BLASTX nr result

ID: Glycyrrhiza23_contig00016350 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00016350
         (456 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003532008.1| PREDICTED: proteasome subunit beta type-1-li...   112   2e-23
ref|XP_003616394.1| Proteasome subunit beta type [Medicago trunc...   112   3e-23
gb|AFK36140.1| unknown [Medicago truncatula]                          109   2e-22
ref|XP_003597434.1| Proteasome subunit beta type [Medicago trunc...   109   2e-22
gb|AFK41008.1| unknown [Lotus japonicus]                              108   3e-22

>ref|XP_003532008.1| PREDICTED: proteasome subunit beta type-1-like [Glycine max]
          Length = 223

 Score =  112 bits (281), Expect = 2e-23
 Identities = 59/69 (85%), Positives = 61/69 (88%)
 Frame = -1

Query: 456 LDNQLKXXXXXXXPAKDAVTPLSETEAVDLVKTVFASATERDIYTGDKVEIVILNASGIH 277
           LDNQLK       PA+DAVTPLSE EAVDLVKTVFASATERDIYTGDKVEIVILNASGIH
Sbjct: 155 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTVFASATERDIYTGDKVEIVILNASGIH 214

Query: 276 RQYMDLRKD 250
           R+YMDLRKD
Sbjct: 215 REYMDLRKD 223


>ref|XP_003616394.1| Proteasome subunit beta type [Medicago truncatula]
           gi|355517729|gb|AES99352.1| Proteasome subunit beta type
           [Medicago truncatula]
          Length = 223

 Score =  112 bits (280), Expect = 3e-23
 Identities = 59/69 (85%), Positives = 61/69 (88%)
 Frame = -1

Query: 456 LDNQLKXXXXXXXPAKDAVTPLSETEAVDLVKTVFASATERDIYTGDKVEIVILNASGIH 277
           LDNQLK       PA+DAVTPLSETEAVDLVKTVFASATERDIYTGDKVEIVILNASGIH
Sbjct: 155 LDNQLKSPSPLLLPAQDAVTPLSETEAVDLVKTVFASATERDIYTGDKVEIVILNASGIH 214

Query: 276 RQYMDLRKD 250
           R +MDLRKD
Sbjct: 215 RDFMDLRKD 223


>gb|AFK36140.1| unknown [Medicago truncatula]
          Length = 237

 Score =  109 bits (273), Expect = 2e-22
 Identities = 61/83 (73%), Positives = 66/83 (79%)
 Frame = -1

Query: 456 LDNQLKXXXXXXXPAKDAVTPLSETEAVDLVKTVFASATERDIYTGDKVEIVILNASGIH 277
           LDNQLK       PA+DAVTPLSE EAVDLVKTVFASATERDIYTGDKVEIVILNA GIH
Sbjct: 155 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTVFASATERDIYTGDKVEIVILNAGGIH 214

Query: 276 RQYMDLRKD*CFLHKFI*FMPDL 208
           R++MDLRK   F  + + FM DL
Sbjct: 215 REFMDLRKTDAFTEECM-FMIDL 236


>ref|XP_003597434.1| Proteasome subunit beta type [Medicago truncatula]
           gi|355486482|gb|AES67685.1| Proteasome subunit beta type
           [Medicago truncatula]
          Length = 231

 Score =  109 bits (273), Expect = 2e-22
 Identities = 57/69 (82%), Positives = 60/69 (86%)
 Frame = -1

Query: 456 LDNQLKXXXXXXXPAKDAVTPLSETEAVDLVKTVFASATERDIYTGDKVEIVILNASGIH 277
           LDNQLK       PA+DAVTPLSE EAVDLVKTVFASATERDIYTGDKVEIVILNA GIH
Sbjct: 163 LDNQLKSPSPLLLPAQDAVTPLSEAEAVDLVKTVFASATERDIYTGDKVEIVILNAGGIH 222

Query: 276 RQYMDLRKD 250
           R++MDLRKD
Sbjct: 223 REFMDLRKD 231


>gb|AFK41008.1| unknown [Lotus japonicus]
          Length = 223

 Score =  108 bits (271), Expect = 3e-22
 Identities = 57/69 (82%), Positives = 61/69 (88%)
 Frame = -1

Query: 456 LDNQLKXXXXXXXPAKDAVTPLSETEAVDLVKTVFASATERDIYTGDKVEIVILNASGIH 277
           LDNQLK       PA+DAVTPLSETEAVDLVKTVFASATERDIYTGDK+EIVILNASGI 
Sbjct: 155 LDNQLKSPSPLLLPAQDAVTPLSETEAVDLVKTVFASATERDIYTGDKLEIVILNASGIR 214

Query: 276 RQYMDLRKD 250
           R+YM+LRKD
Sbjct: 215 REYMELRKD 223


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