BLASTX nr result

ID: Glycyrrhiza23_contig00016111 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00016111
         (664 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003618594.1| Lamin-like protein [Medicago truncatula] gi|...   293   2e-77
ref|NP_001237157.1| uncharacterized protein LOC100305564 precurs...   265   6e-69
ref|XP_002324082.1| predicted protein [Populus trichocarpa] gi|1...   263   2e-68
ref|XP_002284104.1| PREDICTED: lamin-like protein [Vitis vinifera]    263   3e-68
emb|CBI22267.3| unnamed protein product [Vitis vinifera]              261   6e-68

>ref|XP_003618594.1| Lamin-like protein [Medicago truncatula] gi|87240662|gb|ABD32520.1|
           Blue (type 1) copper domain [Medicago truncatula]
           gi|355493609|gb|AES74812.1| Lamin-like protein [Medicago
           truncatula] gi|388499076|gb|AFK37604.1| unknown
           [Medicago truncatula]
          Length = 179

 Score =  293 bits (751), Expect = 2e-77
 Identities = 137/162 (84%), Positives = 147/162 (90%)
 Frame = +1

Query: 178 LVLLFLSCAVLVMLPEASATRWTVGGNMGWNTNFNYTTWAKGKHFYNGDWLFFVYDRNQM 357
           +V L L  AVLVMLP  SATR+ VGG MGWNTNFNYTTWAKGKHFYNGDWLFFVYDRNQM
Sbjct: 17  MVFLLLGFAVLVMLPMVSATRFMVGGRMGWNTNFNYTTWAKGKHFYNGDWLFFVYDRNQM 76

Query: 358 NVLEVNKTDYESCNSDHPLHNWTTGAGRDVVPLNVTRNYYFVSGKGFCFGGMKIAVHVEN 537
           NVLEVNKTDYE+CNSDHPLHNWTTGAGRDVVPLNVTR+YYF+SGKGFCFGGMK+AVHVEN
Sbjct: 77  NVLEVNKTDYETCNSDHPLHNWTTGAGRDVVPLNVTRHYYFISGKGFCFGGMKLAVHVEN 136

Query: 538 LPPPPKAAPIKSWAPTLSSKGHNILLMPLVFAIGAAWDSFIH 663
           LPPPPKAAP ++ A  LSSKG  I LMP+VFAIGAAWDSFI+
Sbjct: 137 LPPPPKAAPERAAATFLSSKG-QIFLMPIVFAIGAAWDSFIY 177


>ref|NP_001237157.1| uncharacterized protein LOC100305564 precursor [Glycine max]
           gi|255625927|gb|ACU13308.1| unknown [Glycine max]
          Length = 169

 Score =  265 bits (677), Expect = 6e-69
 Identities = 123/162 (75%), Positives = 139/162 (85%)
 Frame = +1

Query: 178 LVLLFLSCAVLVMLPEASATRWTVGGNMGWNTNFNYTTWAKGKHFYNGDWLFFVYDRNQM 357
           ++LL L+  VL+MLPEASAT++TVG N  WN N NYT WAKGKHFY GDWL+FVYDRNQ 
Sbjct: 7   VLLLLLAFTVLLMLPEASATKFTVGNNQFWNPNINYTEWAKGKHFYLGDWLYFVYDRNQA 66

Query: 358 NVLEVNKTDYESCNSDHPLHNWTTGAGRDVVPLNVTRNYYFVSGKGFCFGGMKIAVHVEN 537
           +VLEVNKTDYE+CNSDHPL NWT GAGRDVVPLNVT+ YY +SG+GFCF GMKIAVHVE 
Sbjct: 67  SVLEVNKTDYETCNSDHPLTNWTRGAGRDVVPLNVTKTYYIISGRGFCFSGMKIAVHVEK 126

Query: 538 LPPPPKAAPIKSWAPTLSSKGHNILLMPLVFAIGAAWDSFIH 663
           LPPPPKA P+KS APTL S+   ILLMP+VFAIGAAWD+FIH
Sbjct: 127 LPPPPKAVPVKSAAPTLFSQ-DRILLMPVVFAIGAAWDAFIH 167


>ref|XP_002324082.1| predicted protein [Populus trichocarpa] gi|118482789|gb|ABK93312.1|
           unknown [Populus trichocarpa]
           gi|222867084|gb|EEF04215.1| predicted protein [Populus
           trichocarpa]
          Length = 176

 Score =  263 bits (673), Expect = 2e-68
 Identities = 117/162 (72%), Positives = 137/162 (84%)
 Frame = +1

Query: 175 VLVLLFLSCAVLVMLPEASATRWTVGGNMGWNTNFNYTTWAKGKHFYNGDWLFFVYDRNQ 354
           ++ L  L  A++VM+PE SATRWTVG NMGW +N NYT WA+GKHFYNGDWLFFVYDRNQ
Sbjct: 12  MVALAVLVFAMVVMVPEVSATRWTVGSNMGWTSNVNYTIWAQGKHFYNGDWLFFVYDRNQ 71

Query: 355 MNVLEVNKTDYESCNSDHPLHNWTTGAGRDVVPLNVTRNYYFVSGKGFCFGGMKIAVHVE 534
           MN+LEVNKTDYESCNSDHPLHNWT GAGRDVVPLNVTRNYYF+SGKGFC+GGMK+AVHVE
Sbjct: 72  MNILEVNKTDYESCNSDHPLHNWTRGAGRDVVPLNVTRNYYFISGKGFCYGGMKLAVHVE 131

Query: 535 NLPPPPKAAPIKSWAPTLSSKGHNILLMPLVFAIGAAWDSFI 660
           N PPPP A+P+   + + SS   +  ++P VFAIGA WD+F+
Sbjct: 132 NPPPPPTASPLDEKSGSPSSIFRSQYVLPTVFAIGALWDAFV 173


>ref|XP_002284104.1| PREDICTED: lamin-like protein [Vitis vinifera]
          Length = 171

 Score =  263 bits (671), Expect = 3e-68
 Identities = 117/156 (75%), Positives = 133/156 (85%)
 Frame = +1

Query: 193 LSCAVLVMLPEASATRWTVGGNMGWNTNFNYTTWAKGKHFYNGDWLFFVYDRNQMNVLEV 372
           L CAV++MLP+ SATRWTVGGN GW+TN NYT WAK KHFYNGDWLFFVYDRNQMNVLEV
Sbjct: 12  LMCAVVLMLPDVSATRWTVGGNQGWSTNVNYTVWAKDKHFYNGDWLFFVYDRNQMNVLEV 71

Query: 373 NKTDYESCNSDHPLHNWTTGAGRDVVPLNVTRNYYFVSGKGFCFGGMKIAVHVENLPPPP 552
           N+T+YESCNSDHPLHNWTTGAGRDVVPLNVTR YYF+SGKGFC+ GMKIA++VEN PPPP
Sbjct: 72  NETNYESCNSDHPLHNWTTGAGRDVVPLNVTRKYYFLSGKGFCYSGMKIAINVENPPPPP 131

Query: 553 KAAPIKSWAPTLSSKGHNILLMPLVFAIGAAWDSFI 660
            A+PIK    + SS     +++P VFAI A WDSF+
Sbjct: 132 SASPIKESNDSPSSNYRGQIVVPAVFAIAAVWDSFL 167


>emb|CBI22267.3| unnamed protein product [Vitis vinifera]
          Length = 159

 Score =  261 bits (668), Expect = 6e-68
 Identities = 116/154 (75%), Positives = 132/154 (85%)
 Frame = +1

Query: 199 CAVLVMLPEASATRWTVGGNMGWNTNFNYTTWAKGKHFYNGDWLFFVYDRNQMNVLEVNK 378
           CAV++MLP+ SATRWTVGGN GW+TN NYT WAK KHFYNGDWLFFVYDRNQMNVLEVN+
Sbjct: 2   CAVVLMLPDVSATRWTVGGNQGWSTNVNYTVWAKDKHFYNGDWLFFVYDRNQMNVLEVNE 61

Query: 379 TDYESCNSDHPLHNWTTGAGRDVVPLNVTRNYYFVSGKGFCFGGMKIAVHVENLPPPPKA 558
           T+YESCNSDHPLHNWTTGAGRDVVPLNVTR YYF+SGKGFC+ GMKIA++VEN PPPP A
Sbjct: 62  TNYESCNSDHPLHNWTTGAGRDVVPLNVTRKYYFLSGKGFCYSGMKIAINVENPPPPPSA 121

Query: 559 APIKSWAPTLSSKGHNILLMPLVFAIGAAWDSFI 660
           +PIK    + SS     +++P VFAI A WDSF+
Sbjct: 122 SPIKESNDSPSSNYRGQIVVPAVFAIAAVWDSFL 155


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