Query: 184 VVSGGKPLKRMKRRVTADFYDXXXXXXXSLAASENFSG------GPFRTNVRSFLTKHAL 23
           +V  G+P+KRMKRRVTAD Y+         ++S + S       GPFR+N+RSFLT+HAL
Sbjct: 1   MVVNGRPIKRMKRRVTADLYNFLSFPSSPSSSSSSSSSSPPPPRGPFRSNIRSFLTEHAL 60

Query: 22  LPPPSAL 2
           LPPPS+L
Sbjct: 61  LPPPSSL 67


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