BLASTX nr result

ID: Glycyrrhiza23_contig00015748 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00015748
         (1239 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003627850.1| Protein DCL [Medicago truncatula] gi|3555218...   294   3e-77
ref|XP_003627838.1| DNA-directed RNA polymerase subunit [Medicag...   294   3e-77
ref|XP_003545837.1| PREDICTED: DNA-directed RNA polymerase E sub...   291   2e-76
ref|XP_003541591.1| PREDICTED: DNA-directed RNA polymerase E sub...   286   1e-74
ref|XP_002303926.1| predicted protein [Populus trichocarpa] gi|2...   214   5e-53

>ref|XP_003627850.1| Protein DCL [Medicago truncatula] gi|355521872|gb|AET02326.1| Protein
            DCL [Medicago truncatula]
          Length = 481

 Score =  294 bits (753), Expect = 3e-77
 Identities = 138/204 (67%), Positives = 163/204 (79%)
 Frame = -3

Query: 1234 DSQNESNQAASSRGWDSQIVSANSDGDRNYQWGKQGRESFKKNRYEGSQGWGSNAGDXXX 1055
            DS+NESNQ A SRGWDSQ+ SANS+ D+++QWGKQGR+SFKKNR+EGSQ  G NAGD   
Sbjct: 215  DSKNESNQTAGSRGWDSQVASANSESDKSFQWGKQGRDSFKKNRFEGSQSGGPNAGDWKN 274

Query: 1054 XXXXXXXPGQRLDIYSSEEQDVLKDIEPXXXXXXXXXXXQGYNDGDPLAADDQHFVLENV 875
                   PGQR ++Y+ EEQD++KDIEP           QGYNDGDPLA +DQ +VLENV
Sbjct: 275  RSRPVRPPGQRFELYTPEEQDIMKDIEPIVQSIRRIMQLQGYNDGDPLANEDQKYVLENV 334

Query: 874  FEHHPDKETKMGAGVDHVMVSRHSNFQESRCFYVVLKDGKREDFSYRKCLDNLIRKKYPD 695
            FEHHPDKETKMG GVDHVMVS+HSNFQ+SRC YVVLKDGK+EDFSYRKCL+NL+RKKYP+
Sbjct: 335  FEHHPDKETKMGVGVDHVMVSKHSNFQDSRCLYVVLKDGKKEDFSYRKCLENLVRKKYPE 394

Query: 694  IADSFIGKYFWKPRGRRDQNQTQN 623
             A+SF GKYF KP+ R  ++QT N
Sbjct: 395  TAESFCGKYFRKPQPRVKRDQTPN 418


>ref|XP_003627838.1| DNA-directed RNA polymerase subunit [Medicago truncatula]
            gi|355521860|gb|AET02314.1| DNA-directed RNA polymerase
            subunit [Medicago truncatula]
          Length = 2032

 Score =  294 bits (753), Expect = 3e-77
 Identities = 138/204 (67%), Positives = 163/204 (79%)
 Frame = -3

Query: 1234 DSQNESNQAASSRGWDSQIVSANSDGDRNYQWGKQGRESFKKNRYEGSQGWGSNAGDXXX 1055
            DS+NESNQ A SRGWDSQ+ SANS+ D+++QWGKQGR+SFKKNR+EGSQ  G NAGD   
Sbjct: 1766 DSKNESNQTAGSRGWDSQVASANSESDKSFQWGKQGRDSFKKNRFEGSQSGGPNAGDWKN 1825

Query: 1054 XXXXXXXPGQRLDIYSSEEQDVLKDIEPXXXXXXXXXXXQGYNDGDPLAADDQHFVLENV 875
                   PGQR ++Y+ EEQD++KDIEP           QGYNDGDPLA +DQ +VLENV
Sbjct: 1826 RSRPVRPPGQRFELYTPEEQDIMKDIEPIVQSIRRIMQLQGYNDGDPLANEDQKYVLENV 1885

Query: 874  FEHHPDKETKMGAGVDHVMVSRHSNFQESRCFYVVLKDGKREDFSYRKCLDNLIRKKYPD 695
            FEHHPDKETKMG GVDHVMVS+HSNFQ+SRC YVVLKDGK+EDFSYRKCL+NL+RKKYP+
Sbjct: 1886 FEHHPDKETKMGVGVDHVMVSKHSNFQDSRCLYVVLKDGKKEDFSYRKCLENLVRKKYPE 1945

Query: 694  IADSFIGKYFWKPRGRRDQNQTQN 623
             A+SF GKYF KP+ R  ++QT N
Sbjct: 1946 TAESFCGKYFRKPQPRVKRDQTPN 1969


>ref|XP_003545837.1| PREDICTED: DNA-directed RNA polymerase E subunit 1-like [Glycine max]
          Length = 2098

 Score =  291 bits (745), Expect = 2e-76
 Identities = 150/240 (62%), Positives = 171/240 (71%), Gaps = 6/240 (2%)
 Frame = -3

Query: 1234 DSQNESNQAASSRGWDSQIVSANSDGDRNYQWGKQGRESFKKNRYEGSQGWGSNAGDXXX 1055
            DS N+SNQ +SS+GW+S I SANS+ ++ +QWGKQGR+SFKKNR+EGSQG GSNAGD   
Sbjct: 1859 DSHNQSNQNSSSQGWESHIASANSESEKGFQWGKQGRDSFKKNRFEGSQGRGSNAGDWKN 1918

Query: 1054 XXXXXXXPGQRLDIYSSEEQDVLKDIEPXXXXXXXXXXXQGYNDGDPLAADDQHFVLENV 875
                   PGQRLDIYSS EQDVLKDIEP           QGYNDGDPLAA+DQ FVLENV
Sbjct: 1919 RNRPPRAPGQRLDIYSSGEQDVLKDIEPIMQSIRRIMQQQGYNDGDPLAAEDQLFVLENV 1978

Query: 874  FEHHPDKETKMGAGVDHVMVSRHSNFQESRCFYVVLKDGKREDFSYRKCLDNLIRKKYPD 695
            FEHHPDKETKMG G+D+VMV++HS+FQESRCFYVV KDG+ +DFSYRKCL N I KKYPD
Sbjct: 1979 FEHHPDKETKMGTGIDYVMVNKHSSFQESRCFYVVCKDGESKDFSYRKCLANYISKKYPD 2038

Query: 694  IADSFIGKYFWKPRGRRDQNQT---QNXXXXXXXXXXXXXXXAPVPVE---TNVPMETNE 533
            +A+SF+GKYF KPR R DQ  T                    A  P E   T  PMETNE
Sbjct: 2039 LAESFLGKYFRKPRARGDQTATPGRDEAATPGEQTATPGRDEAATPAEQISTPTPMETNE 2098


>ref|XP_003541591.1| PREDICTED: DNA-directed RNA polymerase E subunit 1-like [Glycine max]
          Length = 2020

 Score =  286 bits (731), Expect = 1e-74
 Identities = 140/202 (69%), Positives = 162/202 (80%)
 Frame = -3

Query: 1234 DSQNESNQAASSRGWDSQIVSANSDGDRNYQWGKQGRESFKKNRYEGSQGWGSNAGDXXX 1055
            DS N+SNQ +SS+GW+S I SANS+ ++ +QWGK GR+SFKKNR+EGSQG GSNAGD   
Sbjct: 1801 DSHNQSNQNSSSQGWESHIASANSENEKGFQWGK-GRDSFKKNRFEGSQGRGSNAGDWKN 1859

Query: 1054 XXXXXXXPGQRLDIYSSEEQDVLKDIEPXXXXXXXXXXXQGYNDGDPLAADDQHFVLENV 875
                   PGQRLDIYSSEEQDVLKDIEP           QGY+DGDPLAA+DQ FVLENV
Sbjct: 1860 RNRPPRAPGQRLDIYSSEEQDVLKDIEPIMQSIRRIMQQQGYSDGDPLAAEDQLFVLENV 1919

Query: 874  FEHHPDKETKMGAGVDHVMVSRHSNFQESRCFYVVLKDGKREDFSYRKCLDNLIRKKYPD 695
            FEHHPDKETKMGAG+D+VMV++HS+FQESRCFYVV KDG+ +DFSYRKCL N I KKYPD
Sbjct: 1920 FEHHPDKETKMGAGIDYVMVNKHSSFQESRCFYVVCKDGQSKDFSYRKCLANYISKKYPD 1979

Query: 694  IADSFIGKYFWKPRGRRDQNQT 629
            +A+SF+GKYF KPR R DQ  T
Sbjct: 1980 LAESFLGKYFRKPRARGDQTAT 2001


>ref|XP_002303926.1| predicted protein [Populus trichocarpa] gi|222841358|gb|EEE78905.1|
            predicted protein [Populus trichocarpa]
          Length = 1020

 Score =  214 bits (544), Expect = 5e-53
 Identities = 107/199 (53%), Positives = 131/199 (65%), Gaps = 13/199 (6%)
 Frame = -3

Query: 1195 GWDSQIVSANSDGDRNYQWGKQGRESFKKNRYEGSQGWGSNAGDXXXXXXXXXXPG---- 1028
            GW        +   R+ QWG+Q RE FKK+R+EGS+GWGSN GD          P     
Sbjct: 810  GWGVPNSGGGNGSGRDQQWGQQSRE-FKKDRFEGSRGWGSNNGDWKNKRNRPSKPHEDLN 868

Query: 1027 ---------QRLDIYSSEEQDVLKDIEPXXXXXXXXXXXQGYNDGDPLAADDQHFVLENV 875
                     QRLD+++S+EQD+L DIEP            GYNDGDPL+ADDQ +VL+NV
Sbjct: 869  ASGIFTTTRQRLDVFTSQEQDILSDIEPLMLSIRRIMHQTGYNDGDPLSADDQSYVLDNV 928

Query: 874  FEHHPDKETKMGAGVDHVMVSRHSNFQESRCFYVVLKDGKREDFSYRKCLDNLIRKKYPD 695
            F +HPDK  KMGAG+DHV VSRHSNFQESRCFY+V  DG ++DFSYRKCL+N I+ KYPD
Sbjct: 929  FHYHPDKAVKMGAGIDHVTVSRHSNFQESRCFYIVSTDGCKQDFSYRKCLENFIKGKYPD 988

Query: 694  IADSFIGKYFWKPRGRRDQ 638
            +AD FI KYF + RG R +
Sbjct: 989  LADEFIAKYFAR-RGNRQR 1006


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