BLASTX nr result

ID: Glycyrrhiza23_contig00015912 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00015912
         (321 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_002149755.1| ribosomal protein S18 [Cicer arietinum] gi|1...    95   7e-18
sp|P49169.1|RR18_PEA RecName: Full=30S ribosomal protein S18, ch...    91   1e-16
ref|YP_003587572.1| ribosomal protein S18 [Pisum sativum] gi|293...    90   2e-16
ref|XP_003606053.1| 30S ribosomal protein S18 [Medicago truncatu...    89   5e-16
ref|XP_003605594.1| ATP synthase subunit a chloroplastic [Medica...    89   5e-16

>ref|YP_002149755.1| ribosomal protein S18 [Cicer arietinum] gi|197089822|gb|ACH41092.1|
           ribosomal protein S18 [Cicer arietinum]
          Length = 108

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 49/53 (92%), Positives = 50/53 (94%)
 Frame = -1

Query: 321 YKNMILLYRFISQQGKILSRRVNRLTLKQQRLITIAIKQARILSLLPFVNSSP 163
           YKNM LLYRFISQQGKILSRRVNRL+LKQQRLITIAIKQARILSLLPF NS P
Sbjct: 30  YKNMSLLYRFISQQGKILSRRVNRLSLKQQRLITIAIKQARILSLLPFANSLP 82


>sp|P49169.1|RR18_PEA RecName: Full=30S ribosomal protein S18, chloroplastic
           gi|1054830|emb|CAA57885.1| chloroplast ribosomal protein
           S18 [Pisum sativum]
          Length = 110

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 46/52 (88%), Positives = 51/52 (98%)
 Frame = -1

Query: 321 YKNMILLYRFISQQGKILSRRVNRLTLKQQRLITIAIKQARILSLLPFVNSS 166
           YKN+ LL++FIS+QGKILSRRVN+LTLKQQRLITIAIKQARILSLLPFVNSS
Sbjct: 30  YKNLSLLFKFISRQGKILSRRVNKLTLKQQRLITIAIKQARILSLLPFVNSS 81


>ref|YP_003587572.1| ribosomal protein S18 [Pisum sativum] gi|293338597|gb|ADE43570.1|
           ribosomal protein S18 (chloroplast) [Pisum sativum]
          Length = 110

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 45/52 (86%), Positives = 51/52 (98%)
 Frame = -1

Query: 321 YKNMILLYRFISQQGKILSRRVNRLTLKQQRLITIAIKQARILSLLPFVNSS 166
           YKN+ LL++FIS+QGKILSRRVN+LTLKQQRLITIAIKQARILSL+PFVNSS
Sbjct: 30  YKNLSLLFKFISRQGKILSRRVNKLTLKQQRLITIAIKQARILSLIPFVNSS 81


>ref|XP_003606053.1| 30S ribosomal protein S18 [Medicago truncatula]
           gi|355507108|gb|AES88250.1| 30S ribosomal protein S18
           [Medicago truncatula]
          Length = 209

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 46/50 (92%), Positives = 48/50 (96%)
 Frame = -1

Query: 321 YKNMILLYRFISQQGKILSRRVNRLTLKQQRLITIAIKQARILSLLPFVN 172
           YKNM LLYRFIS+QGKILSRRVNR TLKQQRLITIAIKQARILSLLPFV+
Sbjct: 115 YKNMSLLYRFISRQGKILSRRVNRSTLKQQRLITIAIKQARILSLLPFVS 164


>ref|XP_003605594.1| ATP synthase subunit a chloroplastic [Medicago truncatula]
           gi|355506649|gb|AES87791.1| ATP synthase subunit a
           chloroplastic [Medicago truncatula]
          Length = 467

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 46/50 (92%), Positives = 48/50 (96%)
 Frame = -1

Query: 321 YKNMILLYRFISQQGKILSRRVNRLTLKQQRLITIAIKQARILSLLPFVN 172
           YKNM LLYRFIS+QGKILSRRVNR TLKQQRLITIAIKQARILSLLPFV+
Sbjct: 406 YKNMSLLYRFISRQGKILSRRVNRSTLKQQRLITIAIKQARILSLLPFVS 455


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