BLASTX nr result

ID: Glycyrrhiza23_contig00015941 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00015941
         (483 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003596882.1| Histone deacetylase [Medicago truncatula] gi...   293   1e-77
gb|ACJ84689.1| unknown [Medicago truncatula] gi|388519583|gb|AFK...   291   3e-77
ref|XP_003540263.1| PREDICTED: histone deacetylase 8-like isofor...   279   1e-73
ref|XP_002313479.1| histone deacetylase [Populus trichocarpa] gi...   270   9e-71
emb|CBI28344.3| unnamed protein product [Vitis vinifera]              266   1e-69

>ref|XP_003596882.1| Histone deacetylase [Medicago truncatula]
           gi|87240922|gb|ABD32780.1| Histone deacetylase
           superfamily [Medicago truncatula]
           gi|355485930|gb|AES67133.1| Histone deacetylase
           [Medicago truncatula]
          Length = 386

 Score =  293 bits (750), Expect = 1e-77
 Identities = 138/161 (85%), Positives = 146/161 (90%)
 Frame = +1

Query: 1   GTTLSSMKHLLDGNGKVAYALVRPPGHHAQPSQADGYCFLNNAGLAVQLALDSGCKKVAV 180
           GTTLSSMKHLLDG+GKVAYALVRPPGHHAQPSQADGYCFLNNAGLAVQLALDSGCKKVAV
Sbjct: 128 GTTLSSMKHLLDGHGKVAYALVRPPGHHAQPSQADGYCFLNNAGLAVQLALDSGCKKVAV 187

Query: 181 IDIDVHYGNGTAEGFYSSNKVLTISLHMNHGSWGPSHPQSGSVDXXXXXXXXXXXXXIPL 360
           IDIDVHYGNGTAEGFYSSNKVLT+SLHMNHGSWGPSHPQSGS+D             IPL
Sbjct: 188 IDIDVHYGNGTAEGFYSSNKVLTVSLHMNHGSWGPSHPQSGSIDELGDGEGYGYNLNIPL 247

Query: 361 PNGTGDNGYIYAFKELVVPSVHRFGPDMIVMVIGQDSSAFD 483
           PNGTGDNGY+YAF ELVVPS+H+F PDMIV+V+GQDSSAFD
Sbjct: 248 PNGTGDNGYVYAFNELVVPSIHKFEPDMIVLVVGQDSSAFD 288


>gb|ACJ84689.1| unknown [Medicago truncatula] gi|388519583|gb|AFK47853.1| unknown
           [Medicago truncatula]
          Length = 386

 Score =  291 bits (746), Expect = 3e-77
 Identities = 137/161 (85%), Positives = 146/161 (90%)
 Frame = +1

Query: 1   GTTLSSMKHLLDGNGKVAYALVRPPGHHAQPSQADGYCFLNNAGLAVQLALDSGCKKVAV 180
           GTTLSSMKHLLDG+GKVAYALVRPPGHHAQPSQADGYCFLNNAGLAVQLALDSGCKKVAV
Sbjct: 128 GTTLSSMKHLLDGHGKVAYALVRPPGHHAQPSQADGYCFLNNAGLAVQLALDSGCKKVAV 187

Query: 181 IDIDVHYGNGTAEGFYSSNKVLTISLHMNHGSWGPSHPQSGSVDXXXXXXXXXXXXXIPL 360
           IDIDVHYGNGTAEGFYSSN+VLT+SLHMNHGSWGPSHPQSGS+D             IPL
Sbjct: 188 IDIDVHYGNGTAEGFYSSNEVLTVSLHMNHGSWGPSHPQSGSIDELGDGEGYGYNLNIPL 247

Query: 361 PNGTGDNGYIYAFKELVVPSVHRFGPDMIVMVIGQDSSAFD 483
           PNGTGDNGY+YAF ELVVPS+H+F PDMIV+V+GQDSSAFD
Sbjct: 248 PNGTGDNGYVYAFNELVVPSIHKFEPDMIVLVVGQDSSAFD 288


>ref|XP_003540263.1| PREDICTED: histone deacetylase 8-like isoform 1 [Glycine max]
          Length = 381

 Score =  279 bits (714), Expect = 1e-73
 Identities = 132/161 (81%), Positives = 143/161 (88%)
 Frame = +1

Query: 1   GTTLSSMKHLLDGNGKVAYALVRPPGHHAQPSQADGYCFLNNAGLAVQLALDSGCKKVAV 180
           GTTLS+MKHLL+G+GKV+YALVRPPGHHAQPS ADGYCFLNNAGLAVQLALDSGCKKVAV
Sbjct: 128 GTTLSAMKHLLNGDGKVSYALVRPPGHHAQPSLADGYCFLNNAGLAVQLALDSGCKKVAV 187

Query: 181 IDIDVHYGNGTAEGFYSSNKVLTISLHMNHGSWGPSHPQSGSVDXXXXXXXXXXXXXIPL 360
           IDIDVHYGNGTAEGFY SNKVLTISLHMNHGSWGPSHPQSGSVD             IPL
Sbjct: 188 IDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQSGSVDELGEGEGYGFNLNIPL 247

Query: 361 PNGTGDNGYIYAFKELVVPSVHRFGPDMIVMVIGQDSSAFD 483
           PNGTGD GY++AF ELVVPS+ +FGPDMIV+V+GQDS+AFD
Sbjct: 248 PNGTGDKGYVHAFNELVVPSIQKFGPDMIVLVLGQDSNAFD 288


>ref|XP_002313479.1| histone deacetylase [Populus trichocarpa]
           gi|222849887|gb|EEE87434.1| histone deacetylase [Populus
           trichocarpa]
          Length = 379

 Score =  270 bits (690), Expect = 9e-71
 Identities = 127/161 (78%), Positives = 139/161 (86%)
 Frame = +1

Query: 1   GTTLSSMKHLLDGNGKVAYALVRPPGHHAQPSQADGYCFLNNAGLAVQLALDSGCKKVAV 180
           GTTLS+MKH+LDG+GK+AYALVRPPGHHAQP QADGYCFLNNAGLAVQLALDSGCKKV V
Sbjct: 121 GTTLSAMKHILDGHGKLAYALVRPPGHHAQPKQADGYCFLNNAGLAVQLALDSGCKKVTV 180

Query: 181 IDIDVHYGNGTAEGFYSSNKVLTISLHMNHGSWGPSHPQSGSVDXXXXXXXXXXXXXIPL 360
           IDIDVHYGNGTAEGFY ++KVLT+SLHMNHGSWGPSHPQ+GSV              IPL
Sbjct: 181 IDIDVHYGNGTAEGFYRTDKVLTVSLHMNHGSWGPSHPQNGSVGELGEGEGFGYNLNIPL 240

Query: 361 PNGTGDNGYIYAFKELVVPSVHRFGPDMIVMVIGQDSSAFD 483
           PNGTGD GY YA K+LVVP+VH+F PDMIV V+GQDSSAFD
Sbjct: 241 PNGTGDRGYGYAMKKLVVPAVHKFEPDMIVFVVGQDSSAFD 281


>emb|CBI28344.3| unnamed protein product [Vitis vinifera]
          Length = 348

 Score =  266 bits (680), Expect = 1e-69
 Identities = 124/161 (77%), Positives = 139/161 (86%)
 Frame = +1

Query: 1   GTTLSSMKHLLDGNGKVAYALVRPPGHHAQPSQADGYCFLNNAGLAVQLALDSGCKKVAV 180
           GT LS+MKH+LDG+GK+AYALVRPPGHHAQPSQADGYCFLNNAGLAVQLAL+SGC KVAV
Sbjct: 90  GTALSAMKHILDGHGKIAYALVRPPGHHAQPSQADGYCFLNNAGLAVQLALNSGCAKVAV 149

Query: 181 IDIDVHYGNGTAEGFYSSNKVLTISLHMNHGSWGPSHPQSGSVDXXXXXXXXXXXXXIPL 360
           IDIDVHYGNGTAEGFY S+KVLTISLHMNHGSWGPSHPQSGSVD             IPL
Sbjct: 150 IDIDVHYGNGTAEGFYHSDKVLTISLHMNHGSWGPSHPQSGSVDEIGVGEGFGYNLNIPL 209

Query: 361 PNGTGDNGYIYAFKELVVPSVHRFGPDMIVMVIGQDSSAFD 483
           PNGTGD GY YA  +LVVP++ ++ P+M+V+V+GQDSSAFD
Sbjct: 210 PNGTGDRGYAYAMNQLVVPAIQKYEPEMMVLVVGQDSSAFD 250


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