BLASTX nr result

ID: Glycyrrhiza23_contig00016219 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00016219
         (399 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003533804.1| PREDICTED: putative uncharacterized protein ...   180   1e-43
ref|XP_002516202.1| zinc finger protein, putative [Ricinus commu...   179   2e-43
ref|XP_003547526.1| PREDICTED: uncharacterized protein LOC100803...   174   7e-42
ref|XP_002324718.1| predicted protein [Populus trichocarpa] gi|2...   171   4e-41
ref|XP_002277363.1| PREDICTED: probable E3 ubiquitin-protein lig...   164   5e-39

>ref|XP_003533804.1| PREDICTED: putative uncharacterized protein At4g01020,
           chloroplastic-like [Glycine max]
          Length = 333

 Score =  180 bits (456), Expect = 1e-43
 Identities = 85/133 (63%), Positives = 97/133 (72%), Gaps = 1/133 (0%)
 Frame = +3

Query: 3   RFEKGESSSSPSNGTPFVCEICTETKTARDAFTISGCSHAYCSDCVAMYVASKVEENVIN 182
           R +K  S    SN   FVCEICTETKTARD+F+I GC H YC+ CVA YV SK+EEN+++
Sbjct: 110 RSKKSSSKGECSNSASFVCEICTETKTARDSFSIIGCHHVYCNSCVAQYVESKLEENIVS 169

Query: 183 IRCPASGCTAGLLEAEDCRSILPAAVFDRWGKASCEAAIAASEKFYCPFGDCSALLIDDG 362
           I CP  GC  GLLEA+DCR IL   VFDRWGKA CEA IAA EKFYCPF DCS +LI   
Sbjct: 170 IPCPVPGC-RGLLEADDCREILAPRVFDRWGKALCEAVIAAEEKFYCPFADCSVMLIRGI 228

Query: 363 TE-AVRESECPNC 398
            E  +RE+ECPNC
Sbjct: 229 EENNIREAECPNC 241


>ref|XP_002516202.1| zinc finger protein, putative [Ricinus communis]
           gi|223544688|gb|EEF46204.1| zinc finger protein,
           putative [Ricinus communis]
          Length = 400

 Score =  179 bits (454), Expect = 2e-43
 Identities = 83/130 (63%), Positives = 99/130 (76%)
 Frame = +3

Query: 9   EKGESSSSPSNGTPFVCEICTETKTARDAFTISGCSHAYCSDCVAMYVASKVEENVINIR 188
           EKG SS  P++   FVCEIC E+KTA ++  I GC+HAYC+DC+A YVASK++EN+  I 
Sbjct: 192 EKGHSSE-PNDHPQFVCEICVESKTADESLAIRGCTHAYCTDCMAKYVASKIQENITGIY 250

Query: 189 CPASGCTAGLLEAEDCRSILPAAVFDRWGKASCEAAIAASEKFYCPFGDCSALLIDDGTE 368
           CP SGC  GLLE E CRSILP  VFDRWG A CEA    S+KFYCPF DCSA+LI+DG E
Sbjct: 251 CPVSGC-GGLLEPEYCRSILPQEVFDRWGNALCEALNLGSQKFYCPFKDCSAMLINDGGE 309

Query: 369 AVRESECPNC 398
            +RESECP+C
Sbjct: 310 VIRESECPHC 319


>ref|XP_003547526.1| PREDICTED: uncharacterized protein LOC100803898 [Glycine max]
          Length = 685

 Score =  174 bits (441), Expect = 7e-42
 Identities = 82/133 (61%), Positives = 96/133 (72%), Gaps = 1/133 (0%)
 Frame = +3

Query: 3   RFEKGESSSSPSNGTPFVCEICTETKTARDAFTISGCSHAYCSDCVAMYVASKVEENVIN 182
           R +K  S    S+  PF+CEICTETKT RD+F+I+GC H YC+ CVA YV SK+E+NV+N
Sbjct: 110 RRKKSSSKGECSSTAPFLCEICTETKTDRDSFSITGCRHVYCNSCVAQYVESKLEDNVVN 169

Query: 183 IRCPASGCTAGLLEAEDCRSILPAAVFDRWGKASCEAAIAASEKFYCPFGDCSALLIDDG 362
           I CP  GC  GLLEA+ CR IL   VFDRWG A CEA I A EKFYCPF DCSA+LI   
Sbjct: 170 IPCPVPGC-RGLLEADYCREILSPRVFDRWGNALCEAVIDAEEKFYCPFADCSAMLIRAS 228

Query: 363 TEA-VRESECPNC 398
            +A +RE ECPNC
Sbjct: 229 EDADIRECECPNC 241


>ref|XP_002324718.1| predicted protein [Populus trichocarpa] gi|222866152|gb|EEF03283.1|
           predicted protein [Populus trichocarpa]
          Length = 307

 Score =  171 bits (434), Expect = 4e-41
 Identities = 78/130 (60%), Positives = 96/130 (73%)
 Frame = +3

Query: 9   EKGESSSSPSNGTPFVCEICTETKTARDAFTISGCSHAYCSDCVAMYVASKVEENVINIR 188
           EKG+SS+S  +   FVC+IC E    +++F I GC+HAYC++C+  YV+SK++EN+  I 
Sbjct: 85  EKGQSSNSQID-PDFVCQICVEPTILKNSFLIKGCTHAYCTECMVKYVSSKLQENITKIC 143

Query: 189 CPASGCTAGLLEAEDCRSILPAAVFDRWGKASCEAAIAASEKFYCPFGDCSALLIDDGTE 368
           CP   C  G LE EDCRS+LP  VFDRWG A CEA I  S+KFYCPF DCSA+LIDDG E
Sbjct: 144 CPVPDCK-GALEPEDCRSVLPENVFDRWGNALCEAVILGSQKFYCPFKDCSAMLIDDGEE 202

Query: 369 AVRESECPNC 398
            VRESECPNC
Sbjct: 203 VVRESECPNC 212


>ref|XP_002277363.1| PREDICTED: probable E3 ubiquitin-protein ligase RNF144A-B-like
           [Vitis vinifera]
          Length = 358

 Score =  164 bits (416), Expect = 5e-39
 Identities = 76/131 (58%), Positives = 94/131 (71%), Gaps = 1/131 (0%)
 Frame = +3

Query: 9   EKGESSSSPSNGTP-FVCEICTETKTARDAFTISGCSHAYCSDCVAMYVASKVEENVINI 185
           E G+ S+S  +  P FVCEIC + K    +F+I GC H+YCSDC+  YVASK+++NV  I
Sbjct: 108 ETGQPSNSKPDPPPTFVCEICIDPKPLNHSFSIKGCPHSYCSDCMTKYVASKLQDNVSRI 167

Query: 186 RCPASGCTAGLLEAEDCRSILPAAVFDRWGKASCEAAIAASEKFYCPFGDCSALLIDDGT 365
            CPA  CT G+LE + CR ILP+ VFDRWG A CEA I  S+KFYCP+ DCSALLI D  
Sbjct: 168 SCPAPNCT-GVLEPQQCRPILPSHVFDRWGNALCEALILGSQKFYCPYKDCSALLIRDEG 226

Query: 366 EAVRESECPNC 398
           E ++ESECPNC
Sbjct: 227 EVIKESECPNC 237


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