BLASTX nr result

ID: Glycyrrhiza23_contig00016115 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00016115
         (434 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003541607.1| PREDICTED: DNA repair and recombination prot...   169   3e-40
ref|XP_003540522.1| PREDICTED: DNA repair protein rhp54-like [Gl...   167   1e-39
ref|XP_004170971.1| PREDICTED: SWI/SNF-related matrix-associated...   151   6e-35
ref|XP_004150074.1| PREDICTED: SWI/SNF-related matrix-associated...   151   6e-35
ref|XP_002275596.1| PREDICTED: DNA repair and recombination prot...   148   4e-34

>ref|XP_003541607.1| PREDICTED: DNA repair and recombination protein RDH54-like [Glycine
            max]
          Length = 1001

 Score =  169 bits (427), Expect = 3e-40
 Identities = 79/86 (91%), Positives = 81/86 (94%)
 Frame = +3

Query: 3    QAIGRAFRPGQTKKVFVYRLIAADSPEEEDHVTCFKKELISKMWFEWNEYCGDQAFEFET 182
            QAIGRAFRPGQ KKVFVYRL++ADSPEEEDH TCFKKELISKMWFEWNEYCGDQAFE E 
Sbjct: 899  QAIGRAFRPGQKKKVFVYRLVSADSPEEEDHSTCFKKELISKMWFEWNEYCGDQAFEVEE 958

Query: 183  VGVKECGDLFLESPLLGEDVKALYKR 260
            VGVKEC DLFLESPLLGEDVKALYKR
Sbjct: 959  VGVKECDDLFLESPLLGEDVKALYKR 984


>ref|XP_003540522.1| PREDICTED: DNA repair protein rhp54-like [Glycine max]
          Length = 883

 Score =  167 bits (422), Expect = 1e-39
 Identities = 78/86 (90%), Positives = 81/86 (94%)
 Frame = +3

Query: 3    QAIGRAFRPGQTKKVFVYRLIAADSPEEEDHVTCFKKELISKMWFEWNEYCGDQAFEFET 182
            QAIGRAFRPGQ KKVFVYRL++ADSPEEEDH TCFKKELISKMWFEWNEYCGD+AFE E 
Sbjct: 798  QAIGRAFRPGQMKKVFVYRLVSADSPEEEDHNTCFKKELISKMWFEWNEYCGDRAFEVEA 857

Query: 183  VGVKECGDLFLESPLLGEDVKALYKR 260
            V VKECGDLFLESPLLGEDVKALYKR
Sbjct: 858  VEVKECGDLFLESPLLGEDVKALYKR 883


>ref|XP_004170971.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
            regulator of chromatin subfamily A containing DEAD/H box
            1B-like [Cucumis sativus]
          Length = 903

 Score =  151 bits (381), Expect = 6e-35
 Identities = 69/86 (80%), Positives = 75/86 (87%)
 Frame = +3

Query: 3    QAIGRAFRPGQTKKVFVYRLIAADSPEEEDHVTCFKKELISKMWFEWNEYCGDQAFEFET 182
            QAIGRAFRPGQTKKVF YRL+A DSPEE DH TCFKKELI+KMWFEWNEYCG   FE ET
Sbjct: 818  QAIGRAFRPGQTKKVFAYRLVAGDSPEEGDHSTCFKKELIAKMWFEWNEYCGYHDFEVET 877

Query: 183  VGVKECGDLFLESPLLGEDVKALYKR 260
            V VK+CGD FLE+PLLG+DVK LY+R
Sbjct: 878  VDVKQCGDNFLETPLLGQDVKVLYRR 903


>ref|XP_004150074.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
            regulator of chromatin subfamily A containing DEAD/H box
            1B-like [Cucumis sativus]
          Length = 903

 Score =  151 bits (381), Expect = 6e-35
 Identities = 69/86 (80%), Positives = 75/86 (87%)
 Frame = +3

Query: 3    QAIGRAFRPGQTKKVFVYRLIAADSPEEEDHVTCFKKELISKMWFEWNEYCGDQAFEFET 182
            QAIGRAFRPGQTKKVF YRL+A DSPEE DH TCFKKELI+KMWFEWNEYCG   FE ET
Sbjct: 818  QAIGRAFRPGQTKKVFAYRLVAGDSPEEGDHSTCFKKELIAKMWFEWNEYCGYHDFEVET 877

Query: 183  VGVKECGDLFLESPLLGEDVKALYKR 260
            V VK+CGD FLE+PLLG+DVK LY+R
Sbjct: 878  VDVKQCGDNFLETPLLGQDVKVLYRR 903


>ref|XP_002275596.1| PREDICTED: DNA repair and recombination protein RAD54-like [Vitis
            vinifera]
          Length = 944

 Score =  148 bits (374), Expect = 4e-34
 Identities = 70/86 (81%), Positives = 74/86 (86%)
 Frame = +3

Query: 3    QAIGRAFRPGQTKKVFVYRLIAADSPEEEDHVTCFKKELISKMWFEWNEYCGDQAFEFET 182
            QAIGRAFRPGQ KKV VY+L+AADSPEEEDH TCFKKELISKMWFEWNEYCG+  FE ET
Sbjct: 859  QAIGRAFRPGQKKKVHVYKLVAADSPEEEDHNTCFKKELISKMWFEWNEYCGNHEFEAET 918

Query: 183  VGVKECGDLFLESPLLGEDVKALYKR 260
            V V + GDLFLESPLL EDV  LYKR
Sbjct: 919  VNVSDSGDLFLESPLLREDVTVLYKR 944


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