BLASTX nr result

ID: Glycyrrhiza23_contig00016345 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00016345
         (430 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003556854.1| PREDICTED: RING-H2 zinc finger protein RHA4a...   176   2e-42
ref|XP_003543993.1| PREDICTED: RING-H2 zinc finger protein RHA4a...   160   8e-38
ref|XP_003524431.1| PREDICTED: RING-H2 zinc finger protein RHA4a...   153   1e-35
ref|XP_003530445.1| PREDICTED: RING-H2 zinc finger protein RHA4a...   152   3e-35
ref|XP_002518854.1| ring finger protein, putative [Ricinus commu...   132   3e-29

>ref|XP_003556854.1| PREDICTED: RING-H2 zinc finger protein RHA4a-like [Glycine max]
          Length = 211

 Score =  176 bits (446), Expect = 2e-42
 Identities = 88/138 (63%), Positives = 93/138 (67%), Gaps = 3/138 (2%)
 Frame = +3

Query: 24  SPPPHLYPQELQIKLYQAXXXXXXXXXXXXXXXXXXXXXXKRRASS---SXXXXXXXXXX 194
           SPPPHLYPQELQ+KLYQA                      KRRASS   S          
Sbjct: 9   SPPPHLYPQELQLKLYQAFIFSIPILFSIILFLLFYLFYLKRRASSLSSSSHLLPRTIAN 68

Query: 195 XXXXYRYHSSPCRLDLTVQFLDNLPRILFDEDLQARDPLCCVCLGEFEVKEEVLQIPYCK 374
                 YHSSPCRLDLT+QFLD LPRILFDEDL ARD LCCVCLGEFE+KEEVLQIPYCK
Sbjct: 69  PPTTTPYHSSPCRLDLTLQFLDKLPRILFDEDLLARDSLCCVCLGEFELKEEVLQIPYCK 128

Query: 375 HVFHIDCIHHWLQSNTTC 428
           HVFH +CIHHWLQSN+TC
Sbjct: 129 HVFHFECIHHWLQSNSTC 146


>ref|XP_003543993.1| PREDICTED: RING-H2 zinc finger protein RHA4a-like [Glycine max]
          Length = 214

 Score =  160 bits (406), Expect = 8e-38
 Identities = 79/138 (57%), Positives = 89/138 (64%), Gaps = 3/138 (2%)
 Frame = +3

Query: 24  SPPPHLYPQELQIKLYQAXXXXXXXXXXXXXXXXXXXXXXKRRASS---SXXXXXXXXXX 194
           SPPPHLYPQELQ+KLYQ                       KRRASS   +          
Sbjct: 9   SPPPHLYPQELQLKLYQTFIFSIPILFSIILFLLFYLFYLKRRASSLSSTPHLLPRTIAN 68

Query: 195 XXXXYRYHSSPCRLDLTVQFLDNLPRILFDEDLQARDPLCCVCLGEFEVKEEVLQIPYCK 374
                 +   PCRLDLT+ FLD LPRILFDEDL ARD LCCVCLGEFE+KEE++QIPYCK
Sbjct: 69  PPTTSSHIPQPCRLDLTLHFLDKLPRILFDEDLLARDSLCCVCLGEFELKEELVQIPYCK 128

Query: 375 HVFHIDCIHHWLQSNTTC 428
           HVFH++CIHHWLQSN+TC
Sbjct: 129 HVFHLECIHHWLQSNSTC 146


>ref|XP_003524431.1| PREDICTED: RING-H2 zinc finger protein RHA4a-like [Glycine max]
          Length = 206

 Score =  153 bits (387), Expect = 1e-35
 Identities = 79/139 (56%), Positives = 87/139 (62%), Gaps = 5/139 (3%)
 Frame = +3

Query: 27  PPP--HLYPQELQIKLYQAXXXXXXXXXXXXXXXXXXXXXXKRRASS---SXXXXXXXXX 191
           PPP  HLYPQE+Q+KLYQA                      KRRASS             
Sbjct: 7   PPPSQHLYPQEIQLKLYQAFIFSIPILFSIILVLLFYLFYLKRRASSLSSPPLHILPSTT 66

Query: 192 XXXXXYRYHSSPCRLDLTVQFLDNLPRILFDEDLQARDPLCCVCLGEFEVKEEVLQIPYC 371
                Y Y S PCRLDL VQFLD LPRILFDEDL+  D +CCVCLGEFE+KEE+LQIPYC
Sbjct: 67  NSQTTYPYPSQPCRLDLAVQFLDKLPRILFDEDLRTGDSVCCVCLGEFELKEELLQIPYC 126

Query: 372 KHVFHIDCIHHWLQSNTTC 428
           KHVFHI CI +WLQSN+TC
Sbjct: 127 KHVFHISCISNWLQSNSTC 145


>ref|XP_003530445.1| PREDICTED: RING-H2 zinc finger protein RHA4a-like [Glycine max]
          Length = 209

 Score =  152 bits (384), Expect = 3e-35
 Identities = 78/140 (55%), Positives = 87/140 (62%), Gaps = 6/140 (4%)
 Frame = +3

Query: 27  PPP--HLYPQELQIKLYQAXXXXXXXXXXXXXXXXXXXXXXKRRASS----SXXXXXXXX 188
           PPP  HLYPQE+Q+KLYQA                      KRRASS             
Sbjct: 7   PPPSQHLYPQEIQLKLYQAFIFSIPILFSIILVLLFYLFYLKRRASSLSSPPLHILPSTS 66

Query: 189 XXXXXXYRYHSSPCRLDLTVQFLDNLPRILFDEDLQARDPLCCVCLGEFEVKEEVLQIPY 368
                 Y Y + PCRLDLTVQFLD LPRILFDEDL+ RD +CCVCLGEFE+ EE+LQIPY
Sbjct: 67  TDPQTAYPYSTQPCRLDLTVQFLDKLPRILFDEDLRTRDSVCCVCLGEFELNEELLQIPY 126

Query: 369 CKHVFHIDCIHHWLQSNTTC 428
           C HVFHI CI +WLQSN+TC
Sbjct: 127 CNHVFHISCICNWLQSNSTC 146


>ref|XP_002518854.1| ring finger protein, putative [Ricinus communis]
           gi|223541841|gb|EEF43387.1| ring finger protein,
           putative [Ricinus communis]
          Length = 265

 Score =  132 bits (332), Expect = 3e-29
 Identities = 66/135 (48%), Positives = 78/135 (57%)
 Frame = +3

Query: 24  SPPPHLYPQELQIKLYQAXXXXXXXXXXXXXXXXXXXXXXKRRASSSXXXXXXXXXXXXX 203
           SP  HLYPQ LQ+KLYQA                      KRRA+S              
Sbjct: 8   SPNAHLYPQALQLKLYQAFIFSIPILFSIILFLLFYLFYLKRRATSLSSPSQVLPTSSNQ 67

Query: 204 XYRYHSSPCRLDLTVQFLDNLPRILFDEDLQARDPLCCVCLGEFEVKEEVLQIPYCKHVF 383
             +   S C++ L  +  D LP +LFDEDL+ R+  CCVCLGEFE+KEE+LQIP CKHVF
Sbjct: 68  AAQQLPSVCQIGLKKEIKDKLPIVLFDEDLKTRESQCCVCLGEFEMKEELLQIPSCKHVF 127

Query: 384 HIDCIHHWLQSNTTC 428
           HI+CIHHWL SNTTC
Sbjct: 128 HIECIHHWLHSNTTC 142


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