BLASTX nr result

ID: Glycyrrhiza23_contig00016191 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00016191
         (1089 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003609294.1| DEAD-box ATP-dependent RNA helicase [Medicag...   382   e-104
ref|XP_003550826.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   371   e-100
ref|XP_003541505.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   366   5e-99
ref|XP_002283489.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   345   1e-92
ref|XP_002281113.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   344   2e-92

>ref|XP_003609294.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
            gi|355510349|gb|AES91491.1| DEAD-box ATP-dependent RNA
            helicase [Medicago truncatula]
          Length = 671

 Score =  382 bits (981), Expect = e-104
 Identities = 220/345 (63%), Positives = 238/345 (68%), Gaps = 17/345 (4%)
 Frame = -3

Query: 985  AWSDASIHFTHNKPTRPSGPRYLPHFRSN----GVVP-PYYNQPSSPFPDY-STHYG-FN 827
            AWSD+    T  K  RPS   Y+P FRSN     + P PYYN   + FP   S HY  FN
Sbjct: 4    AWSDS----TTQKQNRPSQQLYVPQFRSNPNNNNIHPSPYYNNNRTHFPSNDSPHYNTFN 59

Query: 826  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXR------SPFXXXXXXXXXXVDANF 665
                                                      SPF          V ANF
Sbjct: 60   RPTPRPTRGRGGYGFGHSPAPPRHYSRPEQQQPRYYDPSQNRSPFETNGEKVENGVVANF 119

Query: 664  DAYESVPVEASGENIPPPVNAFAETDLDEDLKKNILRCKYVKPTPVQRHAIPIAVAGRDL 485
            +AYES+PVEA+GEN+PPPVN FAET+L EDLK NI RCKYVKPTPVQR+AIPIAVAGRDL
Sbjct: 120  EAYESIPVEATGENVPPPVNLFAETELHEDLKNNIERCKYVKPTPVQRYAIPIAVAGRDL 179

Query: 484  MACAQTGSGKTAAFCFPIISGILKGRSAPGFSFSSMPRG----STVAYPTALILSPTREL 317
            MACAQTGSGKTAAFCFPIISGI+K R A G     +PRG    S VA+PTALILSPTREL
Sbjct: 180  MACAQTGSGKTAAFCFPIISGIMKERLASGL----LPRGGGVDSDVAFPTALILSPTREL 235

Query: 316  SCQIHAEATKFAYQTGVKIAVAYGGASIAQQLRNLEKGVDILVATPGRLVDMIERERVSL 137
            SCQIHAEA KFA+QTGVKIAV YGGA I QQLR LE+GVDILVATPGRLVD+IERERVSL
Sbjct: 236  SCQIHAEACKFAHQTGVKIAVVYGGAPIGQQLRILERGVDILVATPGRLVDLIERERVSL 295

Query: 136  TKIKFLALDEADRMLDMGFEHQIRKIVEQMHMPPPGTRQTLLFSA 2
             KIK+LALDEADRMLDMGFEHQIR IV+QMHMPPPG RQTLLFSA
Sbjct: 296  KKIKYLALDEADRMLDMGFEHQIRNIVQQMHMPPPGDRQTLLFSA 340


>ref|XP_003550826.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 52B-like [Glycine
           max]
          Length = 610

 Score =  371 bits (952), Expect = e-100
 Identities = 191/224 (85%), Positives = 202/224 (90%), Gaps = 1/224 (0%)
 Frame = -3

Query: 670 NFDAYESVPVEASGENIPPPVNAFAETDLDEDLKKNILRCKYVKPTPVQRHAIPIAVAGR 491
           NFDAYESVPVEASG+++PPPVN F E DLDE LK+NI RCKYVKPTPVQRHAIPIA AGR
Sbjct: 70  NFDAYESVPVEASGKDVPPPVNTFNEADLDEGLKRNIDRCKYVKPTPVQRHAIPIASAGR 129

Query: 490 DLMACAQTGSGKTAAFCFPIISGILKGRSAPGFSFSSMP-RGSTVAYPTALILSPTRELS 314
           DLMACAQTGSGKTAAFCFPIISGILKGRS  GFS  SMP RG+ VAYPTALILSPTRELS
Sbjct: 130 DLMACAQTGSGKTAAFCFPIISGILKGRSLSGFS--SMPARGAAVAYPTALILSPTRELS 187

Query: 313 CQIHAEATKFAYQTGVKIAVAYGGASIAQQLRNLEKGVDILVATPGRLVDMIERERVSLT 134
           CQI  EA K+A+QTGVK+ VAYGGA I QQLR +EKGVDILVATPGRLVD+IERERVSLT
Sbjct: 188 CQIRDEANKYAHQTGVKVVVAYGGAPITQQLRLMEKGVDILVATPGRLVDIIERERVSLT 247

Query: 133 KIKFLALDEADRMLDMGFEHQIRKIVEQMHMPPPGTRQTLLFSA 2
           KIK+LALDEADRMLDMGFEHQIRKIVEQM MP PG RQTLLFSA
Sbjct: 248 KIKYLALDEADRMLDMGFEHQIRKIVEQMQMPSPGIRQTLLFSA 291


>ref|XP_003541505.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 52B-like [Glycine
           max]
          Length = 586

 Score =  366 bits (940), Expect = 5e-99
 Identities = 186/223 (83%), Positives = 197/223 (88%)
 Frame = -3

Query: 670 NFDAYESVPVEASGENIPPPVNAFAETDLDEDLKKNILRCKYVKPTPVQRHAIPIAVAGR 491
           NF+AYESVPVEASG+++P PVN F E DLDE LK+NI RCKYVKPTPVQRHAIPI  AGR
Sbjct: 51  NFEAYESVPVEASGKDVPAPVNTFNEADLDEGLKRNIERCKYVKPTPVQRHAIPIVSAGR 110

Query: 490 DLMACAQTGSGKTAAFCFPIISGILKGRSAPGFSFSSMPRGSTVAYPTALILSPTRELSC 311
           DLMACAQTGSGKTAAFCFPIISGILKGR   GFS    P G+ +AYP ALILSPTRELSC
Sbjct: 111 DLMACAQTGSGKTAAFCFPIISGILKGRYRSGFSSIPSP-GAAIAYPAALILSPTRELSC 169

Query: 310 QIHAEATKFAYQTGVKIAVAYGGASIAQQLRNLEKGVDILVATPGRLVDMIERERVSLTK 131
           QI  EA KFAYQTGVK+ VAYGGA I QQLR L+KGVDILVATPGRLVD+IERERVSLTK
Sbjct: 170 QIRDEANKFAYQTGVKVVVAYGGAPITQQLRLLKKGVDILVATPGRLVDIIERERVSLTK 229

Query: 130 IKFLALDEADRMLDMGFEHQIRKIVEQMHMPPPGTRQTLLFSA 2
           IK+LALDEADRMLDMGFEHQIRKIVEQMHMPPPG RQTLLFSA
Sbjct: 230 IKYLALDEADRMLDMGFEHQIRKIVEQMHMPPPGIRQTLLFSA 272


>ref|XP_002283489.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 37 [Vitis vinifera]
           gi|147854540|emb|CAN78578.1| hypothetical protein
           VITISV_013679 [Vitis vinifera]
          Length = 612

 Score =  345 bits (884), Expect = 1e-92
 Identities = 171/223 (76%), Positives = 192/223 (86%)
 Frame = -3

Query: 670 NFDAYESVPVEASGENIPPPVNAFAETDLDEDLKKNILRCKYVKPTPVQRHAIPIAVAGR 491
           NFDAYE +PVE SG+N+PPPVN FAE DL E L +NI RCKYVKPTPVQRHAIPI++AGR
Sbjct: 132 NFDAYEDIPVETSGDNVPPPVNTFAEIDLGEALNQNIKRCKYVKPTPVQRHAIPISLAGR 191

Query: 490 DLMACAQTGSGKTAAFCFPIISGILKGRSAPGFSFSSMPRGSTVAYPTALILSPTRELSC 311
           DLMACAQTGSGKTAAFCFPIISGI+KG+++        PRG+   YP ALILSPTRELSC
Sbjct: 192 DLMACAQTGSGKTAAFCFPIISGIMKGQAS-----QRPPRGARTVYPLALILSPTRELSC 246

Query: 310 QIHAEATKFAYQTGVKIAVAYGGASIAQQLRNLEKGVDILVATPGRLVDMIERERVSLTK 131
           QIH EA KF+YQTGVK+ VAYGGA I+QQLR+LE+GVDILVATPGRLVD++ER RVSL  
Sbjct: 247 QIHDEAKKFSYQTGVKVVVAYGGAPISQQLRDLERGVDILVATPGRLVDLLERARVSLQM 306

Query: 130 IKFLALDEADRMLDMGFEHQIRKIVEQMHMPPPGTRQTLLFSA 2
           I++LALDEADRMLDMGFE QIRKIVEQM MPP G RQT+LFSA
Sbjct: 307 IRYLALDEADRMLDMGFEPQIRKIVEQMDMPPQGVRQTMLFSA 349


>ref|XP_002281113.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 37-like [Vitis
           vinifera]
          Length = 622

 Score =  344 bits (882), Expect = 2e-92
 Identities = 170/223 (76%), Positives = 190/223 (85%)
 Frame = -3

Query: 670 NFDAYESVPVEASGENIPPPVNAFAETDLDEDLKKNILRCKYVKPTPVQRHAIPIAVAGR 491
           NFDAYE +PVE SG+N+PPPVN FAE DL E L +NI RCKYVKPTPVQRHAIPI+++G+
Sbjct: 142 NFDAYEDIPVETSGDNVPPPVNTFAEIDLGEALNQNIRRCKYVKPTPVQRHAIPISLSGK 201

Query: 490 DLMACAQTGSGKTAAFCFPIISGILKGRSAPGFSFSSMPRGSTVAYPTALILSPTRELSC 311
           DLMACAQTGSGKTAAFCFPIISGI+ G+      F+  PRG+   YP ALILSPTRELSC
Sbjct: 202 DLMACAQTGSGKTAAFCFPIISGIMTGQ------FAQRPRGARTVYPLALILSPTRELSC 255

Query: 310 QIHAEATKFAYQTGVKIAVAYGGASIAQQLRNLEKGVDILVATPGRLVDMIERERVSLTK 131
           QIH EA KF+YQTGVK+ VAYGGA I QQLR LE+GVDILVATPGRLVD++ER RVSL  
Sbjct: 256 QIHDEARKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQM 315

Query: 130 IKFLALDEADRMLDMGFEHQIRKIVEQMHMPPPGTRQTLLFSA 2
           I++LALDEADRMLDMGFE QIRKIVEQM MPPPG RQT+LFSA
Sbjct: 316 IRYLALDEADRMLDMGFEPQIRKIVEQMDMPPPGVRQTMLFSA 358


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