BLASTX nr result

ID: Glycyrrhiza23_contig00015735 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00015735
         (1098 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003524350.1| PREDICTED: probable ATP-dependent RNA helica...   385   e-104
ref|XP_003532529.1| PREDICTED: probable ATP-dependent RNA helica...   379   e-103
ref|XP_002277625.2| PREDICTED: probable ATP-dependent RNA helica...   303   4e-80
ref|XP_004160445.1| PREDICTED: probable ATP-dependent RNA helica...   299   9e-79
ref|XP_004137549.1| PREDICTED: probable ATP-dependent RNA helica...   299   9e-79

>ref|XP_003524350.1| PREDICTED: probable ATP-dependent RNA helicase DHX36-like [Glycine
           max]
          Length = 1180

 Score =  385 bits (988), Expect = e-104
 Identities = 208/299 (69%), Positives = 231/299 (77%), Gaps = 4/299 (1%)
 Frame = -1

Query: 885 RITLPLRFSSFSTAIDLDWNWNHRHRHGAHSTLAMPFCHQNFSTYGRFAAYQXXXXXXXX 706
           R  + LR  S S A+ +  N   R       T   PF HQ  STYGRFA YQ        
Sbjct: 40  RTAIRLRHHSCSAALQVVKNTRQR-------TFKFPFWHQRSSTYGRFA-YQDVSSDESD 91

Query: 705 VEEFASSHSRPNNQQLGGSSLENIDEWRWKLTMLLRNKDEQEVVSKDKKDRRDFQQLEAL 526
           VE FASS S  +NQQLG S+ ENID+WRWKLTML+RNKDEQE VS++KKDRRDF+QL  L
Sbjct: 92  VE-FASSPS--HNQQLGDSTHENIDDWRWKLTMLMRNKDEQEAVSREKKDRRDFEQLSTL 148

Query: 525 ATRMGLYSRQYAKVVVFSKAPLPNYRPDLDDKRPQREVMLPFGVHREVDTHLRAHLSHKA 346
           ATRMGLYSRQYA+VVVFSKAPLPNYRPDLDDKRPQREV+LP GVH+EVD HL AHLS KA
Sbjct: 149 ATRMGLYSRQYARVVVFSKAPLPNYRPDLDDKRPQREVVLPLGVHKEVDAHLLAHLSQKA 208

Query: 345 TN----LGDSLGRSSDAGNIPANEGIYEQPEPTTYNSVVKEKILRRRSLQLHHQQEDWQE 178
            N    + DSL  SSD+ +IPANE +YEQPEP T+NSVVKEKIL+R+SLQLHHQQ+DWQE
Sbjct: 209 RNKWDFMEDSLHNSSDSRSIPANERMYEQPEPVTHNSVVKEKILQRKSLQLHHQQQDWQE 268

Query: 177 SPEGQKMLEFRRSLPAFKEKDAFLKXXXXXXXXXVSGETGCGKTTQLPQYILETEIEAA 1
           SPEGQKMLEFRRSLPAFKEKDAFL+         VSGETGCGKTTQLPQYILE+EIEAA
Sbjct: 269 SPEGQKMLEFRRSLPAFKEKDAFLRVISQSQVVVVSGETGCGKTTQLPQYILESEIEAA 327


>ref|XP_003532529.1| PREDICTED: probable ATP-dependent RNA helicase DHX36-like [Glycine
           max]
          Length = 1177

 Score =  379 bits (972), Expect = e-103
 Identities = 206/299 (68%), Positives = 231/299 (77%), Gaps = 4/299 (1%)
 Frame = -1

Query: 885 RITLPLRFSSFSTAIDLDWNWNHRHRHGAHSTLAMPFCHQNFSTYGRFAAYQXXXXXXXX 706
           R  + LR  S S A+ +  N   R       TL +PF HQ  STYGRFA YQ        
Sbjct: 37  RTAIRLRHHSCSFALQVVKNTRQR-------TLKLPFWHQRSSTYGRFA-YQDVSSDESD 88

Query: 705 VEEFASSHSRPNNQQLGGSSLENIDEWRWKLTMLLRNKDEQEVVSKDKKDRRDFQQLEAL 526
           VE FASS S  +NQQLG S+ ENIDEWRWKLTML+RNKD+QEVVS++KKDRRDF+QL  +
Sbjct: 89  VE-FASSPS--HNQQLGDSTHENIDEWRWKLTMLMRNKDDQEVVSREKKDRRDFEQLSTV 145

Query: 525 ATRMGLYSRQYAKVVVFSKAPLPNYRPDLDDKRPQREVMLPFGVHREVDTHLRAHLSHKA 346
           A+RMGLYSRQYA+VVVFSKAPLPNYRPDLDDKRPQREV+LP GVH+EVD HL AHLS KA
Sbjct: 146 ASRMGLYSRQYARVVVFSKAPLPNYRPDLDDKRPQREVVLPLGVHKEVDAHLLAHLSQKA 205

Query: 345 TN----LGDSLGRSSDAGNIPANEGIYEQPEPTTYNSVVKEKILRRRSLQLHHQQEDWQE 178
            N    L DSL +S D+ +IPANEG+YEQPEP T+NSVVKEKIL R+SLQL H+Q DWQE
Sbjct: 206 RNKWGSLSDSLHKSRDSRSIPANEGMYEQPEPMTHNSVVKEKILDRKSLQLLHRQHDWQE 265

Query: 177 SPEGQKMLEFRRSLPAFKEKDAFLKXXXXXXXXXVSGETGCGKTTQLPQYILETEIEAA 1
           SPEGQKMLEFRRSLPAFKEKDAFL+         VSGETGCGKTTQLPQYILE+E EAA
Sbjct: 266 SPEGQKMLEFRRSLPAFKEKDAFLRVISQNQVVVVSGETGCGKTTQLPQYILESETEAA 324


>ref|XP_002277625.2| PREDICTED: probable ATP-dependent RNA helicase DHX36-like [Vitis
           vinifera]
          Length = 1178

 Score =  303 bits (777), Expect = 4e-80
 Identities = 167/295 (56%), Positives = 200/295 (67%), Gaps = 8/295 (2%)
 Frame = -1

Query: 861 SSFSTAIDLDWNWNHRHRHGAHSTLAMPFCHQNFSTYGRFAAYQXXXXXXXXVEEFASSH 682
           SS + A  L+ +W  R+       +A+P+     S YGRFA             E A   
Sbjct: 51  SSGACARSLELDWRQRN-------VALPYLFHQNSRYGRFAYDDFSEYDSDREVESAQQ- 102

Query: 681 SRPNNQQLGGSSLENIDEWRWKLTMLLRNKDEQEVVSKDKKDRRDFQQLEALATRMGLYS 502
                QQ+  S+ ENIDEW+WKLTML+RNKDEQEVVS +KKDRRDF+Q+ ALATRMGLYS
Sbjct: 103 -----QQMRASTHENIDEWKWKLTMLIRNKDEQEVVSTEKKDRRDFEQISALATRMGLYS 157

Query: 501 RQYAKVVVFSKAPLPNYRPDLDDKRPQREVMLPFGVHREVDTHLRAHLSHKATN------ 340
            QY++VVVFSK PLPNYR DLDDKRPQREV+LPFG+ REV  HL+ +LS K+ +      
Sbjct: 158 CQYSRVVVFSKVPLPNYRSDLDDKRPQREVVLPFGLQREVHAHLKEYLSQKSMSRESFSD 217

Query: 339 --LGDSLGRSSDAGNIPANEGIYEQPEPTTYNSVVKEKILRRRSLQLHHQQEDWQESPEG 166
             L  S+G SS        EG YEQ EP T  SVV E+IL+R+SLQ+ +QQ+DWQES EG
Sbjct: 218 KTLSRSIGNSS-----VTEEGFYEQQEPLTQTSVVMERILKRKSLQIRNQQQDWQESSEG 272

Query: 165 QKMLEFRRSLPAFKEKDAFLKXXXXXXXXXVSGETGCGKTTQLPQYILETEIEAA 1
           QKM EFRRSLPA+KE++A L          VSGETGCGKTTQLPQYILE+EIEAA
Sbjct: 273 QKMQEFRRSLPAYKEREALLNAISQNQVVVVSGETGCGKTTQLPQYILESEIEAA 327


>ref|XP_004160445.1| PREDICTED: probable ATP-dependent RNA helicase DHX36-like [Cucumis
           sativus]
          Length = 1231

 Score =  299 bits (765), Expect = 9e-79
 Identities = 163/269 (60%), Positives = 195/269 (72%), Gaps = 6/269 (2%)
 Frame = -1

Query: 789 LAMPFC-HQNFSTYGRFAAYQXXXXXXXXVEEFASSHSRPNNQQLGGSSLENIDEWRWKL 613
           +A PF  HQ+   YGRFA             EF S  +     Q   S+L+N+DEWRWKL
Sbjct: 95  IAFPFGQHQSSYNYGRFACDDVSSDESDV--EFGSPQA-----QRSSSTLDNVDEWRWKL 147

Query: 612 TMLLRNKDEQEVVSKDKKDRRDFQQLEALATRMGLYSRQYAKVVVFSKAPLPNYRPDLDD 433
           TMLLRN +E EVVS++KKDRRDF+QL ALATRM L+SRQY++VVVFSK PLPNYRPDLDD
Sbjct: 148 TMLLRNNEEVEVVSREKKDRRDFEQLSALATRMNLHSRQYSRVVVFSKDPLPNYRPDLDD 207

Query: 432 KRPQREVMLPFGVHREVDTHLRAH-LSHKATNLG----DSLGRSSDAGNIPANEGIYEQP 268
           KRPQREV+LPFGV REV+ HLR +  S+K+ + G      L  S  A N   N G+++  
Sbjct: 208 KRPQREVVLPFGVQREVEGHLRLYQSSYKSVSRGCFSNSYLPNSGIAENCANNNGLFQHQ 267

Query: 267 EPTTYNSVVKEKILRRRSLQLHHQQEDWQESPEGQKMLEFRRSLPAFKEKDAFLKXXXXX 88
           EP+T  SVV EKILRR+SLQL +QQ++WQES EGQKM+EFR+SLPAFKE++A LK     
Sbjct: 268 EPSTTQSVVMEKILRRKSLQLRYQQQEWQESLEGQKMIEFRKSLPAFKEREALLKAISEN 327

Query: 87  XXXXVSGETGCGKTTQLPQYILETEIEAA 1
               VSGETGCGKTTQLPQYILE+EIEAA
Sbjct: 328 QVVVVSGETGCGKTTQLPQYILESEIEAA 356


>ref|XP_004137549.1| PREDICTED: probable ATP-dependent RNA helicase DHX36-like [Cucumis
           sativus]
          Length = 1168

 Score =  299 bits (765), Expect = 9e-79
 Identities = 163/269 (60%), Positives = 195/269 (72%), Gaps = 6/269 (2%)
 Frame = -1

Query: 789 LAMPFC-HQNFSTYGRFAAYQXXXXXXXXVEEFASSHSRPNNQQLGGSSLENIDEWRWKL 613
           +A PF  HQ+   YGRFA             EF S  +     Q   S+L+N+DEWRWKL
Sbjct: 48  IAFPFGQHQSSYNYGRFACDDVSSDESDV--EFGSPQA-----QRSSSTLDNVDEWRWKL 100

Query: 612 TMLLRNKDEQEVVSKDKKDRRDFQQLEALATRMGLYSRQYAKVVVFSKAPLPNYRPDLDD 433
           TMLLRN +E EVVS++KKDRRDF+QL ALATRM L+SRQY++VVVFSK PLPNYRPDLDD
Sbjct: 101 TMLLRNNEEVEVVSREKKDRRDFEQLSALATRMNLHSRQYSRVVVFSKDPLPNYRPDLDD 160

Query: 432 KRPQREVMLPFGVHREVDTHLRAH-LSHKATNLG----DSLGRSSDAGNIPANEGIYEQP 268
           KRPQREV+LPFGV REV+ HLR +  S+K+ + G      L  S  A N   N G+++  
Sbjct: 161 KRPQREVVLPFGVQREVEGHLRLYQSSYKSVSRGCFSNSYLPNSGIAENCANNNGLFQHQ 220

Query: 267 EPTTYNSVVKEKILRRRSLQLHHQQEDWQESPEGQKMLEFRRSLPAFKEKDAFLKXXXXX 88
           EP+T  SVV EKILRR+SLQL +QQ++WQES EGQKM+EFR+SLPAFKE++A LK     
Sbjct: 221 EPSTTQSVVMEKILRRKSLQLRYQQQEWQESLEGQKMIEFRKSLPAFKEREALLKAISEN 280

Query: 87  XXXXVSGETGCGKTTQLPQYILETEIEAA 1
               VSGETGCGKTTQLPQYILE+EIEAA
Sbjct: 281 QVVVVSGETGCGKTTQLPQYILESEIEAA 309


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