BLASTX nr result
ID: Glycyrrhiza23_contig00016154
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza23_contig00016154
(1528 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003541362.1| PREDICTED: DNA repair and recombination prot... 823 0.0
ref|XP_002307656.1| chromatin remodeling complex subunit [Populu... 714 0.0
ref|XP_002529848.1| DNA repair and recombination protein RAD26, ... 714 0.0
emb|CAN67815.1| hypothetical protein VITISV_002502 [Vitis vinifera] 710 0.0
ref|XP_002272543.1| PREDICTED: DNA excision repair protein ERCC-... 708 0.0
>ref|XP_003541362.1| PREDICTED: DNA repair and recombination protein RAD26-like [Glycine
max]
Length = 1210
Score = 823 bits (2127), Expect = 0.0
Identities = 401/446 (89%), Positives = 423/446 (94%)
Frame = -1
Query: 1528 RPLPGRKWTKHVSFEDIQLEESENANGCLDTSSCENLEAQDVELSEHESSYVTLEGGLKI 1349
RPLPGRKWTK VS ED EESEN NGCLD+SSCENLE QDVEL + ESSYVTLEGGLKI
Sbjct: 325 RPLPGRKWTKRVSCEDSHPEESENTNGCLDSSSCENLEEQDVELDDQESSYVTLEGGLKI 384
Query: 1348 PENIFEALFDYQKVGVQWLWELHCQRAGGIIGDEMGLGKTVQVLSFLGALHFSGIYRPSI 1169
P+NIFEALFDYQKVGVQWLWELHCQRAGGIIGDEMGLGKTVQVLSFLGALHFSG+Y+PSI
Sbjct: 385 PDNIFEALFDYQKVGVQWLWELHCQRAGGIIGDEMGLGKTVQVLSFLGALHFSGMYKPSI 444
Query: 1168 IVCPVTLLRQWKREAKKWYPKFHVELLHDSAQDFASGKKRAESDETDYESNSSRDNDYEQ 989
IVCPVTLLRQWKREAKKWYPKFHVELLHDSAQD A KKRA+S+ETDYESNS D+DYE+
Sbjct: 445 IVCPVTLLRQWKREAKKWYPKFHVELLHDSAQDSAPRKKRAKSEETDYESNSKSDSDYEK 504
Query: 988 SVPSRNTRKWESLINRVMRSESGLLITTYEQLRILGDQLLDIEWGYAVLDEGHKIRNPNA 809
SV S++TRKWESLINRVMRSESGLLITTYEQLRILG+QLLDI+WGYAVLDEGH+IRNPNA
Sbjct: 505 SVASKSTRKWESLINRVMRSESGLLITTYEQLRILGEQLLDIQWGYAVLDEGHRIRNPNA 564
Query: 808 EVTLVCKQLQTVHRIIMTGAPIQNKLTELWSLFDFVFPGKLGVLPIFEAEFAVPIAVGGY 629
EVTLVCKQLQTVHRIIMTGAPIQNKLTELWSLFDFVFPGKLGVLP+FEAEF+VPI+VGGY
Sbjct: 565 EVTLVCKQLQTVHRIIMTGAPIQNKLTELWSLFDFVFPGKLGVLPVFEAEFSVPISVGGY 624
Query: 628 ANASPLQVSTAYRCAVMLRDLIMPYLLRRMKADVNAQLPKKTEHVLFCSLTPEQVSAYRA 449
ANASPLQVSTAYRCAV+LRDLIMPYLLRRMKADVNAQLPKKTEHVLFCSLT EQVSAYRA
Sbjct: 625 ANASPLQVSTAYRCAVVLRDLIMPYLLRRMKADVNAQLPKKTEHVLFCSLTSEQVSAYRA 684
Query: 448 FLASTEVEDILDGQRNSLYGIDVMRKICNHPDLLEREHAFSNPDYGNPERSGKMKVVAQV 269
FLAST+VE ILDG RNSLYGIDVMRKICNHPDLLER+HAF++PDYGNPERSGKMKVVAQV
Sbjct: 685 FLASTDVEQILDGHRNSLYGIDVMRKICNHPDLLERDHAFNDPDYGNPERSGKMKVVAQV 744
Query: 268 LNVWKEQGHRVLLFTQTQQCLTFLRN 191
LNVWKEQGHRVLLFTQTQQ L N
Sbjct: 745 LNVWKEQGHRVLLFTQTQQMLNIFEN 770
Score = 137 bits (345), Expect = 8e-30
Identities = 65/76 (85%), Positives = 69/76 (90%)
Frame = -3
Query: 230 FYSNPTMLDIFEKYLTNSGHIYRRMDGLTPVKQRMALIDEFNDSSEVFVFILTTKVGGLG 51
F ML+IFE +LT SGHIYRRMDGLTPVKQRMALIDEFNDSSE+F+FILTTKVGGLG
Sbjct: 758 FTQTQQMLNIFENFLTTSGHIYRRMDGLTPVKQRMALIDEFNDSSEIFIFILTTKVGGLG 817
Query: 50 TNLTGANRVIIFDPDW 3
TNLTGANRVIIFDPDW
Sbjct: 818 TNLTGANRVIIFDPDW 833
>ref|XP_002307656.1| chromatin remodeling complex subunit [Populus trichocarpa]
gi|222857105|gb|EEE94652.1| chromatin remodeling complex
subunit [Populus trichocarpa]
Length = 1206
Score = 714 bits (1843), Expect = 0.0
Identities = 354/451 (78%), Positives = 393/451 (87%), Gaps = 5/451 (1%)
Frame = -1
Query: 1528 RPLPGRKWTKHVSFEDIQLEESENANGCLDTSSCENLEAQDVELS-EHESSYVTLEGGLK 1352
RPLPG+KW K S+ED + ESE++ L TS E +DV+ +++S ++TLEGGLK
Sbjct: 329 RPLPGKKWRKSASWED--MGESEDSGRNLVTSISE----EDVDDGYDNDSPFITLEGGLK 382
Query: 1351 IPENIFEALFDYQKVGVQWLWELHCQRAGGIIGDEMGLGKTVQVLSFLGALHFSGIYRPS 1172
IPE IF LFDYQKVGVQWLWELHCQRAGGIIGDEMGLGKT+QVLSFLGALHFS +Y+PS
Sbjct: 383 IPEAIFSKLFDYQKVGVQWLWELHCQRAGGIIGDEMGLGKTIQVLSFLGALHFSNMYKPS 442
Query: 1171 IIVCPVTLLRQWKREAKKWYPKFHVELLHDSAQDFASG----KKRAESDETDYESNSSRD 1004
I+VCPVTLLRQWKREA+KWYP+FHVELLHDSAQD + KKRA+S E+D E+ S D
Sbjct: 443 IVVCPVTLLRQWKREAQKWYPRFHVELLHDSAQDVSCRDPLKKKRAQSYESDCETEDSLD 502
Query: 1003 NDYEQSVPSRNTRKWESLINRVMRSESGLLITTYEQLRILGDQLLDIEWGYAVLDEGHKI 824
+DYE S+ R KW+SLINRV S+SGLLITTYEQLR+LG++LLD EWGYAVLDEGH+I
Sbjct: 503 SDYEGSISCRKANKWDSLINRVFESDSGLLITTYEQLRLLGEKLLDFEWGYAVLDEGHRI 562
Query: 823 RNPNAEVTLVCKQLQTVHRIIMTGAPIQNKLTELWSLFDFVFPGKLGVLPIFEAEFAVPI 644
RNPNAE+TLVCKQLQTVHRIIMTGAPIQNKLTELWSLFDFVFPGKLGV+P+FEAEFAVPI
Sbjct: 563 RNPNAEITLVCKQLQTVHRIIMTGAPIQNKLTELWSLFDFVFPGKLGVMPVFEAEFAVPI 622
Query: 643 AVGGYANASPLQVSTAYRCAVMLRDLIMPYLLRRMKADVNAQLPKKTEHVLFCSLTPEQV 464
+VGGYANASPLQVSTAYRCAV+LRDLIMPYLLRRMK DVNA LPKKTEHVLFCSLT EQ
Sbjct: 623 SVGGYANASPLQVSTAYRCAVVLRDLIMPYLLRRMKMDVNAHLPKKTEHVLFCSLTSEQR 682
Query: 463 SAYRAFLASTEVEDILDGQRNSLYGIDVMRKICNHPDLLEREHAFSNPDYGNPERSGKMK 284
S YRAFLASTEVE+ILDG RNSLYGIDVMRKICNHPDLLEREH++ NPDYGNPERSGKMK
Sbjct: 683 SVYRAFLASTEVENILDGSRNSLYGIDVMRKICNHPDLLEREHSYHNPDYGNPERSGKMK 742
Query: 283 VVAQVLNVWKEQGHRVLLFTQTQQCLTFLRN 191
VVAQVL VW+EQGHRVLLFTQTQQ L N
Sbjct: 743 VVAQVLKVWQEQGHRVLLFTQTQQMLDIFEN 773
Score = 119 bits (298), Expect = 2e-24
Identities = 54/76 (71%), Positives = 64/76 (84%)
Frame = -3
Query: 230 FYSNPTMLDIFEKYLTNSGHIYRRMDGLTPVKQRMALIDEFNDSSEVFVFILTTKVGGLG 51
F MLDIFE +L + G+ YRRMDG TP+K RM++IDEFN+S ++F+FILTTKVGGLG
Sbjct: 761 FTQTQQMLDIFENFLNSGGYNYRRMDGSTPIKLRMSIIDEFNNSGDIFIFILTTKVGGLG 820
Query: 50 TNLTGANRVIIFDPDW 3
TNLTGANRVIIFDPDW
Sbjct: 821 TNLTGANRVIIFDPDW 836
>ref|XP_002529848.1| DNA repair and recombination protein RAD26, putative [Ricinus
communis] gi|223530676|gb|EEF32549.1| DNA repair and
recombination protein RAD26, putative [Ricinus communis]
Length = 1230
Score = 714 bits (1842), Expect = 0.0
Identities = 348/445 (78%), Positives = 391/445 (87%), Gaps = 1/445 (0%)
Frame = -1
Query: 1528 RPLPGRKWTKHVSFEDIQLEESENANGCLDTSSCENLEAQDVE-LSEHESSYVTLEGGLK 1352
RPLPG+KW K ++ E+ LEESE TSS E + +D E + ++S + LEGGLK
Sbjct: 332 RPLPGQKWRKRITREENHLEESECTKNNSVTSSTEEEKLEDEEDVDGDDTSLIELEGGLK 391
Query: 1351 IPENIFEALFDYQKVGVQWLWELHCQRAGGIIGDEMGLGKTVQVLSFLGALHFSGIYRPS 1172
IPE IF LF+YQKVGVQWLWELHCQRAGGIIGDEMGLGKT+QVLSFLGALHFS +Y+PS
Sbjct: 392 IPEAIFSKLFEYQKVGVQWLWELHCQRAGGIIGDEMGLGKTIQVLSFLGALHFSNMYKPS 451
Query: 1171 IIVCPVTLLRQWKREAKKWYPKFHVELLHDSAQDFASGKKRAESDETDYESNSSRDNDYE 992
I++CPVTLLRQWKREA+KWYP+FHVELLHDSAQD GK RA+S ++D ES S D+DYE
Sbjct: 452 IVICPVTLLRQWKREAEKWYPRFHVELLHDSAQDLPHGK-RAKSFDSDNESEGSLDSDYE 510
Query: 991 QSVPSRNTRKWESLINRVMRSESGLLITTYEQLRILGDQLLDIEWGYAVLDEGHKIRNPN 812
++ S+ KW+SLINRV++SE+GLLITTYEQLR+LG++LLDIEWGYAVLDEGH+IRNPN
Sbjct: 511 GNISSKKANKWDSLINRVLKSEAGLLITTYEQLRLLGEKLLDIEWGYAVLDEGHRIRNPN 570
Query: 811 AEVTLVCKQLQTVHRIIMTGAPIQNKLTELWSLFDFVFPGKLGVLPIFEAEFAVPIAVGG 632
AEVTL+CKQLQTVHRIIMTGAPIQNKL+ELWSLFDFVFPGKLGVLP+FEAEFAVPI+VGG
Sbjct: 571 AEVTLICKQLQTVHRIIMTGAPIQNKLSELWSLFDFVFPGKLGVLPVFEAEFAVPISVGG 630
Query: 631 YANASPLQVSTAYRCAVMLRDLIMPYLLRRMKADVNAQLPKKTEHVLFCSLTPEQVSAYR 452
YANASPLQVSTAYRCAV+LRDLIMPYLLRRMK DVNAQLPKKTEHVLFCSLT EQ S YR
Sbjct: 631 YANASPLQVSTAYRCAVVLRDLIMPYLLRRMKVDVNAQLPKKTEHVLFCSLTAEQRSVYR 690
Query: 451 AFLASTEVEDILDGQRNSLYGIDVMRKICNHPDLLEREHAFSNPDYGNPERSGKMKVVAQ 272
AFLASTEVE I+DG RNSLYGIDVMRKICNHPDLLEREH+ NPDYGNP+RSGKM+VVAQ
Sbjct: 691 AFLASTEVEQIIDGSRNSLYGIDVMRKICNHPDLLEREHSCQNPDYGNPDRSGKMRVVAQ 750
Query: 271 VLNVWKEQGHRVLLFTQTQQCLTFL 197
VL VW+EQGHRVLLF QTQQ L L
Sbjct: 751 VLKVWREQGHRVLLFAQTQQMLDIL 775
Score = 124 bits (310), Expect = 9e-26
Identities = 58/76 (76%), Positives = 66/76 (86%)
Frame = -3
Query: 230 FYSNPTMLDIFEKYLTNSGHIYRRMDGLTPVKQRMALIDEFNDSSEVFVFILTTKVGGLG 51
F MLDI E +L + G+ YRRMDGLTP+KQRMALIDEFN+S++VF+FILTTKVGGLG
Sbjct: 765 FAQTQQMLDILEIFLNSGGYSYRRMDGLTPIKQRMALIDEFNNSNDVFIFILTTKVGGLG 824
Query: 50 TNLTGANRVIIFDPDW 3
TNLTGANRVIIFDPDW
Sbjct: 825 TNLTGANRVIIFDPDW 840
>emb|CAN67815.1| hypothetical protein VITISV_002502 [Vitis vinifera]
Length = 1249
Score = 710 bits (1833), Expect = 0.0
Identities = 347/447 (77%), Positives = 391/447 (87%), Gaps = 1/447 (0%)
Frame = -1
Query: 1528 RPLPGRKWTKHVSFEDIQLEESENANGCLDTSSCENLEAQDVE-LSEHESSYVTLEGGLK 1352
RPLPG+KW K +S E+ LEESE+ + L TSS E + +D+E ++E VTLEGGL+
Sbjct: 355 RPLPGKKWRKIISHEEELLEESEDTSDNLVTSSNEEVNREDIEDADDNEPPCVTLEGGLR 414
Query: 1351 IPENIFEALFDYQKVGVQWLWELHCQRAGGIIGDEMGLGKTVQVLSFLGALHFSGIYRPS 1172
IPE+IF LFDYQKVGVQWLWELHCQ+ GGIIGDEMGLGKT+QVLSFLGALHFS +Y+PS
Sbjct: 415 IPESIFSKLFDYQKVGVQWLWELHCQQVGGIIGDEMGLGKTIQVLSFLGALHFSNMYKPS 474
Query: 1171 IIVCPVTLLRQWKREAKKWYPKFHVELLHDSAQDFASGKKRAESDETDYESNSSRDNDYE 992
I++CPVTLLRQWKREAKKWY FHVE+LHDSAQD AS KKRA+S YES S D+D E
Sbjct: 475 IVICPVTLLRQWKREAKKWYQSFHVEILHDSAQDPASRKKRAKS----YESEDSLDSDDE 530
Query: 991 QSVPSRNTRKWESLINRVMRSESGLLITTYEQLRILGDQLLDIEWGYAVLDEGHKIRNPN 812
+++ S++T+KW+SLINRV+RS+SGLLITTYEQ+R+ +LLDI+WGYA+LDEGH+IRNPN
Sbjct: 531 ENLSSKDTKKWDSLINRVLRSQSGLLITTYEQIRLQAGKLLDIKWGYAILDEGHRIRNPN 590
Query: 811 AEVTLVCKQLQTVHRIIMTGAPIQNKLTELWSLFDFVFPGKLGVLPIFEAEFAVPIAVGG 632
AEVT++CKQLQTVHRIIMTGAPIQNKL ELWSLFDFVFPGKLGVLP+FEAEFAVPI+VGG
Sbjct: 591 AEVTILCKQLQTVHRIIMTGAPIQNKLAELWSLFDFVFPGKLGVLPVFEAEFAVPISVGG 650
Query: 631 YANASPLQVSTAYRCAVMLRDLIMPYLLRRMKADVNAQLPKKTEHVLFCSLTPEQVSAYR 452
YANA+PLQVSTAYRCAV+LRDLIMPYLLRRMKADVNAQLP KTEHVLFCSLT EQ S YR
Sbjct: 651 YANATPLQVSTAYRCAVVLRDLIMPYLLRRMKADVNAQLPNKTEHVLFCSLTTEQRSVYR 710
Query: 451 AFLASTEVEDILDGQRNSLYGIDVMRKICNHPDLLEREHAFSNPDYGNPERSGKMKVVAQ 272
AFLAS+EVE I DG RNSLYGIDVMRKICNHPDLLEREHA+ NPDYGNPERSGKMKVVA
Sbjct: 711 AFLASSEVEQIFDGSRNSLYGIDVMRKICNHPDLLEREHAYQNPDYGNPERSGKMKVVAH 770
Query: 271 VLNVWKEQGHRVLLFTQTQQCLTFLRN 191
VL WKEQGHRVLLF QTQQ L L N
Sbjct: 771 VLKGWKEQGHRVLLFAQTQQMLDILEN 797
Score = 122 bits (306), Expect = 3e-25
Identities = 56/76 (73%), Positives = 63/76 (82%)
Frame = -3
Query: 230 FYSNPTMLDIFEKYLTNSGHIYRRMDGLTPVKQRMALIDEFNDSSEVFVFILTTKVGGLG 51
F MLDI E +L G++YRRMDG TP+K RMALIDEFNDS +VF+FILTTKVGGLG
Sbjct: 785 FAQTQQMLDILENFLIAGGYVYRRMDGFTPIKHRMALIDEFNDSDDVFIFILTTKVGGLG 844
Query: 50 TNLTGANRVIIFDPDW 3
TNLTGANRVII+DPDW
Sbjct: 845 TNLTGANRVIIYDPDW 860
>ref|XP_002272543.1| PREDICTED: DNA excision repair protein ERCC-6-like [Vitis vinifera]
Length = 1227
Score = 708 bits (1827), Expect = 0.0
Identities = 346/447 (77%), Positives = 390/447 (87%), Gaps = 1/447 (0%)
Frame = -1
Query: 1528 RPLPGRKWTKHVSFEDIQLEESENANGCLDTSSCENLEAQDVE-LSEHESSYVTLEGGLK 1352
RPLP +KW K +S E+ LEESE+ + L TSS E + +D+E ++E VTLEGGL+
Sbjct: 333 RPLPSKKWRKIISHEEELLEESEDTSDNLVTSSNEEVNREDIEDADDNEPPCVTLEGGLR 392
Query: 1351 IPENIFEALFDYQKVGVQWLWELHCQRAGGIIGDEMGLGKTVQVLSFLGALHFSGIYRPS 1172
IPE+IF LFDYQKVGVQWLWELHCQ+ GGIIGDEMGLGKT+QVLSFLGALHFS +Y+PS
Sbjct: 393 IPESIFSKLFDYQKVGVQWLWELHCQQVGGIIGDEMGLGKTIQVLSFLGALHFSNMYKPS 452
Query: 1171 IIVCPVTLLRQWKREAKKWYPKFHVELLHDSAQDFASGKKRAESDETDYESNSSRDNDYE 992
I++CPVTLLRQWKREAKKWY FHVE+LHDSAQD AS KKRA+S YES S D+D E
Sbjct: 453 IVICPVTLLRQWKREAKKWYQSFHVEILHDSAQDPASRKKRAKS----YESEDSLDSDDE 508
Query: 991 QSVPSRNTRKWESLINRVMRSESGLLITTYEQLRILGDQLLDIEWGYAVLDEGHKIRNPN 812
+++ S++T+KW+SLINRV+RS+SGLLITTYEQ+R+ +LLDI+WGYA+LDEGH+IRNPN
Sbjct: 509 ENLSSKDTKKWDSLINRVLRSQSGLLITTYEQIRLQAGKLLDIKWGYAILDEGHRIRNPN 568
Query: 811 AEVTLVCKQLQTVHRIIMTGAPIQNKLTELWSLFDFVFPGKLGVLPIFEAEFAVPIAVGG 632
AEVT++CKQLQTVHRIIMTGAPIQNKL ELWSLFDFVFPGKLGVLP+FEAEFAVPI+VGG
Sbjct: 569 AEVTILCKQLQTVHRIIMTGAPIQNKLAELWSLFDFVFPGKLGVLPVFEAEFAVPISVGG 628
Query: 631 YANASPLQVSTAYRCAVMLRDLIMPYLLRRMKADVNAQLPKKTEHVLFCSLTPEQVSAYR 452
YANA+PLQVSTAYRCAV+LRDLIMPYLLRRMKADVNAQLP KTEHVLFCSLT EQ S YR
Sbjct: 629 YANATPLQVSTAYRCAVVLRDLIMPYLLRRMKADVNAQLPNKTEHVLFCSLTTEQRSVYR 688
Query: 451 AFLASTEVEDILDGQRNSLYGIDVMRKICNHPDLLEREHAFSNPDYGNPERSGKMKVVAQ 272
AFLAS+EVE I DG RNSLYGIDVMRKICNHPDLLEREHA+ NPDYGNPERSGKMKVVA
Sbjct: 689 AFLASSEVEQIFDGSRNSLYGIDVMRKICNHPDLLEREHAYQNPDYGNPERSGKMKVVAH 748
Query: 271 VLNVWKEQGHRVLLFTQTQQCLTFLRN 191
VL WKEQGHRVLLF QTQQ L L N
Sbjct: 749 VLKGWKEQGHRVLLFAQTQQMLDILEN 775
Score = 122 bits (306), Expect = 3e-25
Identities = 56/76 (73%), Positives = 63/76 (82%)
Frame = -3
Query: 230 FYSNPTMLDIFEKYLTNSGHIYRRMDGLTPVKQRMALIDEFNDSSEVFVFILTTKVGGLG 51
F MLDI E +L G++YRRMDG TP+K RMALIDEFNDS +VF+FILTTKVGGLG
Sbjct: 763 FAQTQQMLDILENFLIAGGYVYRRMDGFTPIKHRMALIDEFNDSDDVFIFILTTKVGGLG 822
Query: 50 TNLTGANRVIIFDPDW 3
TNLTGANRVII+DPDW
Sbjct: 823 TNLTGANRVIIYDPDW 838