BLASTX nr result

ID: Glycyrrhiza23_contig00016162 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00016162
         (317 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADN33882.1| 3'-5' exonuclease [Cucumis melo subsp. melo]           107   1e-21
ref|XP_004136636.1| PREDICTED: Werner Syndrome-like exonuclease-...   106   2e-21
ref|XP_003530245.1| PREDICTED: Werner Syndrome-like exonuclease-...   106   2e-21
ref|XP_004136771.1| PREDICTED: Werner Syndrome-like exonuclease-...   104   7e-21
ref|XP_002308852.1| predicted protein [Populus trichocarpa] gi|2...    98   6e-19

>gb|ADN33882.1| 3'-5' exonuclease [Cucumis melo subsp. melo]
          Length = 209

 Score =  107 bits (266), Expect = 1e-21
 Identities = 51/85 (60%), Positives = 68/85 (80%), Gaps = 1/85 (1%)
 Frame = -2

Query: 253 ISVVDHELPFDTHNRYDVAFDS-ETIDTLLTSSPTHLDTWLTETLQLHNPHPFVVGLDIE 77
           I++VDHE+P D+HN +D+ FD+ E I TLLT+SP+ +D W+++TL +  P P +VGLDIE
Sbjct: 3   ITIVDHEVPSDSHNYFDITFDNDEPILTLLTTSPSMVDDWISQTLTIQTP-PLLVGLDIE 61

Query: 76  WRPNFQRNSDNPVATLQLCINRRCI 2
           WRPN  R+ DNPVATLQLCI RRC+
Sbjct: 62  WRPN-NRSYDNPVATLQLCIGRRCL 85


>ref|XP_004136636.1| PREDICTED: Werner Syndrome-like exonuclease-like [Cucumis sativus]
           gi|449506001|ref|XP_004162625.1| PREDICTED: Werner
           Syndrome-like exonuclease-like [Cucumis sativus]
          Length = 209

 Score =  106 bits (265), Expect = 2e-21
 Identities = 51/85 (60%), Positives = 68/85 (80%), Gaps = 1/85 (1%)
 Frame = -2

Query: 253 ISVVDHELPFDTHNRYDVAFDS-ETIDTLLTSSPTHLDTWLTETLQLHNPHPFVVGLDIE 77
           I++VDHE+P D+HN +D+ FD+ E I TLLT+SP+ +D W+++TL +  P P +VGLDIE
Sbjct: 3   ITIVDHEVPSDSHNYFDITFDTDEPILTLLTTSPSMVDGWISQTLAIQTP-PLLVGLDIE 61

Query: 76  WRPNFQRNSDNPVATLQLCINRRCI 2
           WRPN  R+ DNPVATLQLCI RRC+
Sbjct: 62  WRPN-NRSYDNPVATLQLCIGRRCL 85


>ref|XP_003530245.1| PREDICTED: Werner Syndrome-like exonuclease-like [Glycine max]
          Length = 238

 Score =  106 bits (264), Expect = 2e-21
 Identities = 53/91 (58%), Positives = 65/91 (71%), Gaps = 5/91 (5%)
 Frame = -2

Query: 259 AVISVVDHELPFDTHNRYDVAFDS-ETIDTLLTSSPTHLDTWLTETLQ----LHNPHPFV 95
           A ISVVDH LP+DTHN YDV+F++  TI TLLTS P+ +D+W++  L+     H      
Sbjct: 25  APISVVDHGLPYDTHNLYDVSFNNTHTIYTLLTSDPSLVDSWISTVLRDHQHQHQQRVLT 84

Query: 94  VGLDIEWRPNFQRNSDNPVATLQLCINRRCI 2
           VGLDIEWRPN QRN  NPVATLQLC+  RC+
Sbjct: 85  VGLDIEWRPNTQRNMQNPVATLQLCVAERCL 115


>ref|XP_004136771.1| PREDICTED: Werner Syndrome-like exonuclease-like [Cucumis sativus]
           gi|449506025|ref|XP_004162631.1| PREDICTED: Werner
           Syndrome-like exonuclease-like [Cucumis sativus]
          Length = 210

 Score =  104 bits (260), Expect = 7e-21
 Identities = 44/88 (50%), Positives = 66/88 (75%), Gaps = 2/88 (2%)
 Frame = -2

Query: 259 AVISVVDHELPFDTHNRYDVAFDSETIDTLLTSSPTHLDTWLTETLQLHNP--HPFVVGL 86
           A +++ D ++P ++H+ YD+ FD + I TL+T+SP+ +D W++E L++H    H  VVGL
Sbjct: 2   ATLTISDRQIPLNSHDYYDITFDDDEILTLVTASPSMVDMWISEILRIHRRRLHRLVVGL 61

Query: 85  DIEWRPNFQRNSDNPVATLQLCINRRCI 2
           D+EWRPNF R+  NPVATLQLC+ RRC+
Sbjct: 62  DVEWRPNFDRHFRNPVATLQLCVGRRCL 89


>ref|XP_002308852.1| predicted protein [Populus trichocarpa] gi|222854828|gb|EEE92375.1|
           predicted protein [Populus trichocarpa]
          Length = 215

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 49/90 (54%), Positives = 64/90 (71%), Gaps = 6/90 (6%)
 Frame = -2

Query: 253 ISVVDHELPFDTHNRYDVAFDSETIDTLLTSSPTHLDTWLTETLQ-LH---NP--HPFVV 92
           IS+ DH+LP++THN YDV F  + I TL+T +P+ ++TW+ ET Q LH   NP  HP +V
Sbjct: 3   ISIEDHQLPYNTHNLYDVNFFDDKIHTLVTHTPSFVNTWIAETQQKLHQNNNPADHPLLV 62

Query: 91  GLDIEWRPNFQRNSDNPVATLQLCINRRCI 2
           GLDIEWRPN  R  +NPVATLQL   + C+
Sbjct: 63  GLDIEWRPNRTRQIENPVATLQLSTGKDCL 92


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