BLASTX nr result

ID: Glycyrrhiza23_contig00016284 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00016284
         (467 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003544671.1| PREDICTED: uncharacterized protein LOC100809...    90   2e-16
ref|NP_001237269.1| VHS and GAT domain protein [Glycine max] gi|...    89   5e-16
ref|XP_003522697.1| PREDICTED: TOM1-like protein 1-like [Glycine...    77   1e-12
ref|XP_003526479.1| PREDICTED: TOM1-like protein 1-like [Glycine...    75   6e-12
ref|XP_002298784.1| predicted protein [Populus trichocarpa] gi|2...    71   8e-11

>ref|XP_003544671.1| PREDICTED: uncharacterized protein LOC100809022 [Glycine max]
          Length = 672

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 50/88 (56%), Positives = 53/88 (60%)
 Frame = -3

Query: 390 EQQMYGMSIRDDSGLRNSNQVSTTSYVPSGRPSKPEDKLXXXXXXXXXXXXXXXXXXXXX 211
           E+QMYGMS+RDDS LRN  Q STTSYVPSG+PSKPEDKL                     
Sbjct: 612 ERQMYGMSVRDDSSLRNPYQASTTSYVPSGKPSKPEDKL--------------------- 650

Query: 210 XXXXXXXXXXVDMAKVKPKPTPGRAGSM 127
                     VDMAKVKPKPTPGRAGSM
Sbjct: 651 ------FGDLVDMAKVKPKPTPGRAGSM 672


>ref|NP_001237269.1| VHS and GAT domain protein [Glycine max] gi|82791812|gb|ABB90835.1|
           VHS and GAT domain protein [Glycine max]
          Length = 672

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 49/88 (55%), Positives = 52/88 (59%)
 Frame = -3

Query: 390 EQQMYGMSIRDDSGLRNSNQVSTTSYVPSGRPSKPEDKLXXXXXXXXXXXXXXXXXXXXX 211
           E+QMYGMS+RDDS LRN  Q STTSY PSG+PSKPEDKL                     
Sbjct: 612 ERQMYGMSVRDDSSLRNPYQASTTSYAPSGKPSKPEDKL--------------------- 650

Query: 210 XXXXXXXXXXVDMAKVKPKPTPGRAGSM 127
                     VDMAKVKPKPTPGRAGSM
Sbjct: 651 ------FGDLVDMAKVKPKPTPGRAGSM 672


>ref|XP_003522697.1| PREDICTED: TOM1-like protein 1-like [Glycine max]
          Length = 666

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 44/88 (50%), Positives = 50/88 (56%)
 Frame = -3

Query: 390 EQQMYGMSIRDDSGLRNSNQVSTTSYVPSGRPSKPEDKLXXXXXXXXXXXXXXXXXXXXX 211
           EQQMYG+S+RDD  LRNSNQVS+TSYVP G+PSKPED+L                     
Sbjct: 606 EQQMYGLSVRDDGALRNSNQVSSTSYVPPGKPSKPEDEL--------------------- 644

Query: 210 XXXXXXXXXXVDMAKVKPKPTPGRAGSM 127
                     V+MAKVKPK TP   GSM
Sbjct: 645 ------FGDLVNMAKVKPKFTPDPTGSM 666


>ref|XP_003526479.1| PREDICTED: TOM1-like protein 1-like [Glycine max]
          Length = 666

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 42/88 (47%), Positives = 49/88 (55%)
 Frame = -3

Query: 390 EQQMYGMSIRDDSGLRNSNQVSTTSYVPSGRPSKPEDKLXXXXXXXXXXXXXXXXXXXXX 211
           EQQMYG+S+RDD   +NS QVS+ SYVP G+PSKPEDKL                     
Sbjct: 606 EQQMYGLSVRDDGAPKNSYQVSSPSYVPPGKPSKPEDKL--------------------- 644

Query: 210 XXXXXXXXXXVDMAKVKPKPTPGRAGSM 127
                     V+MAKVKPKPTP + GSM
Sbjct: 645 ------FGDLVNMAKVKPKPTPDQTGSM 666


>ref|XP_002298784.1| predicted protein [Populus trichocarpa]
           gi|224092316|ref|XP_002309555.1| predicted protein
           [Populus trichocarpa] gi|222846042|gb|EEE83589.1|
           predicted protein [Populus trichocarpa]
           gi|222855531|gb|EEE93078.1| predicted protein [Populus
           trichocarpa]
          Length = 159

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 43/90 (47%), Positives = 54/90 (60%), Gaps = 2/90 (2%)
 Frame = -3

Query: 390 EQQMYGMSIRDDSGLRNSN-QVSTTSYVPSGRPSKPEDKLXXXXXXXXXXXXXXXXXXXX 214
           +Q+M+G+S+RDD+GLRNS+ QV T+SYVPSG+PSKPEDKL                    
Sbjct: 97  DQRMHGLSVRDDNGLRNSSYQVPTSSYVPSGKPSKPEDKL-------------------- 136

Query: 213 XXXXXXXXXXXVDMAKVKP-KPTPGRAGSM 127
                      VD++K KP K TPGRAGSM
Sbjct: 137 -------FGDLVDISKFKPGKSTPGRAGSM 159


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