BLASTX nr result

ID: Glycyrrhiza23_contig00016179 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00016179
         (1135 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003626358.1| Trafficking protein particle complex subunit...   325   e-100
ref|NP_001235695.1| uncharacterized protein LOC100500020 [Glycin...   345   1e-92
ref|XP_003521728.1| PREDICTED: trafficking protein particle comp...   345   2e-92
gb|ACU19411.1| unknown [Glycine max]                                  342   8e-92
ref|XP_003626359.1| Trafficking protein particle complex subunit...   338   1e-90

>ref|XP_003626358.1| Trafficking protein particle complex subunit 6B [Medicago
           truncatula] gi|355501373|gb|AES82576.1| Trafficking
           protein particle complex subunit 6B [Medicago
           truncatula]
          Length = 260

 Score =  325 bits (832), Expect(2) = e-100
 Identities = 156/174 (89%), Positives = 166/174 (95%)
 Frame = +2

Query: 131 MVKEVSESCVDNLLTEMVACYCNRFYANKPELAARRIEAIGYQVGHQLSERYTMERPRFS 310
           MV+EVSESCVD+L+TEMVACYCNRFYANKPELAARRIEAIGYQVG QLSERYTMERPRF 
Sbjct: 1   MVREVSESCVDSLMTEMVACYCNRFYANKPELAARRIEAIGYQVGQQLSERYTMERPRFG 60

Query: 311 DHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNKFRWLARMSVDPSADNVTSVED 490
           DHLEAIKFICKDFWSE+FKKQIDNLKTNHRGTFVLQDNKF WLARMSVDPS DNV+SVED
Sbjct: 61  DHLEAIKFICKDFWSEVFKKQIDNLKTNHRGTFVLQDNKFPWLARMSVDPSTDNVSSVED 120

Query: 491 ISSPTAESKAAQAMSMHLYFPCGIIRGALSNLGIPCAVSADISNLPACSFVVRI 652
            S+PTAESKAAQAMSMHLYFPCGIIRGALSNLGIPCAVSADIS+LPAC  ++ +
Sbjct: 121 YSAPTAESKAAQAMSMHLYFPCGIIRGALSNLGIPCAVSADISSLPACVHLLSV 174



 Score = 68.6 bits (166), Expect(2) = e-100
 Identities = 47/110 (42%), Positives = 53/110 (48%)
 Frame = +3

Query: 633 VHLLSV*KLDKFICITDGRGSINIVQNNARFDVCELFCLKFAGPGNVSLPYLNYQILLTW 812
           VHLLSV KLDKFICITD RG INIV N+       LFC KFAG GN  +    +  L   
Sbjct: 169 VHLLSVLKLDKFICITDVRGIINIVLNDHLMSGTVLFCPKFAGVGNKEVQMKCFDKLGLG 228

Query: 813 LYRKGSCEVF**ARTWFLRMQILWRLRLFGVSVTNYVWYRVERHWEFQSL 962
            +    C        W               SV + +W  VER WEFQSL
Sbjct: 229 SF---GCRFHGDYDNW---------------SVAHILWCTVERQWEFQSL 260


>ref|NP_001235695.1| uncharacterized protein LOC100500020 [Glycine max]
           gi|255628547|gb|ACU14618.1| unknown [Glycine max]
          Length = 180

 Score =  345 bits (885), Expect = 1e-92
 Identities = 166/176 (94%), Positives = 173/176 (98%)
 Frame = +2

Query: 131 MVKEVSESCVDNLLTEMVACYCNRFYANKPELAARRIEAIGYQVGHQLSERYTMERPRFS 310
           MV+EVSESCVD+LLTEMVACYCNRFY NKPELAARRIEAIGYQVGHQLSERYTMERPRF+
Sbjct: 1   MVREVSESCVDSLLTEMVACYCNRFYTNKPELAARRIEAIGYQVGHQLSERYTMERPRFT 60

Query: 311 DHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNKFRWLARMSVDPSADNVTSVED 490
           DHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNKFRWLARMS+DPS DNV+ +ED
Sbjct: 61  DHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNKFRWLARMSIDPSTDNVSPLED 120

Query: 491 ISSPTAESKAAQAMSMHLYFPCGIIRGALSNLGIPCAVSADISNLPACSFVVRIKA 658
           I+SPTAESKAAQAMSMHLYFPCGIIRGALSNLGIPCAVSADISNLPACSFVVRIKA
Sbjct: 121 ITSPTAESKAAQAMSMHLYFPCGIIRGALSNLGIPCAVSADISNLPACSFVVRIKA 176


>ref|XP_003521728.1| PREDICTED: trafficking protein particle complex subunit 6B-like
           [Glycine max]
          Length = 176

 Score =  345 bits (884), Expect = 2e-92
 Identities = 165/176 (93%), Positives = 174/176 (98%)
 Frame = +2

Query: 131 MVKEVSESCVDNLLTEMVACYCNRFYANKPELAARRIEAIGYQVGHQLSERYTMERPRFS 310
           MV+EVSESC+D+LLTEMVACYCNRFYANKPELAARRIEAIGYQVGHQLSERYTM+RPRF+
Sbjct: 1   MVREVSESCIDSLLTEMVACYCNRFYANKPELAARRIEAIGYQVGHQLSERYTMDRPRFT 60

Query: 311 DHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNKFRWLARMSVDPSADNVTSVED 490
           DHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNKFRWLARMS+DPS +NV+ VED
Sbjct: 61  DHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNKFRWLARMSIDPSTENVSPVED 120

Query: 491 ISSPTAESKAAQAMSMHLYFPCGIIRGALSNLGIPCAVSADISNLPACSFVVRIKA 658
           I+SPTAESKAAQAMSMHLYFPCGIIRGALSNLGIPCAVSADISNLPACSFVVRIKA
Sbjct: 121 ITSPTAESKAAQAMSMHLYFPCGIIRGALSNLGIPCAVSADISNLPACSFVVRIKA 176


>gb|ACU19411.1| unknown [Glycine max]
          Length = 176

 Score =  342 bits (878), Expect = 8e-92
 Identities = 164/176 (93%), Positives = 174/176 (98%)
 Frame = +2

Query: 131 MVKEVSESCVDNLLTEMVACYCNRFYANKPELAARRIEAIGYQVGHQLSERYTMERPRFS 310
           MV+EVSESC+D+LLTEMVACYCNRFYANKPELAARRIEAIGYQVGHQLSERYTM+RPRF+
Sbjct: 1   MVREVSESCIDSLLTEMVACYCNRFYANKPELAARRIEAIGYQVGHQLSERYTMDRPRFT 60

Query: 311 DHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNKFRWLARMSVDPSADNVTSVED 490
           DHLEAIKFICKDFWSELFKKQIDNLKTN+RGTFVLQDNKFRWLARMS+DPS +NV+ VED
Sbjct: 61  DHLEAIKFICKDFWSELFKKQIDNLKTNYRGTFVLQDNKFRWLARMSIDPSTENVSPVED 120

Query: 491 ISSPTAESKAAQAMSMHLYFPCGIIRGALSNLGIPCAVSADISNLPACSFVVRIKA 658
           I+SPTAESKAAQAMSMHLYFPCGIIRGALSNLGIPCAVSADISNLPACSFVVRIKA
Sbjct: 121 ITSPTAESKAAQAMSMHLYFPCGIIRGALSNLGIPCAVSADISNLPACSFVVRIKA 176


>ref|XP_003626359.1| Trafficking protein particle complex subunit 6B [Medicago
           truncatula] gi|124360137|gb|ABN08153.1| Transport
           protein particle (TRAPP) component, Bet3 [Medicago
           truncatula] gi|217075406|gb|ACJ86063.1| unknown
           [Medicago truncatula] gi|355501374|gb|AES82577.1|
           Trafficking protein particle complex subunit 6B
           [Medicago truncatula] gi|388505832|gb|AFK40982.1|
           unknown [Medicago truncatula]
          Length = 176

 Score =  338 bits (867), Expect = 1e-90
 Identities = 164/176 (93%), Positives = 171/176 (97%)
 Frame = +2

Query: 131 MVKEVSESCVDNLLTEMVACYCNRFYANKPELAARRIEAIGYQVGHQLSERYTMERPRFS 310
           MV+EVSESCVD+L+TEMVACYCNRFYANKPELAARRIEAIGYQVG QLSERYTMERPRF 
Sbjct: 1   MVREVSESCVDSLMTEMVACYCNRFYANKPELAARRIEAIGYQVGQQLSERYTMERPRFG 60

Query: 311 DHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNKFRWLARMSVDPSADNVTSVED 490
           DHLEAIKFICKDFWSE+FKKQIDNLKTNHRGTFVLQDNKF WLARMSVDPS DNV+SVED
Sbjct: 61  DHLEAIKFICKDFWSEVFKKQIDNLKTNHRGTFVLQDNKFPWLARMSVDPSTDNVSSVED 120

Query: 491 ISSPTAESKAAQAMSMHLYFPCGIIRGALSNLGIPCAVSADISNLPACSFVVRIKA 658
            S+PTAESKAAQAMSMHLYFPCGIIRGALSNLGIPCAVSADIS+LPACSFVVRIKA
Sbjct: 121 YSAPTAESKAAQAMSMHLYFPCGIIRGALSNLGIPCAVSADISSLPACSFVVRIKA 176


Top