BLASTX nr result
ID: Glycyrrhiza23_contig00015909
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Glycyrrhiza23_contig00015909 (379 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003532888.1| PREDICTED: ribosome biogenesis GTPase A-like... 177 6e-43 ref|XP_002318658.1| predicted protein [Populus trichocarpa] gi|2... 161 5e-38 ref|XP_002277185.1| PREDICTED: ribosome biogenesis GTPase A [Vit... 157 7e-37 ref|XP_004143028.1| PREDICTED: ribosome biogenesis GTPase A-like... 154 6e-36 ref|XP_002526350.1| GTP binding protein, putative [Ricinus commu... 151 5e-35 >ref|XP_003532888.1| PREDICTED: ribosome biogenesis GTPase A-like [Glycine max] Length = 399 Score = 177 bits (450), Expect = 6e-43 Identities = 87/128 (67%), Positives = 102/128 (79%), Gaps = 2/128 (1%) Frame = -1 Query: 379 RIPFVDLILHVTDARIPLSSQCHLLKNYSPSSNQIIALNKADLASSSALQEWMEYFRERN 200 RIP DL++ V DARIPLSS+C +L+NY PS QI+ALNK DL +S ++ WM YFRERN Sbjct: 63 RIPLADLVVQVRDARIPLSSECEILRNYPPSLKQIVALNKMDLVGTSNVKAWMGYFRERN 122 Query: 199 CISCGVNAHNKESIRQFLSLIQRHVGKLRRTDH--SNYTATTMLIGIPNVGKSALAKALH 26 CISCGVNAHNKE+I+Q LSLIQR V +L+ D +NYTAT ML+GIPNVGKSAL ALH Sbjct: 123 CISCGVNAHNKENIKQLLSLIQRRVSELKGADQCDNNYTATVMLVGIPNVGKSALVNALH 182 Query: 25 HVGRISAA 2 VGRISAA Sbjct: 183 QVGRISAA 190 >ref|XP_002318658.1| predicted protein [Populus trichocarpa] gi|222859331|gb|EEE96878.1| predicted protein [Populus trichocarpa] Length = 338 Score = 161 bits (408), Expect = 5e-38 Identities = 78/127 (61%), Positives = 98/127 (77%), Gaps = 1/127 (0%) Frame = -1 Query: 379 RIPFVDLILHVTDARIPLSSQCHLLKNYSPSS-NQIIALNKADLASSSALQEWMEYFRER 203 RIP D IL V DARIPLSS C LL N+ PSS +II +NK DLA+ S L+EW +YF ++ Sbjct: 39 RIPLADFILEVRDARIPLSSHCQLLSNFPPSSLRRIIVMNKTDLANRSQLKEWTKYFEQQ 98 Query: 202 NCISCGVNAHNKESIRQFLSLIQRHVGKLRRTDHSNYTATTMLIGIPNVGKSALAKALHH 23 NCIS GVN+HNKE +++FL+ +Q V +L+R DHS +T T M+IGIPNVGKSALA +LH Sbjct: 99 NCISYGVNSHNKEDVKKFLNFLQAQVRELKRIDHSGHTTTMMIIGIPNVGKSALANSLHQ 158 Query: 22 VGRISAA 2 +GRISAA Sbjct: 159 LGRISAA 165 >ref|XP_002277185.1| PREDICTED: ribosome biogenesis GTPase A [Vitis vinifera] gi|297744953|emb|CBI38545.3| unnamed protein product [Vitis vinifera] Length = 369 Score = 157 bits (398), Expect = 7e-37 Identities = 75/126 (59%), Positives = 98/126 (77%) Frame = -1 Query: 379 RIPFVDLILHVTDARIPLSSQCHLLKNYSPSSNQIIALNKADLASSSALQEWMEYFRERN 200 RIP VDL+L V DARIPLSS+ L+N+ SS +II LNK DLA+ ++EWM YF ++N Sbjct: 36 RIPLVDLVLEVRDARIPLSSEYDQLRNFPSSSKRIIVLNKMDLANRLEIKEWMRYFEQQN 95 Query: 199 CISCGVNAHNKESIRQFLSLIQRHVGKLRRTDHSNYTATTMLIGIPNVGKSALAKALHHV 20 CIS GVN+HNK++I++ L +Q V +++ DHS+YTAT ML+GIPNVGKSALA +LH + Sbjct: 96 CISFGVNSHNKDNIKECLKFLQAQVKGVKKIDHSSYTATIMLVGIPNVGKSALANSLHQI 155 Query: 19 GRISAA 2 GRISAA Sbjct: 156 GRISAA 161 >ref|XP_004143028.1| PREDICTED: ribosome biogenesis GTPase A-like [Cucumis sativus] gi|449482814|ref|XP_004156412.1| PREDICTED: ribosome biogenesis GTPase A-like [Cucumis sativus] Length = 366 Score = 154 bits (390), Expect = 6e-36 Identities = 72/126 (57%), Positives = 95/126 (75%) Frame = -1 Query: 379 RIPFVDLILHVTDARIPLSSQCHLLKNYSPSSNQIIALNKADLASSSALQEWMEYFRERN 200 RIP VD +L V DARIP SS+ ++KN+ PSS +II LNK DLA S + W +F + N Sbjct: 42 RIPLVDFVLEVRDARIPTSSEYEMMKNHPPSSKRIIVLNKTDLADQSQTEVWTRHFEDHN 101 Query: 199 CISCGVNAHNKESIRQFLSLIQRHVGKLRRTDHSNYTATTMLIGIPNVGKSALAKALHHV 20 CIS GVN+HNKE+IR+FL+ +Q V +L+++ HS++ T ML+GIPNVGKSALA +LH + Sbjct: 102 CISYGVNSHNKENIREFLNFLQARVRELKKSGHSSHATTMMLVGIPNVGKSALANSLHQI 161 Query: 19 GRISAA 2 GRISAA Sbjct: 162 GRISAA 167 >ref|XP_002526350.1| GTP binding protein, putative [Ricinus communis] gi|223534309|gb|EEF36021.1| GTP binding protein, putative [Ricinus communis] Length = 373 Score = 151 bits (382), Expect = 5e-35 Identities = 69/126 (54%), Positives = 97/126 (76%) Frame = -1 Query: 379 RIPFVDLILHVTDARIPLSSQCHLLKNYSPSSNQIIALNKADLASSSALQEWMEYFRERN 200 RI VD ++ V DARIPLSS+C LL N+S SS +II +NK DLA+ L++W++YF++R Sbjct: 36 RISLVDFVIEVRDARIPLSSECQLLTNHSDSSRRIIVMNKMDLANRLQLKDWIKYFKQRG 95 Query: 199 CISCGVNAHNKESIRQFLSLIQRHVGKLRRTDHSNYTATTMLIGIPNVGKSALAKALHHV 20 +S +N+HNK+++++FL+ +Q V L+ DHS T T M++GIPNVGKSALAK+LHH+ Sbjct: 96 FVSYAINSHNKDNVKEFLNFLQGQVRGLKNIDHSGCTITMMMVGIPNVGKSALAKSLHHI 155 Query: 19 GRISAA 2 GRISAA Sbjct: 156 GRISAA 161