BLASTX nr result

ID: Glycyrrhiza23_contig00015822 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00015822
         (510 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK38601.1| unknown [Lotus japonicus]                               63   2e-08
ref|XP_003543324.1| PREDICTED: nuclear cap-binding protein subun...    62   5e-08
emb|CBI21897.3| unnamed protein product [Vitis vinifera]               57   1e-06
ref|XP_002276868.1| PREDICTED: nuclear cap-binding protein subun...    57   1e-06
ref|XP_004137136.1| PREDICTED: nuclear cap-binding protein subun...    55   5e-06

>gb|AFK38601.1| unknown [Lotus japonicus]
          Length = 253

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 31/43 (72%), Positives = 31/43 (72%)
 Frame = +2

Query: 59  ESSKRTSDHESRRNSDHESRPEKNPRFRXXXXXXXXXXXXRKR 187
           ESSKRTSDHESRRNSDHESRPEKNPRFR            RKR
Sbjct: 209 ESSKRTSDHESRRNSDHESRPEKNPRFRESGDSDDEEEDDRKR 251


>ref|XP_003543324.1| PREDICTED: nuclear cap-binding protein subunit 2-like [Glycine max]
          Length = 258

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 30/43 (69%), Positives = 31/43 (72%)
 Frame = +2

Query: 59  ESSKRTSDHESRRNSDHESRPEKNPRFRXXXXXXXXXXXXRKR 187
           ESSKRTSDHESRRN+DHESRPEKNPRFR            RKR
Sbjct: 214 ESSKRTSDHESRRNTDHESRPEKNPRFRESGDSDEDEEDDRKR 256


>emb|CBI21897.3| unnamed protein product [Vitis vinifera]
          Length = 132

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 27/41 (65%), Positives = 29/41 (70%)
 Frame = +2

Query: 65  SKRTSDHESRRNSDHESRPEKNPRFRXXXXXXXXXXXXRKR 187
           SKRTSDH+SRRNSDH+SRPEKNPRFR            RKR
Sbjct: 90  SKRTSDHDSRRNSDHDSRPEKNPRFRESGDSDDEEEDDRKR 130


>ref|XP_002276868.1| PREDICTED: nuclear cap-binding protein subunit 2-like isoform 1
           [Vitis vinifera] gi|359485224|ref|XP_003633238.1|
           PREDICTED: nuclear cap-binding protein subunit 2-like
           isoform 2 [Vitis vinifera]
           gi|359485226|ref|XP_003633239.1| PREDICTED: nuclear
           cap-binding protein subunit 2-like isoform 3 [Vitis
           vinifera]
          Length = 253

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 27/41 (65%), Positives = 29/41 (70%)
 Frame = +2

Query: 65  SKRTSDHESRRNSDHESRPEKNPRFRXXXXXXXXXXXXRKR 187
           SKRTSDH+SRRNSDH+SRPEKNPRFR            RKR
Sbjct: 211 SKRTSDHDSRRNSDHDSRPEKNPRFRESGDSDDEEEDDRKR 251


>ref|XP_004137136.1| PREDICTED: nuclear cap-binding protein subunit 2-like [Cucumis
           sativus] gi|449476391|ref|XP_004154724.1| PREDICTED:
           nuclear cap-binding protein subunit 2-like [Cucumis
           sativus]
          Length = 251

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 25/28 (89%), Positives = 28/28 (100%)
 Frame = +2

Query: 59  ESSKRTSDHESRRNSDHESRPEKNPRFR 142
           ESSKRTSD+ESRRNS++ESRPEKNPRFR
Sbjct: 207 ESSKRTSDYESRRNSNYESRPEKNPRFR 234


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