BLASTX nr result

ID: Glycyrrhiza23_contig00015956 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00015956
         (498 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003552628.1| PREDICTED: pentatricopeptide repeat-containi...   293   1e-77
ref|XP_003530467.1| PREDICTED: pentatricopeptide repeat-containi...   284   5e-75
ref|XP_002278999.1| PREDICTED: pentatricopeptide repeat-containi...   223   2e-56
emb|CAN63553.1| hypothetical protein VITISV_003195 [Vitis vinifera]   221   6e-56
ref|XP_002329308.1| predicted protein [Populus trichocarpa] gi|2...   207   9e-52

>ref|XP_003552628.1| PREDICTED: pentatricopeptide repeat-containing protein At3g02490,
           mitochondrial-like [Glycine max]
          Length = 629

 Score =  293 bits (749), Expect = 1e-77
 Identities = 140/163 (85%), Positives = 154/163 (94%)
 Frame = +2

Query: 2   VESAGYTFDLLMNSYCQMNRAIDGCKILCRLVNEKELKPRHSTYKLLVTKLLVQGGFADA 181
           V SAGY+F++LMNSYCQMNRA+D  KILCRLVNEK+LKP HSTYKLLVTKLLVQGGF DA
Sbjct: 467 VASAGYSFNVLMNSYCQMNRAVDASKILCRLVNEKQLKPWHSTYKLLVTKLLVQGGFTDA 526

Query: 182 LNILGLMRTHGFPPFTDPFVEHISKRGSGDDAVMFLKAMTSKRFPSTSVYLRMFEAFFEH 361
           LNILGLMRTHGFPPFTDPF+EH+SK GSGDDAV+FLKAMTSKRFPSTS++LRMFEAFF+H
Sbjct: 527 LNILGLMRTHGFPPFTDPFIEHLSKSGSGDDAVLFLKAMTSKRFPSTSMFLRMFEAFFKH 586

Query: 362 GRHEEAQNFLSKCPGYIRNHADVLSLFCSMNSKEAASSGVLAA 490
            RHEEAQNFLSKCP YIRNHADVL+LFCS+NSKEAASS +LAA
Sbjct: 587 RRHEEAQNFLSKCPRYIRNHADVLNLFCSLNSKEAASSSMLAA 629


>ref|XP_003530467.1| PREDICTED: pentatricopeptide repeat-containing protein At3g02490,
           mitochondrial-like [Glycine max]
          Length = 628

 Score =  284 bits (727), Expect = 5e-75
 Identities = 138/163 (84%), Positives = 152/163 (93%)
 Frame = +2

Query: 2   VESAGYTFDLLMNSYCQMNRAIDGCKILCRLVNEKELKPRHSTYKLLVTKLLVQGGFADA 181
           V SAGY+FD+LMNSYCQMNRA+D  KILCRLVNEK+LKP HSTYKLLVTKLLVQGGF DA
Sbjct: 466 VASAGYSFDVLMNSYCQMNRAVDASKILCRLVNEKKLKPWHSTYKLLVTKLLVQGGFTDA 525

Query: 182 LNILGLMRTHGFPPFTDPFVEHISKRGSGDDAVMFLKAMTSKRFPSTSVYLRMFEAFFEH 361
           LNILGLMRT GFPPFTDPF+EH+SK GSG+ A +FLKAMTSKRFPSTS++L MFEAFF++
Sbjct: 526 LNILGLMRTLGFPPFTDPFIEHLSKSGSGNAAALFLKAMTSKRFPSTSMFLCMFEAFFKN 585

Query: 362 GRHEEAQNFLSKCPGYIRNHADVLSLFCSMNSKEAASSGVLAA 490
           GRHEEAQNFLSKCP YIRNHADVL+LFCSMNSKEAASSG+LAA
Sbjct: 586 GRHEEAQNFLSKCPRYIRNHADVLNLFCSMNSKEAASSGMLAA 628


>ref|XP_002278999.1| PREDICTED: pentatricopeptide repeat-containing protein At3g02490,
           mitochondrial-like [Vitis vinifera]
          Length = 650

 Score =  223 bits (567), Expect = 2e-56
 Identities = 102/156 (65%), Positives = 130/156 (83%)
 Frame = +2

Query: 2   VESAGYTFDLLMNSYCQMNRAIDGCKILCRLVNEKELKPRHSTYKLLVTKLLVQGGFADA 181
           V  AGY F++L+N+YC   R++D C +LC L ++++ KP HSTYKLL++KLLVQGGF  A
Sbjct: 492 VSYAGYAFEVLVNAYCCKGRSVDACGLLCDLASKEKFKPWHSTYKLLISKLLVQGGFQAA 551

Query: 182 LNILGLMRTHGFPPFTDPFVEHISKRGSGDDAVMFLKAMTSKRFPSTSVYLRMFEAFFEH 361
           LN+LGLM+ H FPPF DPF+E++S+ G+GDDA+ FL+AMT KRFPSTSV+L+ FEAFF+ 
Sbjct: 552 LNLLGLMKDHEFPPFLDPFIEYVSRTGTGDDAITFLRAMTVKRFPSTSVFLQTFEAFFKA 611

Query: 362 GRHEEAQNFLSKCPGYIRNHADVLSLFCSMNSKEAA 469
           GRH EAQ+FLSKCPGYIRNHADVL+LF +M S EAA
Sbjct: 612 GRHNEAQDFLSKCPGYIRNHADVLNLFYTMKSGEAA 647


>emb|CAN63553.1| hypothetical protein VITISV_003195 [Vitis vinifera]
          Length = 650

 Score =  221 bits (562), Expect = 6e-56
 Identities = 101/156 (64%), Positives = 129/156 (82%)
 Frame = +2

Query: 2   VESAGYTFDLLMNSYCQMNRAIDGCKILCRLVNEKELKPRHSTYKLLVTKLLVQGGFADA 181
           V   GY F++L+N+YC   R++D C +LC L ++++ KP HSTYKLL++KLLVQGGF  A
Sbjct: 492 VSYXGYAFEVLVNAYCCKGRSVDACGLLCDLASKEKFKPWHSTYKLLISKLLVQGGFQAA 551

Query: 182 LNILGLMRTHGFPPFTDPFVEHISKRGSGDDAVMFLKAMTSKRFPSTSVYLRMFEAFFEH 361
           LN+LGLM+ H FPPF DPF+E++S+ G+GDDA+ FL+AMT KRFPSTSV+L+ FEAFF+ 
Sbjct: 552 LNLLGLMKDHEFPPFLDPFIEYVSRTGTGDDAITFLRAMTVKRFPSTSVFLQTFEAFFKA 611

Query: 362 GRHEEAQNFLSKCPGYIRNHADVLSLFCSMNSKEAA 469
           GRH EAQ+FLSKCPGYIRNHADVL+LF +M S EAA
Sbjct: 612 GRHNEAQDFLSKCPGYIRNHADVLNLFYTMKSGEAA 647


>ref|XP_002329308.1| predicted protein [Populus trichocarpa] gi|222870762|gb|EEF07893.1|
           predicted protein [Populus trichocarpa]
          Length = 658

 Score =  207 bits (526), Expect = 9e-52
 Identities = 98/161 (60%), Positives = 126/161 (78%), Gaps = 1/161 (0%)
 Frame = +2

Query: 2   VESAGYTFDLLMNSYCQMNRAIDGCKILCRLVNEKELKPRHSTYKLLVTKLLVQGGFADA 181
           V  AGY  +LL+N+YC  NRA D C +LC  V + +L P  +TYK+L++KLL QGGF DA
Sbjct: 496 VTGAGYAVELLVNAYCLKNRAGDACNLLCDYVCQNQLHPWRTTYKVLISKLLAQGGFKDA 555

Query: 182 LNILGLMRTHGFPPFTDPFVEHISKRGSGDDAVMFLKAMTSKRFPSTSVYLRMFEAFFEH 361
           LN+LGLM++HG PP+ DPF E +SK G+GDDA+ F+ AMT+K+FPS SV LR+FEAFF  
Sbjct: 556 LNLLGLMQSHGIPPYIDPFFEFVSKSGTGDDAIAFMNAMTTKKFPSISVSLRLFEAFFNA 615

Query: 362 GRHEEAQNFLSKCPGYIRNHADVLSLFCSM-NSKEAASSGV 481
            RH EAQ+FLSKCP +IRNHADVL+LFCSM +SK+ A++ V
Sbjct: 616 KRHSEAQDFLSKCPVFIRNHADVLTLFCSMKSSKDTAAATV 656


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