BLASTX nr result
ID: Glycyrrhiza23_contig00016224
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza23_contig00016224
(1708 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003591384.1| Pentatricopeptide repeat-containing protein ... 687 0.0
ref|XP_003536865.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 665 0.0
gb|ACU24296.1| unknown [Glycine max] 663 0.0
ref|XP_004146883.1| PREDICTED: pentatricopeptide repeat-containi... 515 e-143
ref|XP_003632411.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 479 e-133
>ref|XP_003591384.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355480432|gb|AES61635.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 539
Score = 687 bits (1774), Expect = 0.0
Identities = 346/497 (69%), Positives = 404/497 (81%), Gaps = 3/497 (0%)
Frame = -3
Query: 1691 TNRRQGHRQWQDLRATEMNYXXXXXXXXXXXXXLCTEAERTE---KRPNLYRRLSELEMT 1521
T RQ + D R +EMNY LCT A E K+ NLYRRL++LE T
Sbjct: 43 TTSRQNPWRRFDHRDSEMNYSRLISGGGRLLRRLCTAATAAELPNKKANLYRRLADLEKT 102
Query: 1520 GRSVSQTLNQYIMEGKALRKGEMESCVKELRKYRRYQHALEIMEWMAMRKINFSLDDYAV 1341
G +VSQTLNQYI+EGKAL K E+E CV+ELRKYRR+ HA EIMEWM MR+INFS D+YAV
Sbjct: 103 GGTVSQTLNQYIIEGKALGKDELERCVQELRKYRRFHHAFEIMEWMMMRQINFSWDNYAV 162
Query: 1340 HLDLVSKRKGLVEAEKYFDDLPPRAKNKYTYGALLNCYCKELMADKALALFDKMNELGYV 1161
+LDLVSK KG+VEAE +F+ PP AKNKYTYG+LLNCYCKELM DKAL+ FDKM+E GY+
Sbjct: 163 YLDLVSKVKGVVEAENHFNSFPPPAKNKYTYGSLLNCYCKELMLDKALSHFDKMDEFGYL 222
Query: 1160 TSLAFTNLMSLFMRLGQPQKVPQLVHDMKQRKIPMTSFTYYVWMNSCASLNDLDGVERIY 981
TSL+FTNLMS++MRL QP KVPQLV+ MK+RKI MT FTY +WMNSCA+LNDL VER+Y
Sbjct: 223 TSLSFTNLMSMYMRLSQPSKVPQLVNVMKERKIRMTEFTYILWMNSCAALNDLGEVERVY 282
Query: 980 EEMRREDEDKIDWKTYSNLAAIYVKAGQFGKAELLLRKMEQVVKPHDREAYHCLLSLYAG 801
EEM+REDEDKIDWKTYSNLAAIY+KAG F KAEL+L+K+E V+KP RE YH LLSLYAG
Sbjct: 283 EEMKREDEDKIDWKTYSNLAAIYIKAGFFEKAELMLKKVEGVMKPRQRETYHFLLSLYAG 342
Query: 800 TGNRGEVDRVWKSLKSVSPVTNRSYLIMLSTLRKLNDMEGLTKCFKEWESRHVSYDLRLT 621
TGN EV RVW +LK ++PVTNRSYLIMLS LR+LNDMEG+ K FKEWESRHVSYD RL
Sbjct: 343 TGNVKEVYRVWGTLKKITPVTNRSYLIMLSNLRRLNDMEGIIKLFKEWESRHVSYDSRLV 402
Query: 620 RVAVSAYLSQNMNEEAASVFEEAIRRSKGPFFKIREMFMMFFLEKGQLDGAVSHLEDALS 441
VAV AYLSQNM++EA VFEEA++ +GPFF+IREMFM LEKGQLDGA+SHLE ALS
Sbjct: 403 GVAVQAYLSQNMDKEAVLVFEEALKSCRGPFFRIREMFMASLLEKGQLDGAMSHLEAALS 462
Query: 440 EVKDDEWRPSQQVVSAFLKYYEEETGLDGVEELAKILKAHNFDDSWLKTCIAASESSPET 261
E D +++PS QVVSAFLKYYEEET LDGV+EL+KIL++HNFD+S++KTCI ASESSP
Sbjct: 463 EASDYKYQPSPQVVSAFLKYYEEETDLDGVDELSKILRSHNFDESYIKTCITASESSPGI 522
Query: 260 QPILKEDSYLNHAHENL 210
+LKEDSY+N AHENL
Sbjct: 523 HTVLKEDSYVNQAHENL 539
>ref|XP_003536865.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g02370, mitochondrial-like [Glycine max]
Length = 593
Score = 665 bits (1715), Expect = 0.0
Identities = 328/481 (68%), Positives = 388/481 (80%)
Frame = -3
Query: 1640 MNYXXXXXXXXXXXXXLCTEAERTEKRPNLYRRLSELEMTGRSVSQTLNQYIMEGKALRK 1461
MNY LCT AE K+PNLYR LS L++TG +VSQTL+QYIMEGK ++K
Sbjct: 1 MNYARLISGGGWLLRRLCTAAETPAKKPNLYRMLSALDITGGTVSQTLDQYIMEGKVIKK 60
Query: 1460 GEMESCVKELRKYRRYQHALEIMEWMAMRKINFSLDDYAVHLDLVSKRKGLVEAEKYFDD 1281
E+E CV++LRKYRR+QHALEI+EWM +RK+NFS +YAV LDLVSK KG+ AE +F
Sbjct: 61 PELERCVEQLRKYRRFQHALEIIEWMEIRKVNFSWSNYAVQLDLVSKTKGVDAAENFFGG 120
Query: 1280 LPPRAKNKYTYGALLNCYCKELMADKALALFDKMNELGYVTSLAFTNLMSLFMRLGQPQK 1101
LPP AKN+YTYGALLNCYCKELM DKAL+ FD M+ELGYVT+LAF N+M+LFM+LG+PQK
Sbjct: 121 LPPPAKNRYTYGALLNCYCKELMKDKALSHFDTMDELGYVTNLAFNNVMTLFMKLGEPQK 180
Query: 1100 VPQLVHDMKQRKIPMTSFTYYVWMNSCASLNDLDGVERIYEEMRREDEDKIDWKTYSNLA 921
VPQLV MK+R IPM+ FTY++WMNSCAS NDL G ER+YEEM+ E+E +I W TYSNLA
Sbjct: 181 VPQLVELMKKRTIPMSPFTYHIWMNSCASSNDLGGAERVYEEMKTENEGQIGWHTYSNLA 240
Query: 920 AIYVKAGQFGKAELLLRKMEQVVKPHDREAYHCLLSLYAGTGNRGEVDRVWKSLKSVSPV 741
+IYVK F KAE++L+ +E+ VKP R+AYHCLL LYAGTGN GEV RVW SLKSVSPV
Sbjct: 241 SIYVKFKDFEKAEMMLKMLEEQVKPKQRDAYHCLLGLYAGTGNLGEVHRVWDSLKSVSPV 300
Query: 740 TNRSYLIMLSTLRKLNDMEGLTKCFKEWESRHVSYDLRLTRVAVSAYLSQNMNEEAASVF 561
TN SYL+MLSTLR+LNDMEGLTKCFKEWE+ VSYD RL V VSA+L+QNM EEA VF
Sbjct: 301 TNFSYLVMLSTLRRLNDMEGLTKCFKEWEASCVSYDARLVSVCVSAHLNQNMLEEAELVF 360
Query: 560 EEAIRRSKGPFFKIREMFMMFFLEKGQLDGAVSHLEDALSEVKDDEWRPSQQVVSAFLKY 381
EEA RRSKGPFF++RE FM FFL+K +LD AV HLE ALSEVK D+WRPS QVV AFLKY
Sbjct: 361 EEASRRSKGPFFRVREEFMKFFLKKHELDAAVRHLEAALSEVKGDKWRPSPQVVGAFLKY 420
Query: 380 YEEETGLDGVEELAKILKAHNFDDSWLKTCIAASESSPETQPILKEDSYLNHAHENL*AD 201
YEEET +DGV+EL+KILKA+NFDDSW+K+CI AS+SSPE P +KEDS + HA E D
Sbjct: 421 YEEETDVDGVDELSKILKANNFDDSWIKSCITASKSSPEIDPGMKEDSQVYHAQETRLLD 480
Query: 200 V 198
+
Sbjct: 481 I 481
Score = 142 bits (358), Expect = 3e-31
Identities = 125/417 (29%), Positives = 197/417 (47%), Gaps = 46/417 (11%)
Frame = -3
Query: 1412 QHALEIMEWMAMRKINFSLDDYAVHLDLVSKRKGLVEAEKYFDDLPPRAKNK---YTYGA 1242
Q +++E M R I S Y + ++ + L AE+ ++++ + + +TY
Sbjct: 179 QKVPQLVELMKKRTIPMSPFTYHIWMNSCASSNDLGGAERVYEEMKTENEGQIGWHTYSN 238
Query: 1241 LLNCYCKELMADKALALFDKMNELGYVTSL-AFTNLMSLFMRLGQPQKVPQLVHDMKQRK 1065
L + Y K +KA + + E A+ L+ L+ G +V ++ +K
Sbjct: 239 LASIYVKFKDFEKAEMMLKMLEEQVKPKQRDAYHCLLGLYAGTGNLGEVHRVWDSLKSVS 298
Query: 1064 IPMTSFTYYVWMNSCASLNDLDGVERIYEEMRREDEDKIDWKTYSNLAAIYVKAGQFGKA 885
P+T+F+Y V +++ LND++G+ + ++E D + S + ++ +A
Sbjct: 299 -PVTNFSYLVMLSTLRRLNDMEGLTKCFKEWEASCVS-YDARLVSVCVSAHLNQNMLEEA 356
Query: 884 ELLLRK----------------MEQVVKPHDREA----YHCLLSLYAGTGNRGEVDRVWK 765
EL+ + M+ +K H+ +A LS G R V
Sbjct: 357 ELVFEEASRRSKGPFFRVREEFMKFFLKKHELDAAVRHLEAALSEVKGDKWRPSPQVVGA 416
Query: 764 SLKSVSPVTNRSYLIMLSTLRKLNDMEG--LTKCF-------------KEWESRHVSYDL 630
LK T+ + LS + K N+ + + C KE + + +
Sbjct: 417 FLKYYEEETDVDGVDELSKILKANNFDDSWIKSCITASKSSPEIDPGMKEDSQVYHAQET 476
Query: 629 RLT-----RVAVSAYLSQNMNEEAASVFEEAIRR-SKGPFFKIREMFMMFFLEKGQLDGA 468
RL ++ V++YL QN EEAA VFEEA RR SK P F I+E M +FLE +LD A
Sbjct: 477 RLLDIMEKQLCVASYLKQNTVEEAALVFEEARRRRSKEPLFSIKEKLMSYFLEIHELDDA 536
Query: 467 VSHLEDALSEVK-DDEWRPSQQVVSAFLKYYEEETGLDGVEELAKILKAHNFDDSWL 300
V HLE A SEVK DDEWRPS Q+V FL+YYEEE +DG +EL KI KA +FD +W+
Sbjct: 537 VRHLEVAFSEVKGDDEWRPSVQIVWDFLEYYEEEMNVDGHDELYKITKAISFDHAWI 593
>gb|ACU24296.1| unknown [Glycine max]
Length = 484
Score = 663 bits (1711), Expect = 0.0
Identities = 326/481 (67%), Positives = 386/481 (80%)
Frame = -3
Query: 1640 MNYXXXXXXXXXXXXXLCTEAERTEKRPNLYRRLSELEMTGRSVSQTLNQYIMEGKALRK 1461
MNY LCT AE K+PNLYR LS L++TG +VSQTL+QYIMEGK ++K
Sbjct: 1 MNYARLISGGGWLLRRLCTAAETPAKKPNLYRMLSALDITGGTVSQTLDQYIMEGKVIKK 60
Query: 1460 GEMESCVKELRKYRRYQHALEIMEWMAMRKINFSLDDYAVHLDLVSKRKGLVEAEKYFDD 1281
E+E CV++LRKYRR+QHALEI+EWM +RK+NFS +YAV LDLVSK KG+ AE +F
Sbjct: 61 PELERCVEQLRKYRRFQHALEIIEWMEIRKVNFSWSNYAVQLDLVSKTKGVDAAENFFGG 120
Query: 1280 LPPRAKNKYTYGALLNCYCKELMADKALALFDKMNELGYVTSLAFTNLMSLFMRLGQPQK 1101
LPP AKN+YTYGALLNCYCKELM DKAL+ FD M+ELGYVT+LAF N+M+LFM+LG+PQK
Sbjct: 121 LPPPAKNRYTYGALLNCYCKELMKDKALSHFDTMDELGYVTNLAFNNVMTLFMKLGEPQK 180
Query: 1100 VPQLVHDMKQRKIPMTSFTYYVWMNSCASLNDLDGVERIYEEMRREDEDKIDWKTYSNLA 921
VPQLV MK+R IPM+ FTY++WMNSCAS NDL G ER+YEEM+ E+E +I W TYSNLA
Sbjct: 181 VPQLVELMKKRTIPMSPFTYHIWMNSCASSNDLGGAERVYEEMKTENEGQIGWHTYSNLA 240
Query: 920 AIYVKAGQFGKAELLLRKMEQVVKPHDREAYHCLLSLYAGTGNRGEVDRVWKSLKSVSPV 741
+IYVK F KAE++L+ +E+ VKP R+AYHCLL LYAGTGN GEV RVW SLKSVSPV
Sbjct: 241 SIYVKFKDFEKAEMMLKMLEEQVKPKQRDAYHCLLGLYAGTGNLGEVHRVWDSLKSVSPV 300
Query: 740 TNRSYLIMLSTLRKLNDMEGLTKCFKEWESRHVSYDLRLTRVAVSAYLSQNMNEEAASVF 561
TN SYL+MLSTLR+LNDMEGLTKCFKEWE+ VSYD RL V VSA+L+QNM EEA VF
Sbjct: 301 TNFSYLVMLSTLRRLNDMEGLTKCFKEWEASCVSYDARLVSVCVSAHLNQNMLEEAELVF 360
Query: 560 EEAIRRSKGPFFKIREMFMMFFLEKGQLDGAVSHLEDALSEVKDDEWRPSQQVVSAFLKY 381
EEA RRSKGPFF++RE FM FFL+K +LD AV HLE ALSEVK D+WRPS QVV AF KY
Sbjct: 361 EEASRRSKGPFFRVREEFMKFFLKKHELDAAVRHLEAALSEVKGDKWRPSPQVVGAFFKY 420
Query: 380 YEEETGLDGVEELAKILKAHNFDDSWLKTCIAASESSPETQPILKEDSYLNHAHENL*AD 201
YEEET +DGV+E +KI KA+NFDDSW+K+CI AS+SSPE P +KEDS + HAHE D
Sbjct: 421 YEEETDVDGVDEFSKIFKANNFDDSWIKSCITASKSSPEIDPGMKEDSQVYHAHETRLLD 480
Query: 200 V 198
+
Sbjct: 481 I 481
>ref|XP_004146883.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02370,
mitochondrial-like [Cucumis sativus]
gi|449518825|ref|XP_004166436.1| PREDICTED:
pentatricopeptide repeat-containing protein At1g02370,
mitochondrial-like [Cucumis sativus]
Length = 474
Score = 515 bits (1326), Expect = e-143
Identities = 258/446 (57%), Positives = 330/446 (73%), Gaps = 8/446 (1%)
Frame = -3
Query: 1553 LYRRLSELEMTGRSVSQTLNQYIMEGKALRKGEMESCVKELRKYRRYQHALEIMEWMAMR 1374
LY RLS L TG SV++T+NQ+IMEG ++K E+E C+KELRKYRRY H L+IMEWM R
Sbjct: 11 LYPRLSALGATGGSVAKTINQFIMEGNIVKKYELEKCIKELRKYRRYHHCLQIMEWMETR 70
Query: 1373 KINFSLDDYAVHLDLVSKRKGLVEAEKYFDDLPPRAKNKYTYGALLNCYCKELMADKALA 1194
KIN+S DYA+ LDL+SK G+ AEKYF DLPP AKN+ TYGALLNCYCKE+M +KAL
Sbjct: 71 KINYSFTDYALRLDLISKVNGVTAAEKYFYDLPPSAKNRCTYGALLNCYCKEMMEEKALT 130
Query: 1193 LFDKMNELGYVTSLAFTNLMSLFMRLGQPQKVPQLVHDMKQRKIPMTSFTYYVWMNSCAS 1014
LF KM+EL TSL+F NLM+++MR+ P+KVP L+ +MKQR +T+FTY VWMNSCAS
Sbjct: 131 LFKKMDELKISTSLSFNNLMTMYMRMDHPEKVPPLIGEMKQRGFYLTTFTYNVWMNSCAS 190
Query: 1013 LNDLDGVERIYEEMRREDEDKIDWKTYSNLAAIYVKAGQFGKAELLLRKMEQVVK--PHD 840
LND+ VE I EEM+ ED +K DW TYSNLA+ YVKAGQF KAEL L+K+E+ +K +D
Sbjct: 191 LNDIGKVEEILEEMKMEDRNKFDWTTYSNLASFYVKAGQFEKAELALKKLEEEMKSDKND 250
Query: 839 REAYHCLLSLYAGTGNRGEVDRVWKSLKSV-SPVTNRSYLIMLSTLRKLNDMEGLTKCFK 663
R YHCL+SLYA T N EV+R+W +LKSV S +TN SYL+ML LRKL D+EGL + +K
Sbjct: 251 RLVYHCLISLYASTSNLSEVNRIWNALKSVYSTMTNISYLVMLQALRKLKDIEGLKRTYK 310
Query: 662 EWESRHVSYDLRLTRVAVSAYLSQNMNEEAASVFEEAIRRSKGPFFKIREMFMMFFLEKG 483
EWES ++DLR+ + AYL Q+M E+AA +FE+A +RSKGPF + REMFM++FL+
Sbjct: 311 EWESNCRNFDLRIVNDIIGAYLQQDMYEDAAMIFEDATKRSKGPFSRAREMFMVYFLKLK 370
Query: 482 QLDGAVSHLEDALSEVKDDEWRPSQQVVSAFLKYYEEETGLDGVEELAKILKAHNFDDS- 306
Q+D A SHLE ALSE K+ EW PS +AFL Y+EEE ++G E+ A+ILK D+
Sbjct: 371 QVDSAFSHLESALSESKEKEWHPSLATTTAFLNYFEEEKDVEGAEDFARILKRLKCLDAS 430
Query: 305 ----WLKTCIAASESSPETQPILKED 240
LKT +AA + +P+ + LKED
Sbjct: 431 GYHLLLKTYVAAGKLAPDMRKRLKED 456
>ref|XP_003632411.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g02370, mitochondrial-like [Vitis vinifera]
Length = 506
Score = 479 bits (1234), Expect = e-133
Identities = 248/454 (54%), Positives = 325/454 (71%), Gaps = 7/454 (1%)
Frame = -3
Query: 1580 AERTEKRPNLYRRLSELEMTGRSVSQTLNQYIMEGKALRKGEMESCVKELRKYRRYQHAL 1401
A R+ ++P LY RLS L TG SV+ TLN++I EGK + K E+ SC+K+LRKYR++QHAL
Sbjct: 37 ASRSVRQPRLYHRLSALGATGGSVADTLNEHIKEGKLIAKHELSSCIKQLRKYRQFQHAL 96
Query: 1400 EIMEWMAMRKINFSLDDYAVHLDLVSKRKGLVEAEKYFDDLPPRAKNKYTYGALLNCYCK 1221
EIM+WM RKI FS DYAV LDL+SK KGL AE+YF++L P AKN TYG LLNCYCK
Sbjct: 97 EIMDWMENRKIFFSYADYAVRLDLLSKTKGLATAEEYFNNLSPSAKNLLTYGTLLNCYCK 156
Query: 1220 ELMADKALALFDKMNELGYV-TSLAFTNLMSLFMRLGQPQKVPQLVHDMKQRKIPMTSFT 1044
E M +KALALF+KM+EL + TSL F NLMSL MRLG+P+ VP LV +MK+R I +FT
Sbjct: 157 EKMEEKALALFEKMDELNFASTSLTFNNLMSLHMRLGKPEMVPPLVDEMKKRSISPDTFT 216
Query: 1043 YYVWMNSCASLNDLDGVERIYEEMRREDEDKIDWKTYSNLAAIYVKAGQFGKAELLLRKM 864
Y + M S A LND++G ER+ EE++RE+EDK+ W TYSNLAA+YV A F KAEL L+K+
Sbjct: 217 YNILMQSYARLNDIEGAERVLEEIKRENEDKLSWTTYSNLAAVYVNARLFEKAELALKKL 276
Query: 863 EQVVKPHDREAYHCLLSLYAGTGNRGEVDRVWKSLKSVSPVTNR-SYLIMLSTLRKLNDM 687
E+ + HDR AYH L+SLYAG N EV+RVW SLKS P TN SY IML L LND+
Sbjct: 277 EEEMGFHDRLAYHFLISLYAGINNLSEVNRVWNSLKSAFPKTNNMSYFIMLQALANLNDV 336
Query: 686 EGLTKCFKEWESRHVSYDLRLTRVAVSAYLSQNMNEEAASVFEEAIRRSKGPFFKIREMF 507
+GL CF+EW+S S+D+RL VAV A+L +M ++A S+ EA++RS GPF+ +MF
Sbjct: 337 DGLKICFEEWKSSCFSFDVRLANVAVRAFLGWDMIKDAESILYEAVKRSSGPFYTALDMF 396
Query: 506 MMFFLEKGQLDGAVSHLEDALSEVKDDEWRPSQQVVSAFLKYYEEETGLDGVEELAKILK 327
M L+ ++D A+ ++E A SEVK++EW+P+ + V AFLKY+EEE ++G E+ KILK
Sbjct: 397 MAHHLKVREIDTALKYMEAAASEVKNNEWQPAPERVLAFLKYFEEEKDVEGAEKFCKILK 456
Query: 326 AHNFDDS-----WLKTCIAASESSPETQPILKED 240
+ DS L+T +AA + PE + +KED
Sbjct: 457 NISGLDSNAYQLLLQTXVAAGRTEPEMRKRMKED 490