BLASTX nr result

ID: Glycyrrhiza23_contig00016082 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00016082
         (951 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003554312.1| PREDICTED: WD repeat-containing protein 26-l...   165   2e-38
ref|XP_002533626.1| WD-repeat protein, putative [Ricinus communi...   146   6e-33
ref|NP_199205.1| transducin/WD40 domain-containing protein [Arab...   142   9e-32
gb|AAL07102.1| putative WD-repeat protein [Arabidopsis thaliana]      142   9e-32
ref|XP_002865396.1| transducin family protein [Arabidopsis lyrat...   142   1e-31

>ref|XP_003554312.1| PREDICTED: WD repeat-containing protein 26-like [Glycine max]
          Length = 523

 Score =  165 bits (417), Expect = 2e-38
 Identities = 85/129 (65%), Positives = 103/129 (79%)
 Frame = +1

Query: 562 METHSEVLGSKGLIKKQEFVRIIVQCLYSLGYTKSASCLESESGVSYKSKEFQLLESHVL 741
           ME   EVLGSKGLI++ EFVRII+QCLYSLGY+ SASCLESESG+SYKS E +LLES +L
Sbjct: 1   MENPCEVLGSKGLIRRHEFVRIIIQCLYSLGYSSSASCLESESGISYKSNEVKLLESLIL 60

Query: 742 GGNWDACVSFLNSMREYVFGEAIESALFLVFRGCLMEYMKRGEDALALDVLRKRVSALHM 921
            G+WD  + +LNS+++ + GE  ESALFLVFR C+MEY+  GE ALAL VLRK+VSAL  
Sbjct: 61  NGSWDESIDYLNSIKDEL-GETRESALFLVFRQCVMEYLNCGEYALALGVLRKQVSALDA 119

Query: 922 DRYKVHSLA 948
            + KVHS A
Sbjct: 120 GKCKVHSFA 128


>ref|XP_002533626.1| WD-repeat protein, putative [Ricinus communis]
           gi|223526484|gb|EEF28755.1| WD-repeat protein, putative
           [Ricinus communis]
          Length = 523

 Score =  146 bits (369), Expect = 6e-33
 Identities = 74/130 (56%), Positives = 101/130 (77%)
 Frame = +1

Query: 562 METHSEVLGSKGLIKKQEFVRIIVQCLYSLGYTKSASCLESESGVSYKSKEFQLLESHVL 741
           ME  + V+G+KGLIK+ EFVR+I+Q L+SLGY KSASCLE ESG+SYKS +F+LLES +L
Sbjct: 1   MENSTVVIGTKGLIKRHEFVRVIIQSLWSLGYKKSASCLEIESGISYKSVDFELLESQIL 60

Query: 742 GGNWDACVSFLNSMREYVFGEAIESALFLVFRGCLMEYMKRGEDALALDVLRKRVSALHM 921
            GNW+ CV+ LN+++E +  E   SALFLV + CL+E +  G+D++AL VLRK+V AL +
Sbjct: 61  EGNWNGCVNTLNTVKE-LMDETRASALFLVIKQCLLECLSCGDDSMALAVLRKQVPALRL 119

Query: 922 DRYKVHSLAH 951
            R KV +LA+
Sbjct: 120 GREKVCNLAY 129


>ref|NP_199205.1| transducin/WD40 domain-containing protein [Arabidopsis thaliana]
           gi|9758551|dbj|BAB09052.1| WD-repeat protein-like
           [Arabidopsis thaliana] gi|110742722|dbj|BAE99272.1|
           WD-repeat protein-like [Arabidopsis thaliana]
           gi|148535209|gb|ABQ85545.1| will die slowly [Arabidopsis
           thaliana] gi|332007645|gb|AED95028.1| transducin/WD40
           domain-containing protein [Arabidopsis thaliana]
          Length = 523

 Score =  142 bits (359), Expect = 9e-32
 Identities = 68/124 (54%), Positives = 92/124 (74%)
 Frame = +1

Query: 577 EVLGSKGLIKKQEFVRIIVQCLYSLGYTKSASCLESESGVSYKSKEFQLLESHVLGGNWD 756
           EVLGSKGL+KK EF+RI+VQCLYSLG+  SASCLE ES + YK+ + + LE  VL GNWD
Sbjct: 7   EVLGSKGLLKKHEFIRILVQCLYSLGFKNSASCLEFESKILYKTADSEFLEKQVLSGNWD 66

Query: 757 ACVSFLNSMREYVFGEAIESALFLVFRGCLMEYMKRGEDALALDVLRKRVSALHMDRYKV 936
           +CV  L+ + +    +   +AL+LVF+ CL+EY+KRG+ +LAL+VLRK+   L M + K+
Sbjct: 67  SCVQVLDRIFDNSMDDTRNTALYLVFKQCLLEYLKRGDVSLALNVLRKQAPLLRMGKEKI 126

Query: 937 HSLA 948
           H LA
Sbjct: 127 HRLA 130


>gb|AAL07102.1| putative WD-repeat protein [Arabidopsis thaliana]
          Length = 308

 Score =  142 bits (359), Expect = 9e-32
 Identities = 68/124 (54%), Positives = 92/124 (74%)
 Frame = +1

Query: 577 EVLGSKGLIKKQEFVRIIVQCLYSLGYTKSASCLESESGVSYKSKEFQLLESHVLGGNWD 756
           EVLGSKGL+KK EF+RI+VQCLYSLG+  SASCLE ES + YK+ + + LE  VL GNWD
Sbjct: 7   EVLGSKGLLKKHEFIRILVQCLYSLGFKNSASCLEFESKILYKTADSEFLEKQVLSGNWD 66

Query: 757 ACVSFLNSMREYVFGEAIESALFLVFRGCLMEYMKRGEDALALDVLRKRVSALHMDRYKV 936
           +CV  L+ + +    +   +AL+LVF+ CL+EY+KRG+ +LAL+VLRK+   L M + K+
Sbjct: 67  SCVQVLDRIFDNSMDDTRNTALYLVFKQCLLEYLKRGDVSLALNVLRKQAPLLRMGKEKI 126

Query: 937 HSLA 948
           H LA
Sbjct: 127 HRLA 130


>ref|XP_002865396.1| transducin family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297311231|gb|EFH41655.1| transducin family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 523

 Score =  142 bits (358), Expect = 1e-31
 Identities = 67/124 (54%), Positives = 95/124 (76%)
 Frame = +1

Query: 577 EVLGSKGLIKKQEFVRIIVQCLYSLGYTKSASCLESESGVSYKSKEFQLLESHVLGGNWD 756
           EVLGSKGL+KK EF+RI+VQCLYSLG+  SASCLE ES +S KS +++ LE  VL G+WD
Sbjct: 7   EVLGSKGLLKKHEFIRILVQCLYSLGFKNSASCLEIESNISCKSADYESLEKRVLSGDWD 66

Query: 757 ACVSFLNSMREYVFGEAIESALFLVFRGCLMEYMKRGEDALALDVLRKRVSALHMDRYKV 936
           +CV+ L+ + ++   +   +A++LVF+ CL+EY+KRG+ +LAL+VLRK+   L M + K+
Sbjct: 67  SCVAVLDRIFDHSKDDTRNTAVYLVFKQCLLEYLKRGDVSLALNVLRKQAPMLRMGKEKI 126

Query: 937 HSLA 948
           H LA
Sbjct: 127 HRLA 130


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