BLASTX nr result

ID: Glycyrrhiza23_contig00015764 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00015764
         (560 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK46902.1| unknown [Medicago truncatula]                           81   1e-13
ref|XP_003540235.1| PREDICTED: pentatricopeptide repeat-containi...    78   1e-12
ref|XP_003541975.1| PREDICTED: pentatricopeptide repeat-containi...    55   1e-05

>gb|AFK46902.1| unknown [Medicago truncatula]
          Length = 392

 Score = 81.3 bits (199), Expect = 1e-13
 Identities = 46/74 (62%), Positives = 57/74 (77%), Gaps = 10/74 (13%)
 Frame = +2

Query: 8   TANETSRSWLCITQASADDAVATVSNGVDTSGDS-------QRFAN---SLDSKVNENNT 157
           T+NE+S+ WLCIT+ASADDA  T SNGVDTSG++       Q+ A+   SLDS+V ENN+
Sbjct: 320 TSNESSKPWLCITRASADDAT-TASNGVDTSGNNHIHIDQPQKIADEVLSLDSQVIENNS 378

Query: 158 TSLTGKRKERSPPS 199
           TS+TGKRKERS PS
Sbjct: 379 TSVTGKRKERSDPS 392


>ref|XP_003540235.1| PREDICTED: pentatricopeptide repeat-containing protein At2g32230,
           mitochondrial-like [Glycine max]
          Length = 530

 Score = 77.8 bits (190), Expect = 1e-12
 Identities = 40/66 (60%), Positives = 48/66 (72%)
 Frame = +2

Query: 2   PGTANETSRSWLCITQASADDAVATVSNGVDTSGDSQRFANSLDSKVNENNTTSLTGKRK 181
           PGT+ E++R WLCIT+    D VATVSNGV          +SLDS+V+ENN TS+TGKRK
Sbjct: 475 PGTSCESTRCWLCITRPCGHDVVATVSNGV----------SSLDSQVDENNATSVTGKRK 524

Query: 182 ERSPPS 199
           ERSPPS
Sbjct: 525 ERSPPS 530


>ref|XP_003541975.1| PREDICTED: pentatricopeptide repeat-containing protein At2g32230,
           mitochondrial-like [Glycine max]
          Length = 550

 Score = 54.7 bits (130), Expect = 1e-05
 Identities = 29/54 (53%), Positives = 38/54 (70%)
 Frame = +2

Query: 5   GTANETSRSWLCITQASADDAVATVSNGVDTSGDSQRFANSLDSKVNENNTTSL 166
           GT+ E++R WLCIT+ S  DAVATVSNGV          +SLDS+V+EN+ TS+
Sbjct: 475 GTSCESTRCWLCITRPSGHDAVATVSNGV----------SSLDSQVDENSATSI 518


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