BLASTX nr result

ID: Glycyrrhiza23_contig00015813 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00015813
         (374 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003548317.1| PREDICTED: probable cyclic nucleotide-gated ...   205   3e-51
ref|XP_003534112.1| PREDICTED: probable cyclic nucleotide-gated ...   205   3e-51
gb|AFK49438.1| unknown [Lotus japonicus]                              195   3e-48
ref|XP_003548315.1| PREDICTED: probable cyclic nucleotide-gated ...   189   2e-46
ref|XP_003549190.1| PREDICTED: probable cyclic nucleotide-gated ...   183   1e-44

>ref|XP_003548317.1| PREDICTED: probable cyclic nucleotide-gated ion channel 20,
           chloroplastic-like [Glycine max]
          Length = 766

 Score =  205 bits (522), Expect = 3e-51
 Identities = 100/106 (94%), Positives = 104/106 (98%)
 Frame = -2

Query: 373 CGEELLTWYLEHSSVSTDGRKVRLPGQRLVSNRTVRCLTNVEAFSLCAADLEEVTILFTR 194
           CGEELLTWYLEHSSVSTDGRKVRLPGQRLVSNRTVRCLTNVE+FSL A+D+EEVTILFTR
Sbjct: 661 CGEELLTWYLEHSSVSTDGRKVRLPGQRLVSNRTVRCLTNVESFSLSASDIEEVTILFTR 720

Query: 193 FLRSPCVQGALRYESPYWRSLAATRIQVAWRYRKKRLSRVNSSQSN 56
           FLRSPCVQGALRYESPYWRSLAATRIQVAWRYRKKRLSRVNSS S+
Sbjct: 721 FLRSPCVQGALRYESPYWRSLAATRIQVAWRYRKKRLSRVNSSPSD 766


>ref|XP_003534112.1| PREDICTED: probable cyclic nucleotide-gated ion channel 20,
           chloroplastic-like [Glycine max]
          Length = 766

 Score =  205 bits (522), Expect = 3e-51
 Identities = 100/106 (94%), Positives = 104/106 (98%)
 Frame = -2

Query: 373 CGEELLTWYLEHSSVSTDGRKVRLPGQRLVSNRTVRCLTNVEAFSLCAADLEEVTILFTR 194
           CGEELLTWYLEHSSVSTDGRKVRLPGQRLVSNRTVRCLTNVE+FSL A+D+EEVTILFTR
Sbjct: 661 CGEELLTWYLEHSSVSTDGRKVRLPGQRLVSNRTVRCLTNVESFSLSASDIEEVTILFTR 720

Query: 193 FLRSPCVQGALRYESPYWRSLAATRIQVAWRYRKKRLSRVNSSQSN 56
           FLRSPCVQGALRYESPYWRSLAATRIQVAWRYRKKRLSRVNSS S+
Sbjct: 721 FLRSPCVQGALRYESPYWRSLAATRIQVAWRYRKKRLSRVNSSPSD 766


>gb|AFK49438.1| unknown [Lotus japonicus]
          Length = 197

 Score =  195 bits (496), Expect = 3e-48
 Identities = 96/103 (93%), Positives = 100/103 (97%)
 Frame = -2

Query: 373 CGEELLTWYLEHSSVSTDGRKVRLPGQRLVSNRTVRCLTNVEAFSLCAADLEEVTILFTR 194
           CGEEL+TWYLEHSSVS+DGRKVRLPGQRLVSNRTV+CLTNVEAFSL AADLEEVTILFTR
Sbjct: 90  CGEELMTWYLEHSSVSSDGRKVRLPGQRLVSNRTVKCLTNVEAFSLSAADLEEVTILFTR 149

Query: 193 FLRSPCVQGALRYESPYWRSLAATRIQVAWRYRKKRLSRVNSS 65
           FLRSP VQGALRYESPYWRSLAA RIQVAWRYR+KRLSRVNSS
Sbjct: 150 FLRSPQVQGALRYESPYWRSLAANRIQVAWRYRQKRLSRVNSS 192


>ref|XP_003548315.1| PREDICTED: probable cyclic nucleotide-gated ion channel 20,
           chloroplastic-like [Glycine max]
          Length = 772

 Score =  189 bits (481), Expect = 2e-46
 Identities = 94/109 (86%), Positives = 102/109 (93%)
 Frame = -2

Query: 373 CGEELLTWYLEHSSVSTDGRKVRLPGQRLVSNRTVRCLTNVEAFSLCAADLEEVTILFTR 194
           CGEELLTWYLEHSSVSTDG+KVR+ GQRL+SNRTVRCLTNVEAFSL AADLEE+TILFTR
Sbjct: 662 CGEELLTWYLEHSSVSTDGKKVRVQGQRLLSNRTVRCLTNVEAFSLRAADLEELTILFTR 721

Query: 193 FLRSPCVQGALRYESPYWRSLAATRIQVAWRYRKKRLSRVNSSQSN*SL 47
           FLR+P VQGALRY SPYWRSLAA RIQVAWRYRKKRLSR N+SQS+ +L
Sbjct: 722 FLRNPHVQGALRYVSPYWRSLAANRIQVAWRYRKKRLSRANTSQSDQTL 770


>ref|XP_003549190.1| PREDICTED: probable cyclic nucleotide-gated ion channel 20,
           chloroplastic-like [Glycine max]
          Length = 747

 Score =  183 bits (465), Expect = 1e-44
 Identities = 92/103 (89%), Positives = 96/103 (93%)
 Frame = -2

Query: 373 CGEELLTWYLEHSSVSTDGRKVRLPGQRLVSNRTVRCLTNVEAFSLCAADLEEVTILFTR 194
           CGEELLTWYLEHSSVSTDGR+VRLPGQRL+SNRTVRCLTNVEA SL AA+LEEVTILFTR
Sbjct: 642 CGEELLTWYLEHSSVSTDGRRVRLPGQRLLSNRTVRCLTNVEALSLRAANLEEVTILFTR 701

Query: 193 FLRSPCVQGALRYESPYWRSLAATRIQVAWRYRKKRLSRVNSS 65
           FLRS  VQGALRYESPYWRSLAA RIQVAWRYRKKRLS  +SS
Sbjct: 702 FLRSLRVQGALRYESPYWRSLAAIRIQVAWRYRKKRLSHADSS 744


Top