BLASTX nr result

ID: Glycyrrhiza23_contig00015726 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00015726
         (583 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003628467.1| Pre-mRNA-splicing factor SF2 [Medicago trunc...    82   7e-14
emb|CBI36848.3| unnamed protein product [Vitis vinifera]               60   2e-07
gb|AFK43168.1| unknown [Medicago truncatula]                           46   2e-06

>ref|XP_003628467.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
           gi|355522489|gb|AET02943.1| Pre-mRNA-splicing factor SF2
           [Medicago truncatula]
          Length = 347

 Score = 82.0 bits (201), Expect = 7e-14
 Identities = 35/39 (89%), Positives = 36/39 (92%)
 Frame = -3

Query: 518 GNLQHTGNWKLGTWWDLVQLPATQFVVEIGKQGDHGLPF 402
           GNL+HTGNWKLGTWWDLVQLP TQFVVEIGKQ D GLPF
Sbjct: 299 GNLRHTGNWKLGTWWDLVQLPTTQFVVEIGKQRDQGLPF 337


>emb|CBI36848.3| unnamed protein product [Vitis vinifera]
          Length = 46

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 26/41 (63%), Positives = 32/41 (78%)
 Frame = -2

Query: 477 VGFGSIACNSICCGDWETRRSWIAILELDVLCIKAIGIWKS 355
           +G+ S ACNS  CGDWE RRSWIAI++LD   + AIGIW+S
Sbjct: 1   MGYDSNACNSFGCGDWEQRRSWIAIVKLDYCELSAIGIWES 41


>gb|AFK43168.1| unknown [Medicago truncatula]
          Length = 80

 Score = 45.8 bits (107), Expect(2) = 2e-06
 Identities = 18/21 (85%), Positives = 19/21 (90%)
 Frame = -2

Query: 114 TVTWERHQRCWIEFDKGTCGF 52
           TVT ERHQ CWI+FDKGTCGF
Sbjct: 13  TVTLERHQGCWIKFDKGTCGF 33



 Score = 31.2 bits (69), Expect(2) = 2e-06
 Identities = 13/17 (76%), Positives = 13/17 (76%)
 Frame = -3

Query: 53 FKFCCLWNFCRSRSRSR 3
          F  C LW FCRSRSRSR
Sbjct: 33 FILCYLWIFCRSRSRSR 49


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