BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00015847
         (942 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003621397.1| Pentatricopeptide repeat-containing protein ...    70   6e-10
ref|XP_003636545.1| Pentatricopeptide repeat-containing protein ...    63   9e-08
emb|CBI35204.3| unnamed protein product [Vitis vinifera]               56   4e-07
ref|XP_003548969.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...    59   2e-06
ref|XP_003533600.1| PREDICTED: pentatricopeptide repeat-containi...    59   2e-06

>ref|XP_003621397.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355496412|gb|AES77615.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 550

 Score = 70.5 bits (171), Expect = 6e-10
 Identities = 50/128 (39%), Positives = 68/128 (53%), Gaps = 14/128 (10%)
 Frame = +2

Query: 404 FSHYLAPFVFTPXXXXXXXXXXXYSFNRMLQMCSRPSILEFNKVLGSLAA-----FPPAI 568
           F HYL PF+  P            SF+RML+M   PSI+EFNK+LGS+       +  AI
Sbjct: 22  FCHYLHPFI--PKSNDFDVNNDVSSFHRMLRMRPTPSIVEFNKILGSIVKANNNHYTTAI 79

Query: 569 SLSQQMELIGIEQ-----NIVIGCYGQLCQMTFG-KVSVLMVKFRKY---CTYIILINGL 721
           SLS Q+EL GI       NI++ CY  L +MTF   +   ++K   +    T+  LING+
Sbjct: 80  SLSHQLELKGITPTIVTFNILVNCYCHLGEMTFAFSIFAKILKLGYHPTTITFNTLINGI 139

Query: 722 CKIGCIIE 745
           C  G + E
Sbjct: 140 CLNGKLKE 147


>ref|XP_003636545.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355502480|gb|AES83683.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 1280

 Score = 63.2 bits (152), Expect = 9e-08
 Identities = 49/120 (40%), Positives = 62/120 (51%), Gaps = 34/120 (28%)
 Frame = +2

Query: 476 SFNRMLQMCSRPSILEFNKVLGSLAA----FPPAISLSQQMELIGIEQ-----NIVIGCY 628
           SFNRM Q+   PSI+EFNK+L  L      +P  +SLS QME  G++      +I+I CY
Sbjct: 53  SFNRMRQIRQTPSIVEFNKILTYLIKTKNHYPTVLSLSTQMESKGVKPDLFTLSILINCY 112

Query: 629 GQLCQMTF----------------GKVS--------VLMVKFR-KYCTYIILINGLCKIG 733
             L QMTF                GKV+        VL + F   + TY ILINGLCK+G
Sbjct: 113 CHLGQMTFAFSVFAKILKMGLCLNGKVNEALLFHDHVLALGFHLNHVTYGILINGLCKMG 172


>emb|CBI35204.3| unnamed protein product [Vitis vinifera]
          Length = 543

 Score = 55.8 bits (133), Expect(2) = 4e-07
 Identities = 39/100 (39%), Positives = 51/100 (51%), Gaps = 14/100 (14%)
 Frame = +2

Query: 476 SFNRMLQMCSRPSILEFNKVLGSLAAF---PPAISLSQQMELIGIEQNI--VIGCYGQLC 640
           SFNRML+M   PS ++FNK+L S+A        +SLS QM+  GI  NI  +       C
Sbjct: 48  SFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFC 107

Query: 641 QMTFGKVSVLMVKFRK---------YCTYIILINGLCKIG 733
            +  GK+   +  F K           TY  LINGLCK+G
Sbjct: 108 HLNRGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVG 147



 Score = 25.0 bits (53), Expect(2) = 4e-07
 Identities = 9/13 (69%), Positives = 11/13 (84%)
 Frame = +1

Query: 736 YNRTIDSLCKDKE 774
           YN  IDSLCKD++
Sbjct: 171 YNTIIDSLCKDRQ 183


>ref|XP_003548969.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g12300, mitochondrial-like [Glycine max]
          Length = 422

 Score = 58.9 bits (141), Expect = 2e-06
 Identities = 42/95 (44%), Positives = 53/95 (55%), Gaps = 13/95 (13%)
 Frame = +2

Query: 479 FNRMLQMCSRPSILEFNKVLGS---LAAFPPAISLSQQMELIGIEQNIV-----IGCYGQ 634
           FNRML M   P I++FNK+LGS   +  +P AISLS+QME+ GIE N+V     I C+  
Sbjct: 42  FNRMLLMRHTPPIIKFNKILGSPVKMKYYPAAISLSKQMEVKGIEPNLVTLNILINCFCH 101

Query: 635 LCQMTF-----GKVSVLMVKFRKYCTYIILINGLC 724
           L  M F     GK+  L  +     T   LI GLC
Sbjct: 102 LGHMAFSFSVLGKILKLGYQ-PNTLTLTTLIKGLC 135


>ref|XP_003533600.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 694

 Score = 58.9 bits (141), Expect = 2e-06
 Identities = 46/98 (46%), Positives = 57/98 (58%), Gaps = 13/98 (13%)
 Frame = +2

Query: 479 FNRMLQMCSRPSILEFNKVLGSLAA---FPPAISLSQQMELIGIEQNIV-----IGCYGQ 634
           FN ML M + PSI+EF K+LGSL     FP AISLS+QME+ GIE ++V     I C+  
Sbjct: 120 FNGMLLMRNTPSIIEFGKILGSLVKMKHFPTAISLSKQMEVKGIEPDLVTLSILINCFCH 179

Query: 635 LCQMTFGKVSVL--MVKFRKYCTYII---LINGLCKIG 733
           L QM F   SVL  ++K       II   L+ GLC  G
Sbjct: 180 LGQMAF-SFSVLGKILKLGYQPNTIILTTLMKGLCLKG 216