BLASTX nr result

ID: Glycyrrhiza23_contig00016276 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00016276
         (1483 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003622992.1| RAD50-interacting protein [Medicago truncatu...   711   0.0  
ref|XP_003524045.1| PREDICTED: RINT1-like protein-like [Glycine ...   704   0.0  
ref|XP_003532305.1| PREDICTED: RINT1-like protein-like [Glycine ...   698   0.0  
ref|XP_002330095.1| predicted protein [Populus trichocarpa] gi|2...   566   e-159
ref|XP_004159937.1| PREDICTED: RINT1-like protein-like [Cucumis ...   558   e-156

>ref|XP_003622992.1| RAD50-interacting protein [Medicago truncatula]
            gi|355498007|gb|AES79210.1| RAD50-interacting protein
            [Medicago truncatula]
          Length = 801

 Score =  711 bits (1835), Expect = 0.0
 Identities = 365/454 (80%), Positives = 399/454 (87%), Gaps = 1/454 (0%)
 Frame = +3

Query: 123  MERLETLPPPSNLSHSALSFLDHKFRTERALAEAPTSVSELQTQCSELDRALSELTRRLG 302
            M RL+TLP PS+LSHSAL+FLDH F T   L E+P  V+ELQTQCSELDRAL +LTRRLG
Sbjct: 1    MNRLQTLPLPSHLSHSALTFLDHNFHTATVLTESPNFVAELQTQCSELDRALDDLTRRLG 60

Query: 303  AGLASYASFSGEFHRLSDGVSDRLNALTSTCSSSVVPXXXXXXXXXXXXXXXXXDLATLA 482
            AGLA YASFSGE H L DGV  +LN +++TCSSS+VP                 +LATLA
Sbjct: 61   AGLAKYASFSGEIHSLFDGVKFKLNEISATCSSSIVPDGGRCEGDGKGEKGFREELATLA 120

Query: 483  KEVARLETVRVYAETAMKLDTLVGDIEDAVSYTMS-KNIRKHSSDQNSEEMRMLAIKTLK 659
            KEVARLETVRVYAETA+KLDTLVGDIEDAVSYTMS KNIRKHSSD+NS +MR+ AIK LK
Sbjct: 121  KEVARLETVRVYAETALKLDTLVGDIEDAVSYTMSNKNIRKHSSDENSGDMRLFAIKKLK 180

Query: 660  ATEEILTSITKVHPQWKHLVSAVDHRVDRALAILRPQAIADHRALLASLGWPPPLSALTS 839
             TEE LTSIT +HPQW++LVSAVDHRVDRALAILRPQAIADHRALL+SLGWPPPLSALTS
Sbjct: 181  MTEETLTSITNIHPQWRNLVSAVDHRVDRALAILRPQAIADHRALLSSLGWPPPLSALTS 240

Query: 840  SHSDARIADQVLNPLLSMQADHKLKYSENFLALCNLQELQRQRKSRQLEGHDREVALRQP 1019
            SHSDARIA    NPL SM ADHKL+YSENFLALCNLQELQR+RKSRQL GHDRE+ALRQP
Sbjct: 241  SHSDARIA----NPLQSMHADHKLRYSENFLALCNLQELQRKRKSRQLVGHDREIALRQP 296

Query: 1020 LWVIEELVNPLSLASQRHFSKWVDKPEFIFTLVYKITRDYVDSMDEMLQPLVDEAKVVGY 1199
            LW IEELVNPLSLAS++HFSKWVDKPEFIFTLVYKITRDYVDS+DEMLQPLVDEAKVVGY
Sbjct: 297  LWAIEELVNPLSLASEKHFSKWVDKPEFIFTLVYKITRDYVDSVDEMLQPLVDEAKVVGY 356

Query: 1200 SCREEWISAMVTSLSTHLAKEIFPSYITHLDEESVTGIQSSARISWLHLIDLMIAFDKRI 1379
            SCREEWISAMVTSLST+LAKEIFPSYIT L+EES+TGIQSS+RISWLHLIDLMIAFDK+I
Sbjct: 357  SCREEWISAMVTSLSTYLAKEIFPSYITQLEEESITGIQSSSRISWLHLIDLMIAFDKKI 416

Query: 1380 KSLVEHSGISVSFDDDVILQRISSLSVFCDRPDW 1481
             SLVE+SG+ +S DDD ILQRISSLSVFCDRPDW
Sbjct: 417  MSLVENSGVLLSLDDD-ILQRISSLSVFCDRPDW 449


>ref|XP_003524045.1| PREDICTED: RINT1-like protein-like [Glycine max]
          Length = 796

 Score =  704 bits (1817), Expect = 0.0
 Identities = 369/453 (81%), Positives = 402/453 (88%)
 Frame = +3

Query: 123  MERLETLPPPSNLSHSALSFLDHKFRTERALAEAPTSVSELQTQCSELDRALSELTRRLG 302
            ME L+TLPP S++S SALSFLDH+  T+ A+AEAPT  +ELQTQCSELDR+L ELTRRLG
Sbjct: 1    MEWLQTLPPSSHISPSALSFLDHRLHTQLAVAEAPTFAAELQTQCSELDRSLDELTRRLG 60

Query: 303  AGLASYASFSGEFHRLSDGVSDRLNALTSTCSSSVVPXXXXXXXXXXXXXXXXXDLATLA 482
            AGL++YASFSGE H L   V+DRL AL+ST    VVP                 +LATLA
Sbjct: 61   AGLSAYASFSGEIHGLFGAVTDRLVALSST----VVPDGGRGEGDGKGFRE---ELATLA 113

Query: 483  KEVARLETVRVYAETAMKLDTLVGDIEDAVSYTMSKNIRKHSSDQNSEEMRMLAIKTLKA 662
            KEVARLETVRVYAE A+KLDTLVGDIEDAVS+TMSKNIRKHSS QNS+EM MLAIKTLK 
Sbjct: 114  KEVARLETVRVYAEKALKLDTLVGDIEDAVSFTMSKNIRKHSS-QNSQEMHMLAIKTLKT 172

Query: 663  TEEILTSITKVHPQWKHLVSAVDHRVDRALAILRPQAIADHRALLASLGWPPPLSALTSS 842
            TE+ILTSITK HPQWKHLVSAVDHRVDRALAILRPQAIA+HRALL SLGWPPPLSALTSS
Sbjct: 173  TEDILTSITKAHPQWKHLVSAVDHRVDRALAILRPQAIAEHRALLTSLGWPPPLSALTSS 232

Query: 843  HSDARIADQVLNPLLSMQADHKLKYSENFLALCNLQELQRQRKSRQLEGHDREVALRQPL 1022
            +SDA  A+QV+NPLLSM  D K++YSENFLALCNLQELQRQRK+RQLEGHDREVALRQPL
Sbjct: 233  NSDASTANQVVNPLLSMHVDLKVQYSENFLALCNLQELQRQRKARQLEGHDREVALRQPL 292

Query: 1023 WVIEELVNPLSLASQRHFSKWVDKPEFIFTLVYKITRDYVDSMDEMLQPLVDEAKVVGYS 1202
            WVIEELVNPLSLASQRHFSKWVDKPEFIFTLVYKITRDYVDSMDE+LQPLVDEAK++GYS
Sbjct: 293  WVIEELVNPLSLASQRHFSKWVDKPEFIFTLVYKITRDYVDSMDELLQPLVDEAKLLGYS 352

Query: 1203 CREEWISAMVTSLSTHLAKEIFPSYITHLDEESVTGIQSSARISWLHLIDLMIAFDKRIK 1382
            CREEWISAMVTSL+T+LAKEIFPSYI+ LD ESVTGIQSSARISWLHLIDLMIAFDKRIK
Sbjct: 353  CREEWISAMVTSLTTYLAKEIFPSYISQLDGESVTGIQSSARISWLHLIDLMIAFDKRIK 412

Query: 1383 SLVEHSGISVSFDDDVILQRISSLSVFCDRPDW 1481
            SLVEHSGI +SFDDD I+Q+ISSLSVFCDRPDW
Sbjct: 413  SLVEHSGILLSFDDD-IMQKISSLSVFCDRPDW 444


>ref|XP_003532305.1| PREDICTED: RINT1-like protein-like [Glycine max]
          Length = 796

 Score =  698 bits (1801), Expect = 0.0
 Identities = 369/453 (81%), Positives = 398/453 (87%)
 Frame = +3

Query: 123  MERLETLPPPSNLSHSALSFLDHKFRTERALAEAPTSVSELQTQCSELDRALSELTRRLG 302
            ME L+TLPPPS+LS SALSFLDH+  T+ ALAEAPT V+ELQTQCSELDR+L ELTR LG
Sbjct: 1    MEWLQTLPPPSHLSPSALSFLDHRLHTQLALAEAPTFVAELQTQCSELDRSLDELTRLLG 60

Query: 303  AGLASYASFSGEFHRLSDGVSDRLNALTSTCSSSVVPXXXXXXXXXXXXXXXXXDLATLA 482
            AGLA+Y SFSGE H L   V++RL AL+ST    VVP                 +LATLA
Sbjct: 61   AGLAAYTSFSGEIHGLFGDVTERLIALSST----VVPDGGRGEEDGKGFRE---ELATLA 113

Query: 483  KEVARLETVRVYAETAMKLDTLVGDIEDAVSYTMSKNIRKHSSDQNSEEMRMLAIKTLKA 662
            KEVARLETVRVYAETA+KLDTLVGDIEDAVS+TMSKNIRKHSS QNS+EM MLAIKTLK 
Sbjct: 114  KEVARLETVRVYAETALKLDTLVGDIEDAVSFTMSKNIRKHSS-QNSQEMHMLAIKTLKT 172

Query: 663  TEEILTSITKVHPQWKHLVSAVDHRVDRALAILRPQAIADHRALLASLGWPPPLSALTSS 842
            TE ILTSITK HPQWKHLVSAVDHRVDRALAILRPQAIA+HRALLASLGWPPPL AL S 
Sbjct: 173  TEGILTSITKAHPQWKHLVSAVDHRVDRALAILRPQAIAEHRALLASLGWPPPLFALNSL 232

Query: 843  HSDARIADQVLNPLLSMQADHKLKYSENFLALCNLQELQRQRKSRQLEGHDREVALRQPL 1022
             SDAR A+QV NPLL+MQ D K++YSENFLALCNLQELQRQRK+RQLEGHDREVALRQ L
Sbjct: 233  DSDARTANQVANPLLTMQVDLKVQYSENFLALCNLQELQRQRKARQLEGHDREVALRQSL 292

Query: 1023 WVIEELVNPLSLASQRHFSKWVDKPEFIFTLVYKITRDYVDSMDEMLQPLVDEAKVVGYS 1202
            WVIEELVNPLSLASQRHFSKWVDKPEFIFTLVYKITRDYVDSMDE+LQPLVDEAK++GYS
Sbjct: 293  WVIEELVNPLSLASQRHFSKWVDKPEFIFTLVYKITRDYVDSMDELLQPLVDEAKLLGYS 352

Query: 1203 CREEWISAMVTSLSTHLAKEIFPSYITHLDEESVTGIQSSARISWLHLIDLMIAFDKRIK 1382
            CREEWISAMVTSL+T+LAKEIFPSYI+ LDEESV GIQSSARISWLHLIDL IAFDKRIK
Sbjct: 353  CREEWISAMVTSLTTYLAKEIFPSYISQLDEESVIGIQSSARISWLHLIDLTIAFDKRIK 412

Query: 1383 SLVEHSGISVSFDDDVILQRISSLSVFCDRPDW 1481
            SLVEHSGI +SFDDD I+Q+ISSLSVFCDRPDW
Sbjct: 413  SLVEHSGILLSFDDD-IMQKISSLSVFCDRPDW 444


>ref|XP_002330095.1| predicted protein [Populus trichocarpa] gi|222871229|gb|EEF08360.1|
            predicted protein [Populus trichocarpa]
          Length = 804

 Score =  566 bits (1459), Expect = e-159
 Identities = 293/449 (65%), Positives = 350/449 (77%), Gaps = 1/449 (0%)
 Frame = +3

Query: 138  TLPPPSNLSHSALSFLDHKFRTERALAEAPTSVSELQTQCSELDRALSELTRRLGAGLAS 317
            TLPP S+LS S LSFL+    +E+ L+ A + + ELQ+QC +LDR L +L  RL + L S
Sbjct: 8    TLPPVSSLSSSTLSFLN----SEQDLSRARSYIDELQSQCFDLDRTLIDLNSRLHSTLLS 63

Query: 318  YASFSGEFHRLSDGVSDRLNALTS-TCSSSVVPXXXXXXXXXXXXXXXXXDLATLAKEVA 494
            YASFS   H L D  + +L  L S TC   +                   +L  LAKEVA
Sbjct: 64   YASFSDGIHLLFDDATSKLTDLRSFTCPPPLSSSLSPSDGQGRREEILGEELPALAKEVA 123

Query: 495  RLETVRVYAETAMKLDTLVGDIEDAVSYTMSKNIRKHSSDQNSEEMRMLAIKTLKATEEI 674
            R+ETVRVYAETA+KLDTLVGDIEDAVS  M+K +RK+SS Q+ EEMR+LAI+ L  +E++
Sbjct: 124  RVETVRVYAETALKLDTLVGDIEDAVSSAMNKKLRKYSSTQSVEEMRLLAIERLGHSEDV 183

Query: 675  LTSITKVHPQWKHLVSAVDHRVDRALAILRPQAIADHRALLASLGWPPPLSALTSSHSDA 854
            L S+T+ HPQW  LVSAVDHR+DRALA LRPQAIADHR+LL SLGWPPPLS LTSS+ DA
Sbjct: 184  LISVTETHPQWTSLVSAVDHRIDRALATLRPQAIADHRSLLGSLGWPPPLSTLTSSNLDA 243

Query: 855  RIADQVLNPLLSMQADHKLKYSENFLALCNLQELQRQRKSRQLEGHDREVALRQPLWVIE 1034
              + +V NPL +MQ   K +Y ENFLALC+LQELQ +RKSRQLEGH+R+VAL+QPLW IE
Sbjct: 244  GKSAEVSNPLFTMQGLLKQQYCENFLALCHLQELQWRRKSRQLEGHNRKVALQQPLWAIE 303

Query: 1035 ELVNPLSLASQRHFSKWVDKPEFIFTLVYKITRDYVDSMDEMLQPLVDEAKVVGYSCREE 1214
            ELVNP+S+A QRHFSKW+DKPEF+F LVYKITRDYVD+MDE+LQPLVDEA++ GYSCREE
Sbjct: 304  ELVNPISIACQRHFSKWIDKPEFVFALVYKITRDYVDTMDELLQPLVDEARLAGYSCREE 363

Query: 1215 WISAMVTSLSTHLAKEIFPSYITHLDEESVTGIQSSARISWLHLIDLMIAFDKRIKSLVE 1394
            WISAMVTSL T+LAKEIFP Y+  LD ESV+G+QS AR SWLHL+DLMIAFDK+I+SLV 
Sbjct: 364  WISAMVTSLVTYLAKEIFPKYVAELDGESVSGVQSKARFSWLHLVDLMIAFDKQIQSLVT 423

Query: 1395 HSGISVSFDDDVILQRISSLSVFCDRPDW 1481
            HSGIS+S  DD  LQ+ISSLSVFCDRPDW
Sbjct: 424  HSGISLSLQDDGNLQKISSLSVFCDRPDW 452


>ref|XP_004159937.1| PREDICTED: RINT1-like protein-like [Cucumis sativus]
          Length = 784

 Score =  558 bits (1438), Expect = e-156
 Identities = 291/457 (63%), Positives = 353/457 (77%)
 Frame = +3

Query: 111  SNLTMERLETLPPPSNLSHSALSFLDHKFRTERALAEAPTSVSELQTQCSELDRALSELT 290
            S L +E L+ LPPPSNLS S LSFLDH+   +  LA+APT V +LQ+QC EL   L +L 
Sbjct: 2    SELELE-LKALPPPSNLSPSVLSFLDHQLYNKETLAQAPTLVIDLQSQCHELSHTLIDLN 60

Query: 291  RRLGAGLASYASFSGEFHRLSDGVSDRLNALTSTCSSSVVPXXXXXXXXXXXXXXXXXDL 470
            R L   L S ++FS   H L   V+ +L  L S   S                     +L
Sbjct: 61   RSLKHTLLSQSTFSDRLHGLLGDVNGKLMGLESLTRSQ-----SSTQGVGIADGVLGKEL 115

Query: 471  ATLAKEVARLETVRVYAETAMKLDTLVGDIEDAVSYTMSKNIRKHSSDQNSEEMRMLAIK 650
            ++LAKEVAR+ETVR+YAET MKLD++VGDIEDAVS  ++KN+RK    Q+SE+ R+LAIK
Sbjct: 116  SSLAKEVARMETVRMYAETTMKLDSMVGDIEDAVSSAINKNLRK----QSSEDARLLAIK 171

Query: 651  TLKATEEILTSITKVHPQWKHLVSAVDHRVDRALAILRPQAIADHRALLASLGWPPPLSA 830
            T K TE+IL S++K  PQW HLVSAVDHRVDRALAILRPQAIADHR+LL+SLGWPPPLS 
Sbjct: 172  TFKLTEDILVSVSKTRPQWTHLVSAVDHRVDRALAILRPQAIADHRSLLSSLGWPPPLST 231

Query: 831  LTSSHSDARIADQVLNPLLSMQADHKLKYSENFLALCNLQELQRQRKSRQLEGHDREVAL 1010
            +T +  DA  + +  NPL +MQ   K +Y ENFLALC+LQE+QR+RKSRQLEG+ +EV+L
Sbjct: 232  VTVT-GDATKSTESQNPLFTMQGKLKQQYCENFLALCSLQEIQRRRKSRQLEGYSKEVSL 290

Query: 1011 RQPLWVIEELVNPLSLASQRHFSKWVDKPEFIFTLVYKITRDYVDSMDEMLQPLVDEAKV 1190
             QPLW IEELVNP+SLA+Q HFSKW+DKPEFIF L YKITRDYVDS+DE+LQPLVDEA++
Sbjct: 291  PQPLWAIEELVNPISLAAQEHFSKWIDKPEFIFILTYKITRDYVDSIDEVLQPLVDEARL 350

Query: 1191 VGYSCREEWISAMVTSLSTHLAKEIFPSYITHLDEESVTGIQSSARISWLHLIDLMIAFD 1370
            VGYSCREEWIS+MVTSLST+LAKEIFP+Y+  LDE+S  GIQS ARISWLHL+DLMI+FD
Sbjct: 351  VGYSCREEWISSMVTSLSTYLAKEIFPNYVRQLDEDSNIGIQSQARISWLHLVDLMISFD 410

Query: 1371 KRIKSLVEHSGISVSFDDDVILQRISSLSVFCDRPDW 1481
            KRIKSLVE SG+ +SFD++  LQR+SSL+VFCDRPDW
Sbjct: 411  KRIKSLVEQSGLLLSFDENGNLQRLSSLAVFCDRPDW 447


Top