BLASTX nr result

ID: Glycyrrhiza23_contig00015970 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00015970
         (487 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003610657.1| TIR-NBS-LRR type disease resistance protein ...   202   3e-50
ref|XP_003623322.1| TIR-NBS-LRR type disease resistance protein ...   185   4e-45
ref|XP_003596687.1| Disease-resistance protein [Medicago truncat...   184   8e-45
ref|XP_003596679.1| TIR-NBS-LRR type disease resistance protein ...   157   6e-37
ref|XP_002276182.2| PREDICTED: TMV resistance protein N-like [Vi...   120   1e-25

>ref|XP_003610657.1| TIR-NBS-LRR type disease resistance protein [Medicago truncatula]
            gi|355511992|gb|AES93615.1| TIR-NBS-LRR type disease
            resistance protein [Medicago truncatula]
          Length = 1128

 Score =  202 bits (513), Expect = 3e-50
 Identities = 101/154 (65%), Positives = 120/154 (77%), Gaps = 1/154 (0%)
 Frame = -3

Query: 464  FLSNSLCYFSWNGYPFISFP-RVQLRPLVELNMPNSNIEQLWTGLQRLPNLKRMDMSNSK 288
            FLSNSLCY SWNG+PF S P  +QL  LVELNMP+SNI+QLW G+QRLP LKRMD+SNSK
Sbjct: 561  FLSNSLCYLSWNGFPFDSLPSNIQLHDLVELNMPDSNIKQLWEGIQRLPCLKRMDLSNSK 620

Query: 287  NLKMTPRFDWVQNLERLDFTGCINLVEVHPSIGFLKSLQFLSLQNCXXXXXXXXXXXSAT 108
            NL+ TP F+ +QNLER+DFTGCINL++VHPS+G L  L FLSLQNC           S +
Sbjct: 621  NLRTTPSFEGIQNLERIDFTGCINLLQVHPSVGLLTELVFLSLQNC--TNLTCLDFGSVS 678

Query: 107  LLYSLRVLRLSGCTTLENTPDFTRASYIEYLDMD 6
             ++SLRVLRLSGC  L NTPDFT A+ +EYLDM+
Sbjct: 679  RVWSLRVLRLSGCIGLRNTPDFTVAANLEYLDME 712


>ref|XP_003623322.1| TIR-NBS-LRR type disease resistance protein [Medicago truncatula]
            gi|355498337|gb|AES79540.1| TIR-NBS-LRR type disease
            resistance protein [Medicago truncatula]
          Length = 1204

 Score =  185 bits (469), Expect = 4e-45
 Identities = 100/160 (62%), Positives = 113/160 (70%), Gaps = 1/160 (0%)
 Frame = -3

Query: 482  FSVMHKFLSNSLCYFSWNGYPFISFP-RVQLRPLVELNMPNSNIEQLWTGLQRLPNLKRM 306
            FS    FLSNSL Y  WN YPFIS P   Q   LVELN+P S++EQLWT +Q++P LKRM
Sbjct: 546  FSGRPSFLSNSLRYLLWNDYPFISLPSNFQPYHLVELNLPGSSVEQLWTDIQQMPYLKRM 605

Query: 305  DMSNSKNLKMTPRFDWVQNLERLDFTGCINLVEVHPSIGFLKSLQFLSLQNCXXXXXXXX 126
            D+SNSKNLKMTP F  +QNLERLDF GCI+L  VHPSIG L+ LQFLSLQNC        
Sbjct: 606  DLSNSKNLKMTPCFKGMQNLERLDFAGCISLWHVHPSIGLLRELQFLSLQNCTSLVCFEF 665

Query: 125  XXXSATLLYSLRVLRLSGCTTLENTPDFTRASYIEYLDMD 6
               S +   SLRVL LSGCT LENTPDF +   +EYLDMD
Sbjct: 666  GRVSES--SSLRVLCLSGCTKLENTPDFEKLLNLEYLDMD 703


>ref|XP_003596687.1| Disease-resistance protein [Medicago truncatula]
            gi|355485735|gb|AES66938.1| Disease-resistance protein
            [Medicago truncatula]
          Length = 1288

 Score =  184 bits (466), Expect = 8e-45
 Identities = 100/162 (61%), Positives = 112/162 (69%), Gaps = 2/162 (1%)
 Frame = -3

Query: 482  FSVMHKFLSNSLCYFSWNGYPFISFPRVQLRP--LVELNMPNSNIEQLWTGLQRLPNLKR 309
            FS    FLSN+L Y  W+GYPF S P     P  LVELNMP+SNI++LW G + LP LKR
Sbjct: 666  FSGNLNFLSNNLRYLLWHGYPFTSLPS-NFEPYYLVELNMPHSNIQRLWEGRKDLPYLKR 724

Query: 308  MDMSNSKNLKMTPRFDWVQNLERLDFTGCINLVEVHPSIGFLKSLQFLSLQNCXXXXXXX 129
            MD+SNSK L  TP+F W   LERLDFTGC NL++VHPSIG L  L FLSLQNC       
Sbjct: 725  MDLSNSKFLTETPKFFWTPILERLDFTGCTNLIQVHPSIGHLTELVFLSLQNC--SSLVN 782

Query: 128  XXXXSATLLYSLRVLRLSGCTTLENTPDFTRASYIEYLDMDG 3
                  + LYSLRVLRLSGCT LE TPDFT AS +EYLDMDG
Sbjct: 783  LDFGIVSNLYSLRVLRLSGCTKLEKTPDFTGASNLEYLDMDG 824



 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 43/118 (36%), Positives = 59/118 (50%), Gaps = 2/118 (1%)
 Frame = -3

Query: 395  LRPLVELNMPN-SNIEQLWTGL-QRLPNLKRMDMSNSKNLKMTPRFDWVQNLERLDFTGC 222
            L  LV L++ N S++  L  G+   L +L+ + +S    L+ TP F    NLE LD  GC
Sbjct: 766  LTELVFLSLQNCSSLVNLDFGIVSNLYSLRVLRLSGCTKLEKTPDFTGASNLEYLDMDGC 825

Query: 221  INLVEVHPSIGFLKSLQFLSLQNCXXXXXXXXXXXSATLLYSLRVLRLSGCTTLENTP 48
             +L  VH SIG +  L+FLSL++C           + T   SL  L L GC  L   P
Sbjct: 826  TSLSTVHESIGAIAKLRFLSLRDCIILAGIPNSINTIT---SLVTLDLRGCLKLTTLP 880


>ref|XP_003596679.1| TIR-NBS-LRR type disease resistance protein [Medicago truncatula]
            gi|355485727|gb|AES66930.1| TIR-NBS-LRR type disease
            resistance protein [Medicago truncatula]
          Length = 1406

 Score =  157 bits (398), Expect = 6e-37
 Identities = 89/161 (55%), Positives = 103/161 (63%), Gaps = 2/161 (1%)
 Frame = -3

Query: 482  FSVMHKFLSNSLCYFSWNGYPFISFPRVQLRPL--VELNMPNSNIEQLWTGLQRLPNLKR 309
            FS    FLSNSL Y  W GYPF S P +   PL  VELNMP S I++LW G + LP LKR
Sbjct: 821  FSGSLNFLSNSLQYLLWYGYPFASLP-LNFEPLRLVELNMPCSLIKRLWDGHKNLPCLKR 879

Query: 308  MDMSNSKNLKMTPRFDWVQNLERLDFTGCINLVEVHPSIGFLKSLQFLSLQNCXXXXXXX 129
            +D+SNS+ L  TP F   Q +ERLDFTGCINL  VHPSIG LK L FLSL+ C       
Sbjct: 880  VDLSNSRCLVETPNFTGSQIIERLDFTGCINLSYVHPSIGLLKELAFLSLEGCRNLVSLV 939

Query: 128  XXXXSATLLYSLRVLRLSGCTTLENTPDFTRASYIEYLDMD 6
                 A+ LYSL+VL LSGC+ LE   DF   S +EYLD+D
Sbjct: 940  LDGHPASNLYSLKVLHLSGCSKLEIVSDFRGVSNLEYLDID 980


>ref|XP_002276182.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1003

 Score =  120 bits (301), Expect = 1e-25
 Identities = 72/163 (44%), Positives = 94/163 (57%), Gaps = 2/163 (1%)
 Frame = -3

Query: 485  KFSVMHKFLSNSLCYFSWNGYPFISFPR-VQLRPLVELNMPNSNIEQLWTGLQRLPNLKR 309
            +F+   KF SN L Y  W+GY   S P+    + LVEL+MP S+I++LW G++ L  LK 
Sbjct: 579  RFAHEFKFCSNDLRYLYWHGYSLKSLPKDFSPKHLVELSMPYSHIKKLWKGIKVLERLKS 638

Query: 308  MDMSNSKNLKMTPRFDWVQNLERLDFTGCINLVEVHPSIGFLKSLQFLSLQNCXXXXXXX 129
            +D+S+SK L  TP F  + NLERL   GCINL +VHPS+G LK L FLSL+NC       
Sbjct: 639  IDLSHSKYLIQTPDFSGITNLERLVLEGCINLPKVHPSLGVLKKLNFLSLKNC---TMLR 695

Query: 128  XXXXSATLLYSLRVLRLSGCTTLENTPD-FTRASYIEYLDMDG 3
                S   L SL    LSGC+  E  P+ F     ++ L  DG
Sbjct: 696  RLPSSTCSLKSLETFILSGCSKFEEFPENFGNLEMLKELHADG 738


Top