BLASTX nr result

ID: Glycyrrhiza23_contig00015909 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00015909
         (379 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003532888.1| PREDICTED: ribosome biogenesis GTPase A-like...   177   6e-43
ref|XP_002318658.1| predicted protein [Populus trichocarpa] gi|2...   161   5e-38
ref|XP_002277185.1| PREDICTED: ribosome biogenesis GTPase A [Vit...   157   7e-37
ref|XP_004143028.1| PREDICTED: ribosome biogenesis GTPase A-like...   154   6e-36
ref|XP_002526350.1| GTP binding protein, putative [Ricinus commu...   151   5e-35

>ref|XP_003532888.1| PREDICTED: ribosome biogenesis GTPase A-like [Glycine max]
          Length = 399

 Score =  177 bits (450), Expect = 6e-43
 Identities = 87/128 (67%), Positives = 102/128 (79%), Gaps = 2/128 (1%)
 Frame = -1

Query: 379 RIPFVDLILHVTDARIPLSSQCHLLKNYSPSSNQIIALNKADLASSSALQEWMEYFRERN 200
           RIP  DL++ V DARIPLSS+C +L+NY PS  QI+ALNK DL  +S ++ WM YFRERN
Sbjct: 63  RIPLADLVVQVRDARIPLSSECEILRNYPPSLKQIVALNKMDLVGTSNVKAWMGYFRERN 122

Query: 199 CISCGVNAHNKESIRQFLSLIQRHVGKLRRTDH--SNYTATTMLIGIPNVGKSALAKALH 26
           CISCGVNAHNKE+I+Q LSLIQR V +L+  D   +NYTAT ML+GIPNVGKSAL  ALH
Sbjct: 123 CISCGVNAHNKENIKQLLSLIQRRVSELKGADQCDNNYTATVMLVGIPNVGKSALVNALH 182

Query: 25  HVGRISAA 2
            VGRISAA
Sbjct: 183 QVGRISAA 190


>ref|XP_002318658.1| predicted protein [Populus trichocarpa] gi|222859331|gb|EEE96878.1|
           predicted protein [Populus trichocarpa]
          Length = 338

 Score =  161 bits (408), Expect = 5e-38
 Identities = 78/127 (61%), Positives = 98/127 (77%), Gaps = 1/127 (0%)
 Frame = -1

Query: 379 RIPFVDLILHVTDARIPLSSQCHLLKNYSPSS-NQIIALNKADLASSSALQEWMEYFRER 203
           RIP  D IL V DARIPLSS C LL N+ PSS  +II +NK DLA+ S L+EW +YF ++
Sbjct: 39  RIPLADFILEVRDARIPLSSHCQLLSNFPPSSLRRIIVMNKTDLANRSQLKEWTKYFEQQ 98

Query: 202 NCISCGVNAHNKESIRQFLSLIQRHVGKLRRTDHSNYTATTMLIGIPNVGKSALAKALHH 23
           NCIS GVN+HNKE +++FL+ +Q  V +L+R DHS +T T M+IGIPNVGKSALA +LH 
Sbjct: 99  NCISYGVNSHNKEDVKKFLNFLQAQVRELKRIDHSGHTTTMMIIGIPNVGKSALANSLHQ 158

Query: 22  VGRISAA 2
           +GRISAA
Sbjct: 159 LGRISAA 165


>ref|XP_002277185.1| PREDICTED: ribosome biogenesis GTPase A [Vitis vinifera]
           gi|297744953|emb|CBI38545.3| unnamed protein product
           [Vitis vinifera]
          Length = 369

 Score =  157 bits (398), Expect = 7e-37
 Identities = 75/126 (59%), Positives = 98/126 (77%)
 Frame = -1

Query: 379 RIPFVDLILHVTDARIPLSSQCHLLKNYSPSSNQIIALNKADLASSSALQEWMEYFRERN 200
           RIP VDL+L V DARIPLSS+   L+N+  SS +II LNK DLA+   ++EWM YF ++N
Sbjct: 36  RIPLVDLVLEVRDARIPLSSEYDQLRNFPSSSKRIIVLNKMDLANRLEIKEWMRYFEQQN 95

Query: 199 CISCGVNAHNKESIRQFLSLIQRHVGKLRRTDHSNYTATTMLIGIPNVGKSALAKALHHV 20
           CIS GVN+HNK++I++ L  +Q  V  +++ DHS+YTAT ML+GIPNVGKSALA +LH +
Sbjct: 96  CISFGVNSHNKDNIKECLKFLQAQVKGVKKIDHSSYTATIMLVGIPNVGKSALANSLHQI 155

Query: 19  GRISAA 2
           GRISAA
Sbjct: 156 GRISAA 161


>ref|XP_004143028.1| PREDICTED: ribosome biogenesis GTPase A-like [Cucumis sativus]
           gi|449482814|ref|XP_004156412.1| PREDICTED: ribosome
           biogenesis GTPase A-like [Cucumis sativus]
          Length = 366

 Score =  154 bits (390), Expect = 6e-36
 Identities = 72/126 (57%), Positives = 95/126 (75%)
 Frame = -1

Query: 379 RIPFVDLILHVTDARIPLSSQCHLLKNYSPSSNQIIALNKADLASSSALQEWMEYFRERN 200
           RIP VD +L V DARIP SS+  ++KN+ PSS +II LNK DLA  S  + W  +F + N
Sbjct: 42  RIPLVDFVLEVRDARIPTSSEYEMMKNHPPSSKRIIVLNKTDLADQSQTEVWTRHFEDHN 101

Query: 199 CISCGVNAHNKESIRQFLSLIQRHVGKLRRTDHSNYTATTMLIGIPNVGKSALAKALHHV 20
           CIS GVN+HNKE+IR+FL+ +Q  V +L+++ HS++  T ML+GIPNVGKSALA +LH +
Sbjct: 102 CISYGVNSHNKENIREFLNFLQARVRELKKSGHSSHATTMMLVGIPNVGKSALANSLHQI 161

Query: 19  GRISAA 2
           GRISAA
Sbjct: 162 GRISAA 167


>ref|XP_002526350.1| GTP binding protein, putative [Ricinus communis]
           gi|223534309|gb|EEF36021.1| GTP binding protein,
           putative [Ricinus communis]
          Length = 373

 Score =  151 bits (382), Expect = 5e-35
 Identities = 69/126 (54%), Positives = 97/126 (76%)
 Frame = -1

Query: 379 RIPFVDLILHVTDARIPLSSQCHLLKNYSPSSNQIIALNKADLASSSALQEWMEYFRERN 200
           RI  VD ++ V DARIPLSS+C LL N+S SS +II +NK DLA+   L++W++YF++R 
Sbjct: 36  RISLVDFVIEVRDARIPLSSECQLLTNHSDSSRRIIVMNKMDLANRLQLKDWIKYFKQRG 95

Query: 199 CISCGVNAHNKESIRQFLSLIQRHVGKLRRTDHSNYTATTMLIGIPNVGKSALAKALHHV 20
            +S  +N+HNK+++++FL+ +Q  V  L+  DHS  T T M++GIPNVGKSALAK+LHH+
Sbjct: 96  FVSYAINSHNKDNVKEFLNFLQGQVRGLKNIDHSGCTITMMMVGIPNVGKSALAKSLHHI 155

Query: 19  GRISAA 2
           GRISAA
Sbjct: 156 GRISAA 161


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