BLASTX nr result

ID: Glycyrrhiza23_contig00015942 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00015942
         (441 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003594564.1| Translocase of chloroplast [Medicago truncat...   187   8e-46
ref|XP_003538983.1| PREDICTED: translocase of chloroplast 132, c...   164   7e-39
ref|XP_003540651.1| PREDICTED: translocase of chloroplast 132, c...   159   2e-37
ref|XP_002277504.2| PREDICTED: translocase of chloroplast 120, c...   142   2e-32
emb|CBI37904.3| unnamed protein product [Vitis vinifera]              142   2e-32

>ref|XP_003594564.1| Translocase of chloroplast [Medicago truncatula]
            gi|355483612|gb|AES64815.1| Translocase of chloroplast
            [Medicago truncatula]
          Length = 1338

 Score =  187 bits (475), Expect = 8e-46
 Identities = 111/198 (56%), Positives = 122/198 (61%), Gaps = 52/198 (26%)
 Frame = +3

Query: 3    YRSEISNEDNHGNYENLSVVGKPEKTPQNNAKGKETTQITKEQNSELVSSSGKTVATSPP 182
            Y S+ISNE+N G+ E  SVV +PEK P+NN K K+TTQITKEQNSEL SSSGK+VATS P
Sbjct: 467  YLSQISNEENQGDNEKSSVVVEPEKIPENNVKEKQTTQITKEQNSELDSSSGKSVATSTP 526

Query: 183  LVRPAGL----------------------------------------------------G 206
            LVRP GL                                                    G
Sbjct: 527  LVRPVGLGPAAPLLEPAPRVAQQPRVNYTVFNTQSQRMEDSSSGEPEATSTPVVRPVGLG 586

Query: 207  HAALLLEPASRVVQHPWANCTVSNTQSMKMEDSSTGEAEEYDETREKLQMIRVKFLRLAH 386
             AA LLEPA RV Q P  N TVSNTQS +MED+S+GE EE DETREKLQMIRVKFLRLA+
Sbjct: 587  PAAPLLEPAPRVAQQPRVNYTVSNTQSQRMEDNSSGEPEENDETREKLQMIRVKFLRLAN 646

Query: 387  RLGQTPHNVVVAQVLYRL 440
            R GQTPHNVVVAQVLYRL
Sbjct: 647  RFGQTPHNVVVAQVLYRL 664


>ref|XP_003538983.1| PREDICTED: translocase of chloroplast 132, chloroplastic-like
            [Glycine max]
          Length = 1367

 Score =  164 bits (415), Expect = 7e-39
 Identities = 96/164 (58%), Positives = 116/164 (70%), Gaps = 19/164 (11%)
 Frame = +3

Query: 6    RSEISNEDNHGNYENLSVVGKPEKTPQNNAKGKETTQITKEQN----SELVSSSGKTVAT 173
            +S+I +E+ H +++N SVV +PE   +   +   TTQ+T EQ+    +++ SSS ++  T
Sbjct: 531  QSQIFDEE-HRDHDNTSVVEEPESIQEKIIQQTGTTQVTGEQHVQPAADISSSSKRSAGT 589

Query: 174  SPPLVRPA---------------GLGHAALLLEPASRVVQHPWANCTVSNTQSMKMEDSS 308
             P  VRP+               GLG AA LLEPASRVVQ P AN  VSNTQS +MEDSS
Sbjct: 590  VPTPVRPSSENSPAAGPTPVHPTGLGRAAPLLEPASRVVQQPRANGAVSNTQSQQMEDSS 649

Query: 309  TGEAEEYDETREKLQMIRVKFLRLAHRLGQTPHNVVVAQVLYRL 440
            +GEAEEYDETREKLQMIRVKFLRLAHRLGQTPHNVVVAQVLYRL
Sbjct: 650  SGEAEEYDETREKLQMIRVKFLRLAHRLGQTPHNVVVAQVLYRL 693


>ref|XP_003540651.1| PREDICTED: translocase of chloroplast 132, chloroplastic-like
           [Glycine max]
          Length = 1224

 Score =  159 bits (402), Expect = 2e-37
 Identities = 95/164 (57%), Positives = 116/164 (70%), Gaps = 19/164 (11%)
 Frame = +3

Query: 6   RSEISNEDNHGNYENLSVVGKPEKTPQNNAKGKETTQITKEQN----SELVSSSGKTVAT 173
           +S+IS+E+ H +++N SVV +PE   +      +  Q+T EQ+    +++ SSS ++  T
Sbjct: 394 QSQISDEE-HRDHDNTSVVEEPESIQE------KIIQVTGEQHVQPAADISSSSERSAGT 446

Query: 174 SPPLVRPA---------------GLGHAALLLEPASRVVQHPWANCTVSNTQSMKMEDSS 308
            P  VRP+               GLG AA LLEPASRVVQ P AN TVSN+QS +MEDSS
Sbjct: 447 VPTPVRPSSENSAAAGPTPVHPTGLGRAAPLLEPASRVVQQPRANGTVSNSQSQQMEDSS 506

Query: 309 TGEAEEYDETREKLQMIRVKFLRLAHRLGQTPHNVVVAQVLYRL 440
           +GEAEEYDETREKLQMIRVKFLRLAHRLGQTPHNVVVAQVLYRL
Sbjct: 507 SGEAEEYDETREKLQMIRVKFLRLAHRLGQTPHNVVVAQVLYRL 550


>ref|XP_002277504.2| PREDICTED: translocase of chloroplast 120, chloroplastic-like
           [Vitis vinifera]
          Length = 1318

 Score =  142 bits (359), Expect = 2e-32
 Identities = 82/144 (56%), Positives = 97/144 (67%), Gaps = 6/144 (4%)
 Frame = +3

Query: 27  DNHGNYENLSVVGKPEKTPQNNAKGKETTQITKEQNSEL------VSSSGKTVATSPPLV 188
           +N    +N  VV + ++T + N + KE  +I   +  E+       SSSG++    PP  
Sbjct: 504 ENVAEVKNKYVVFEEQETKEPNME-KEDQKIQGNREREIRPAEQVASSSGRSSNPGPPPA 562

Query: 189 RPAGLGHAALLLEPASRVVQHPWANCTVSNTQSMKMEDSSTGEAEEYDETREKLQMIRVK 368
            PAGLG AA LLEPASRVVQ P  N T S  Q+  +ED+  GEAEE DETREKLQMIRVK
Sbjct: 563 HPAGLGRAAPLLEPASRVVQQPRVNGTTSQVQAQLIEDAGNGEAEENDETREKLQMIRVK 622

Query: 369 FLRLAHRLGQTPHNVVVAQVLYRL 440
           FLRLAHRLGQTPHNVVVAQVLYRL
Sbjct: 623 FLRLAHRLGQTPHNVVVAQVLYRL 646


>emb|CBI37904.3| unnamed protein product [Vitis vinifera]
          Length = 853

 Score =  142 bits (359), Expect = 2e-32
 Identities = 82/144 (56%), Positives = 97/144 (67%), Gaps = 6/144 (4%)
 Frame = +3

Query: 27  DNHGNYENLSVVGKPEKTPQNNAKGKETTQITKEQNSEL------VSSSGKTVATSPPLV 188
           +N    +N  VV + ++T + N + KE  +I   +  E+       SSSG++    PP  
Sbjct: 68  ENVAEVKNKYVVFEEQETKEPNME-KEDQKIQGNREREIRPAEQVASSSGRSSNPGPPPA 126

Query: 189 RPAGLGHAALLLEPASRVVQHPWANCTVSNTQSMKMEDSSTGEAEEYDETREKLQMIRVK 368
            PAGLG AA LLEPASRVVQ P  N T S  Q+  +ED+  GEAEE DETREKLQMIRVK
Sbjct: 127 HPAGLGRAAPLLEPASRVVQQPRVNGTTSQVQAQLIEDAGNGEAEENDETREKLQMIRVK 186

Query: 369 FLRLAHRLGQTPHNVVVAQVLYRL 440
           FLRLAHRLGQTPHNVVVAQVLYRL
Sbjct: 187 FLRLAHRLGQTPHNVVVAQVLYRL 210


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