BLASTX nr result

ID: Glycyrrhiza23_contig00016016 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00016016
         (491 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003532731.1| PREDICTED: pentatricopeptide repeat-containi...   168   5e-40
ref|XP_004140061.1| PREDICTED: pentatricopeptide repeat-containi...   160   8e-38
emb|CBI26526.3| unnamed protein product [Vitis vinifera]              159   2e-37
ref|XP_002274101.1| PREDICTED: pentatricopeptide repeat-containi...   159   2e-37
gb|AAB61077.1| similar to N. tabacum membrane-associated salt-in...   150   1e-34

>ref|XP_003532731.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g27270-like [Glycine max]
          Length = 1079

 Score =  168 bits (425), Expect = 5e-40
 Identities = 83/114 (72%), Positives = 93/114 (81%), Gaps = 7/114 (6%)
 Frame = +1

Query: 169 SVQRDDPWSPREGDP-------RKPKNPLSDDNARRIIKAKAQYLSVHRRNQGPQAHNPR 327
           ++QRD PWSP  GDP       R PK PLSDDNARRIIK KA Y S+ RRNQGPQA  PR
Sbjct: 46  TIQRD-PWSPTSGDPTRPKPRSRNPKKPLSDDNARRIIKGKAAYQSILRRNQGPQAQTPR 104

Query: 328 WIKRTPEQMVQYLQDDRNGHLYGKHVVAAIKKVRALTRVPDGDYDMRMVMASFV 489
           WIKRTPEQMV+YLQDDRNG LYG+HV+AA+KKVR+L++  DGDYDMRMVMASFV
Sbjct: 105 WIKRTPEQMVRYLQDDRNGQLYGRHVLAAVKKVRSLSQRVDGDYDMRMVMASFV 158


>ref|XP_004140061.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g27270-like [Cucumis sativus]
          Length = 1062

 Score =  160 bits (406), Expect = 8e-38
 Identities = 78/109 (71%), Positives = 91/109 (83%), Gaps = 7/109 (6%)
 Frame = +1

Query: 184 DPWSPREGDPRKPK-------NPLSDDNARRIIKAKAQYLSVHRRNQGPQAHNPRWIKRT 342
           DPWS  +G+P +PK        PLSDDNARRIIKAKAQYLSV RRNQGP+A  P+WIKRT
Sbjct: 43  DPWSLSDGNPARPKPRSKNAKKPLSDDNARRIIKAKAQYLSVLRRNQGPRAQTPKWIKRT 102

Query: 343 PEQMVQYLQDDRNGHLYGKHVVAAIKKVRALTRVPDGDYDMRMVMASFV 489
           PEQMVQYL+DDRNGHLYGKHVVAAI+ VR+L++  +G+Y+MRM MASFV
Sbjct: 103 PEQMVQYLEDDRNGHLYGKHVVAAIRHVRSLSQKTEGEYNMRMEMASFV 151


>emb|CBI26526.3| unnamed protein product [Vitis vinifera]
          Length = 1005

 Score =  159 bits (402), Expect = 2e-37
 Identities = 80/107 (74%), Positives = 86/107 (80%), Gaps = 5/107 (4%)
 Frame = +1

Query: 184 DPWSPREGDPRKP-----KNPLSDDNARRIIKAKAQYLSVHRRNQGPQAHNPRWIKRTPE 348
           DPWS   G+  KP     KNPLSDDNARRIIK KA+YLSV RRNQGPQA  P+WIKRTPE
Sbjct: 48  DPWSLSTGNRPKPISKNPKNPLSDDNARRIIKGKARYLSVLRRNQGPQAQTPKWIKRTPE 107

Query: 349 QMVQYLQDDRNGHLYGKHVVAAIKKVRALTRVPDGDYDMRMVMASFV 489
           QMVQYLQDDRNGHLYGKHVVAAI+ VR+L   PDG Y+MR VM SFV
Sbjct: 108 QMVQYLQDDRNGHLYGKHVVAAIRIVRSLAARPDGSYNMREVMGSFV 154


>ref|XP_002274101.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g27270-like [Vitis vinifera]
          Length = 1071

 Score =  159 bits (402), Expect = 2e-37
 Identities = 80/107 (74%), Positives = 86/107 (80%), Gaps = 5/107 (4%)
 Frame = +1

Query: 184 DPWSPREGDPRKP-----KNPLSDDNARRIIKAKAQYLSVHRRNQGPQAHNPRWIKRTPE 348
           DPWS   G+  KP     KNPLSDDNARRIIK KA+YLSV RRNQGPQA  P+WIKRTPE
Sbjct: 48  DPWSLSTGNRPKPISKNPKNPLSDDNARRIIKGKARYLSVLRRNQGPQAQTPKWIKRTPE 107

Query: 349 QMVQYLQDDRNGHLYGKHVVAAIKKVRALTRVPDGDYDMRMVMASFV 489
           QMVQYLQDDRNGHLYGKHVVAAI+ VR+L   PDG Y+MR VM SFV
Sbjct: 108 QMVQYLQDDRNGHLYGKHVVAAIRIVRSLAARPDGSYNMREVMGSFV 154


>gb|AAB61077.1| similar to N. tabacum membrane-associated salt-inducible protein
           (PID:g473874) [Arabidopsis thaliana]
          Length = 934

 Score =  150 bits (378), Expect = 1e-34
 Identities = 77/115 (66%), Positives = 87/115 (75%), Gaps = 7/115 (6%)
 Frame = +1

Query: 166 SSVQRDDPWSPREGDPRKPK-------NPLSDDNARRIIKAKAQYLSVHRRNQGPQAHNP 324
           SS  R DPWS  +G+P KPK       +PLSDD+ARRIIK KAQYLS  RRNQG QA  P
Sbjct: 36  SSKVRPDPWSLSDGNPEKPKPRYERPKHPLSDDDARRIIKKKAQYLSTLRRNQGSQAMTP 95

Query: 325 RWIKRTPEQMVQYLQDDRNGHLYGKHVVAAIKKVRALTRVPDGDYDMRMVMASFV 489
           +WIKRTPEQMVQYL+DDRNG +YGKHVVAAIK VR L++   G  DMR VM+SFV
Sbjct: 96  KWIKRTPEQMVQYLEDDRNGQMYGKHVVAAIKTVRGLSQRRQGSDDMRFVMSSFV 150


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