BLASTX nr result
ID: Glycyrrhiza23_contig00015973
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza23_contig00015973
(1314 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003625923.1| Phytochrome A-associated F-box protein [Medi... 409 e-111
gb|AFK45289.1| unknown [Medicago truncatula] 407 e-111
ref|XP_003521567.1| PREDICTED: phytochrome A-associated F-box pr... 372 e-101
ref|XP_002266159.1| PREDICTED: phytochrome A-associated F-box pr... 330 4e-88
ref|XP_002302709.1| predicted protein [Populus trichocarpa] gi|2... 330 4e-88
>ref|XP_003625923.1| Phytochrome A-associated F-box protein [Medicago truncatula]
gi|357516351|ref|XP_003628464.1| Phytochrome A-associated
F-box protein [Medicago truncatula]
gi|355500938|gb|AES82141.1| Phytochrome A-associated
F-box protein [Medicago truncatula]
gi|355522486|gb|AET02940.1| Phytochrome A-associated
F-box protein [Medicago truncatula]
Length = 304
Score = 409 bits (1050), Expect = e-111
Identities = 198/303 (65%), Positives = 223/303 (73%), Gaps = 5/303 (1%)
Frame = +1
Query: 118 LFSELTDDIVLKILWKVEDDPRDWGRLSCVSTRFRSLIRDFCWKNKCALTIPSELL-SAS 294
+ SELTDDI+LKILWKVE+DPRDW RLSCVST+ SLI DFCWKNK ++ IPSELL S+S
Sbjct: 1 MLSELTDDIILKILWKVEEDPRDWARLSCVSTKLNSLIHDFCWKNKSSIIIPSELLLSSS 60
Query: 295 DPFSLHKLSFCCPGPLHAGLLF---DSDEEQHYPLTTXXXXXXXXXXXXXXXXXXXXXXX 465
SLHKL FCCPGPLHAG+LF D +EQH+
Sbjct: 61 QDLSLHKLPFCCPGPLHAGILFNTADFPDEQHHQQPITSSSSSTTPSSSLPPQTNECSSY 120
Query: 466 XXXXXXXXXXTLYAATESQQQEQVQPPHSPENEIRHGVVVAPCASKRRKVCGSWSSHLAS 645
TLYA +E+ Q + E EIR GVV P +K+RKV GS SSHLA+
Sbjct: 121 WSLYDDLYHDTLYADSEAHHHLQQGQEQTNEEEIRTGVVDVPPEAKKRKVNGSLSSHLAT 180
Query: 646 GKWNLSREQGSKLLARQFRDDCLYVCDWPGCVHSEEKREYRLFRGVFKNFKRTRVWRTVN 825
GKW LSREQGSKLLARQFRDDCLYVCDWPGCVH EEKR+YRLFRG+F NFK+TRVW+TVN
Sbjct: 181 GKWTLSREQGSKLLARQFRDDCLYVCDWPGCVHLEEKRKYRLFRGIFMNFKKTRVWKTVN 240
Query: 826 D-GNRRKLDLPCAFCNCKHTWDLHSAFCLRRGFGFHDDGEPVVRAYVCDNGHVSGAWTDV 1002
D NR+K+DL CAFC+C HTWDLHSAFCLRRGFG+HDDGEPVVRAYVCDNGHVSGAWTD+
Sbjct: 241 DISNRKKIDLACAFCSCNHTWDLHSAFCLRRGFGYHDDGEPVVRAYVCDNGHVSGAWTDM 300
Query: 1003 PMY 1011
PMY
Sbjct: 301 PMY 303
>gb|AFK45289.1| unknown [Medicago truncatula]
Length = 304
Score = 407 bits (1046), Expect = e-111
Identities = 197/303 (65%), Positives = 222/303 (73%), Gaps = 5/303 (1%)
Frame = +1
Query: 118 LFSELTDDIVLKILWKVEDDPRDWGRLSCVSTRFRSLIRDFCWKNKCALTIPSELL-SAS 294
+ SELTDDI+LKILWKVE+DPRDW RLSCVST+ SLI DFCWKNK ++ IPSELL S+S
Sbjct: 1 MLSELTDDIILKILWKVEEDPRDWARLSCVSTKLNSLIHDFCWKNKSSIIIPSELLLSSS 60
Query: 295 DPFSLHKLSFCCPGPLHAGLLF---DSDEEQHYPLTTXXXXXXXXXXXXXXXXXXXXXXX 465
SLHKL FCCPGPLHAG+LF D +EQH+
Sbjct: 61 QDLSLHKLPFCCPGPLHAGILFNTADFPDEQHHQQPITSSSSSTTPSSSLPPQTNECSSY 120
Query: 466 XXXXXXXXXXTLYAATESQQQEQVQPPHSPENEIRHGVVVAPCASKRRKVCGSWSSHLAS 645
TLYA +E+ Q + E EIR GVV P +K+RKV GS SSHLA+
Sbjct: 121 WSLYDDLYHDTLYADSEAHHHLQQGQEQTNEEEIRTGVVDVPPEAKKRKVNGSLSSHLAT 180
Query: 646 GKWNLSREQGSKLLARQFRDDCLYVCDWPGCVHSEEKREYRLFRGVFKNFKRTRVWRTVN 825
GKW LSREQGSKLLARQFRDDCLYVCDWPGCVH EEKR+YRLFRG+F NFK+TRVW+TVN
Sbjct: 181 GKWTLSREQGSKLLARQFRDDCLYVCDWPGCVHLEEKRKYRLFRGIFMNFKKTRVWKTVN 240
Query: 826 D-GNRRKLDLPCAFCNCKHTWDLHSAFCLRRGFGFHDDGEPVVRAYVCDNGHVSGAWTDV 1002
D NR+K+DL C FC+C HTWDLHSAFCLRRGFG+HDDGEPVVRAYVCDNGHVSGAWTD+
Sbjct: 241 DISNRKKIDLACVFCSCNHTWDLHSAFCLRRGFGYHDDGEPVVRAYVCDNGHVSGAWTDM 300
Query: 1003 PMY 1011
PMY
Sbjct: 301 PMY 303
>ref|XP_003521567.1| PREDICTED: phytochrome A-associated F-box protein-like [Glycine max]
Length = 327
Score = 372 bits (956), Expect = e-101
Identities = 186/327 (56%), Positives = 218/327 (66%), Gaps = 23/327 (7%)
Frame = +1
Query: 103 QRGKMLFSELTDDIVLKILWKVEDDPRDWGRLSCVSTRFRSLIRDFCWKNKCALTIPSEL 282
++ K LFSELTDDIVL I +K+EDDPR W RL+CV T+F SL+RDFCWK KC+LTIP +L
Sbjct: 6 EKKKNLFSELTDDIVLNIFYKLEDDPRHWARLACVCTKFSSLVRDFCWKTKCSLTIPQDL 65
Query: 283 LSAS---DPFSLHKLSFCCPGPLHAGLLFDS------------------DEEQHYPLTTX 399
LSA+ P SLHKLSFCCPG HAGLLFD+ D+
Sbjct: 66 LSAAASDPPLSLHKLSFCCPGLRHAGLLFDTSDFGLERDLGPGNFNVITDDSPSNTTPPP 125
Query: 400 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTLYAATESQQQEQVQPPHSPENEIRHGV 579
TLY TES+ P + +R GV
Sbjct: 126 PPPPPQQQQQQPPQSDDCSSSCWSLYDDLYYDTLYVPTESES-----PRLTESVSVRAGV 180
Query: 580 VVAPCA--SKRRKVCGSWSSHLASGKWNLSREQGSKLLARQFRDDCLYVCDWPGCVHSEE 753
VA + SK+RK+ +WSSHLASG W LSREQGSKLLAR+FR DCLYVC+WPGCVH EE
Sbjct: 181 DVASISACSKKRKLSRAWSSHLASGSWTLSREQGSKLLARKFRYDCLYVCEWPGCVHKEE 240
Query: 754 KREYRLFRGVFKNFKRTRVWRTVNDGNRRKLDLPCAFCNCKHTWDLHSAFCLRRGFGFHD 933
KR+Y LFRGVFKNF+RT VWRT+ DG +RK+DLPCAFC C+ TWDLHS+FCLR GFGFHD
Sbjct: 241 KRKYCLFRGVFKNFRRTMVWRTIQDGKKRKMDLPCAFCACEFTWDLHSSFCLRPGFGFHD 300
Query: 934 DGEPVVRAYVCDNGHVSGAWTDVPMYT 1014
DGEP+VRAYVC+NGHVSGAWTD+P+YT
Sbjct: 301 DGEPMVRAYVCENGHVSGAWTDLPIYT 327
>ref|XP_002266159.1| PREDICTED: phytochrome A-associated F-box protein-like [Vitis
vinifera]
Length = 330
Score = 330 bits (847), Expect = 4e-88
Identities = 173/329 (52%), Positives = 207/329 (62%), Gaps = 30/329 (9%)
Frame = +1
Query: 118 LFSELTDDIVLKILWKVEDDPRDWGRLSCVSTRFRSLIRDFCWKNKCALTIPS---ELLS 288
+FS+L+DD+VL IL+K+EDDPR W RL+CV T+F SLIR+ CWK KC+ TIPS +L S
Sbjct: 8 VFSKLSDDVVLSILFKLEDDPRYWARLACVCTKFSSLIRNVCWKTKCSQTIPSIVADLFS 67
Query: 289 ASDPFS-------LHKLSFCCPGPLHAGLLFDS-----------DEEQH----YPLTTXX 402
S LHKLS CCPG LH+G+L ++ DE+ + +T
Sbjct: 68 GPGDSSPPGGWAALHKLSVCCPGLLHSGVLLENSDFGLERELGPDEDYRKAGSFQITVGD 127
Query: 403 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--TLYAATESQQQEQVQPPHSPENEIRHG 576
TLY +E+ + Q+ E+ +G
Sbjct: 128 ATTPAVASSSHHDGNSEVSDSCSWSLFDDLYFDTLYNVSETMDETQIGV------EVENG 181
Query: 577 VVVAPC---ASKRRKVCGSWSSHLASGKWNLSREQGSKLLARQFRDDCLYVCDWPGCVHS 747
V SK K C SHLASG WNLSREQG+KLLA +FR DCLY+CDWPGCVH
Sbjct: 182 AVKVGGDLPVSKTVKSCRPLRSHLASGVWNLSREQGNKLLASRFRGDCLYICDWPGCVHV 241
Query: 748 EEKREYRLFRGVFKNFKRTRVWRTVNDGNRRKLDLPCAFCNCKHTWDLHSAFCLRRGFGF 927
EEKR Y LFRGVFKNFKR+RVWRT+NDGNR K+DL CAFC CK TWDLHSAFCLRRGFG+
Sbjct: 242 EEKRNYMLFRGVFKNFKRSRVWRTINDGNRSKVDLNCAFCPCKETWDLHSAFCLRRGFGY 301
Query: 928 HDDGEPVVRAYVCDNGHVSGAWTDVPMYT 1014
HDDGEPVVRAYVC+NGHVSGAWT+ P+YT
Sbjct: 302 HDDGEPVVRAYVCENGHVSGAWTEYPLYT 330
>ref|XP_002302709.1| predicted protein [Populus trichocarpa] gi|222844435|gb|EEE81982.1|
predicted protein [Populus trichocarpa]
Length = 331
Score = 330 bits (847), Expect = 4e-88
Identities = 167/325 (51%), Positives = 207/325 (63%), Gaps = 27/325 (8%)
Frame = +1
Query: 121 FSELTDDIVLKILWKVEDDPRDWGRLSCVSTRFRSLIRDFCWKNKCALTIPS---ELLSA 291
FS+L+DD+VL I K+EDDPR+W RL+CV T+F SLIRD CWK+KC TIPS +LLS+
Sbjct: 7 FSKLSDDVVLNIFSKLEDDPRNWARLACVCTKFSSLIRDICWKSKCNKTIPSVVSDLLSS 66
Query: 292 SD-PF-----SLHKLSFCCPGPLHAGLLFDSDE---------EQHYPLTTXXXXXXXXXX 426
D PF +LHKL+ CCPG LHAG+ + + + ++ +
Sbjct: 67 PDSPFPGAWSALHKLAVCCPGLLHAGVFLEHSDFGLERELGPDDYFHKSKNTPSQQPQQA 126
Query: 427 XXXXXXXXXXXXXXXXXXXXXXXTLYAATESQQQEQVQPPHSPE----NEIRHGVVVAPC 594
T+Y ESQ V E N+ + +
Sbjct: 127 SHSGSNLDKRDSSWSLFDDLYYDTVYNVYESQDAATVSCEAKEEVIGGNDDKSVDIFVKA 186
Query: 595 -----ASKRRKVCGSWSSHLASGKWNLSREQGSKLLARQFRDDCLYVCDWPGCVHSEEKR 759
KRRK+C S SSHLASG WNLSREQG+KLLA +FR DCLY+CDWPGC H EKR
Sbjct: 187 RGISSVGKRRKICRSLSSHLASGVWNLSREQGNKLLASRFRGDCLYICDWPGCAHITEKR 246
Query: 760 EYRLFRGVFKNFKRTRVWRTVNDGNRRKLDLPCAFCNCKHTWDLHSAFCLRRGFGFHDDG 939
Y LFRG+FKNFK++RVWRT++DG+R K+DL CAFC C+ TWDL+SAFCL+RGFG+HDDG
Sbjct: 247 SYMLFRGIFKNFKKSRVWRTIHDGDRSKIDLSCAFCGCQETWDLNSAFCLKRGFGYHDDG 306
Query: 940 EPVVRAYVCDNGHVSGAWTDVPMYT 1014
EPVVRAYVC+NGHVSGAWTD P+YT
Sbjct: 307 EPVVRAYVCENGHVSGAWTDWPLYT 331