BLASTX nr result
ID: Glycyrrhiza23_contig00015764
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Glycyrrhiza23_contig00015764 (560 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AFK46902.1| unknown [Medicago truncatula] 81 1e-13 ref|XP_003540235.1| PREDICTED: pentatricopeptide repeat-containi... 78 1e-12 ref|XP_003541975.1| PREDICTED: pentatricopeptide repeat-containi... 55 1e-05 >gb|AFK46902.1| unknown [Medicago truncatula] Length = 392 Score = 81.3 bits (199), Expect = 1e-13 Identities = 46/74 (62%), Positives = 57/74 (77%), Gaps = 10/74 (13%) Frame = +2 Query: 8 TANETSRSWLCITQASADDAVATVSNGVDTSGDS-------QRFAN---SLDSKVNENNT 157 T+NE+S+ WLCIT+ASADDA T SNGVDTSG++ Q+ A+ SLDS+V ENN+ Sbjct: 320 TSNESSKPWLCITRASADDAT-TASNGVDTSGNNHIHIDQPQKIADEVLSLDSQVIENNS 378 Query: 158 TSLTGKRKERSPPS 199 TS+TGKRKERS PS Sbjct: 379 TSVTGKRKERSDPS 392 >ref|XP_003540235.1| PREDICTED: pentatricopeptide repeat-containing protein At2g32230, mitochondrial-like [Glycine max] Length = 530 Score = 77.8 bits (190), Expect = 1e-12 Identities = 40/66 (60%), Positives = 48/66 (72%) Frame = +2 Query: 2 PGTANETSRSWLCITQASADDAVATVSNGVDTSGDSQRFANSLDSKVNENNTTSLTGKRK 181 PGT+ E++R WLCIT+ D VATVSNGV +SLDS+V+ENN TS+TGKRK Sbjct: 475 PGTSCESTRCWLCITRPCGHDVVATVSNGV----------SSLDSQVDENNATSVTGKRK 524 Query: 182 ERSPPS 199 ERSPPS Sbjct: 525 ERSPPS 530 >ref|XP_003541975.1| PREDICTED: pentatricopeptide repeat-containing protein At2g32230, mitochondrial-like [Glycine max] Length = 550 Score = 54.7 bits (130), Expect = 1e-05 Identities = 29/54 (53%), Positives = 38/54 (70%) Frame = +2 Query: 5 GTANETSRSWLCITQASADDAVATVSNGVDTSGDSQRFANSLDSKVNENNTTSL 166 GT+ E++R WLCIT+ S DAVATVSNGV +SLDS+V+EN+ TS+ Sbjct: 475 GTSCESTRCWLCITRPSGHDAVATVSNGV----------SSLDSQVDENSATSI 518