BLASTX nr result

ID: Glycyrrhiza23_contig00015717 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00015717
         (974 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003542187.1| PREDICTED: DAZ-associated protein 1-like [Gl...   356   e-105
ref|XP_003601524.1| RNA-binding protein [Medicago truncatula] gi...   327   2e-95
ref|XP_002522793.1| Heterogeneous nuclear ribonucleoprotein A1, ...   311   2e-87
ref|XP_002267309.1| PREDICTED: heterogeneous nuclear ribonucleop...   316   3e-87
ref|XP_002271592.1| PREDICTED: heterogeneous nuclear ribonucleop...   313   3e-87

>ref|XP_003542187.1| PREDICTED: DAZ-associated protein 1-like [Glycine max]
          Length = 352

 Score =  356 bits (913), Expect(2) = e-105
 Identities = 173/185 (93%), Positives = 182/185 (98%)
 Frame = +2

Query: 83  MGSRKSDNPHSGDGASPGKIFIGGLAKDTTLETFVKYFERYGEITDSVIMKDRHTGRPRG 262
           M SRK DNPHSGDGASPGKIFIGGLAKDTTLETFVKYFE+YGEITDSVIMKDRHTGRPRG
Sbjct: 1   MASRKFDNPHSGDGASPGKIFIGGLAKDTTLETFVKYFEKYGEITDSVIMKDRHTGRPRG 60

Query: 263 FGFITYADPSVVDQVIQEDHVINGKQVEIKRTIPKGSSQANDFKTKKIFVGGIPTAVTED 442
           FGFITYADPSVVDQVIQE+HV+NGKQVEIKRTIPKGSSQANDFKTKKIFVGGIPT+V+ED
Sbjct: 61  FGFITYADPSVVDQVIQENHVVNGKQVEIKRTIPKGSSQANDFKTKKIFVGGIPTSVSED 120

Query: 443 ELKSFFSEYGKVVEHEIIRDHTTKRSRGFGFIVFDSDKVVDNLLADGNMIDMAGTQVEIK 622
           ELK+FFS+YGKVVEHEIIRDHTTKRSRGFGFIVFDS+KVVDN+LADGNMIDM GTQVEIK
Sbjct: 121 ELKNFFSKYGKVVEHEIIRDHTTKRSRGFGFIVFDSEKVVDNILADGNMIDMGGTQVEIK 180

Query: 623 KAEPK 637
           KAEPK
Sbjct: 181 KAEPK 185



 Score = 53.9 bits (128), Expect(2) = e-105
 Identities = 25/27 (92%), Positives = 26/27 (96%)
 Frame = +1

Query: 688 KKAEPKKSSNSASIPPFASDSRARSYN 768
           KKAEPKKSSN AS+PPFASDSRARSYN
Sbjct: 180 KKAEPKKSSNPASLPPFASDSRARSYN 206


>ref|XP_003601524.1| RNA-binding protein [Medicago truncatula]
           gi|355490572|gb|AES71775.1| RNA-binding protein
           [Medicago truncatula]
          Length = 370

 Score =  327 bits (838), Expect(2) = 2e-95
 Identities = 166/203 (81%), Positives = 173/203 (85%), Gaps = 18/203 (8%)
 Frame = +2

Query: 83  MGSRKSDNPHSGDGASPGKIFIGGLAKDTTLETFVKYFERYGEITDSVIMKDRHTGRPRG 262
           M SRKSDNPHSGDGASPGKIFIGGLAKDTTLE FVKYFERYGEITDSVIMKDRHTGRPRG
Sbjct: 1   MASRKSDNPHSGDGASPGKIFIGGLAKDTTLEEFVKYFERYGEITDSVIMKDRHTGRPRG 60

Query: 263 FGFITYADPSVVDQVIQEDHVINGKQVEIKRTIPKGSSQANDFKTKKIFVGGIPTAVTED 442
           FGFITYAD SVVDQVIQE+H+IN KQVEIKRTIPKG+SQ NDFKTKKIFVGGIP  V+ED
Sbjct: 61  FGFITYADASVVDQVIQENHIINDKQVEIKRTIPKGASQTNDFKTKKIFVGGIPATVSED 120

Query: 443 ELKSFFSEYGKVVEHEIIRDHTTKRSRGFGFIVFDSDKVVDNLLADGNMIDMAGTQ---- 610
           ELK FFS++G VVEHEIIRDHTTKRSRGFGF+VFDSDK VDNLLADGNMIDM  TQ    
Sbjct: 121 ELKIFFSKHGNVVEHEIIRDHTTKRSRGFGFVVFDSDKAVDNLLADGNMIDMDDTQVSLV 180

Query: 611 --------------VEIKKAEPK 637
                         VEIKKAEPK
Sbjct: 181 RLFMVFKIETGDATVEIKKAEPK 203



 Score = 49.3 bits (116), Expect(2) = 2e-95
 Identities = 23/27 (85%), Positives = 24/27 (88%)
 Frame = +1

Query: 688 KKAEPKKSSNSASIPPFASDSRARSYN 768
           KKAEPKKSSNS+S P F SDSRARSYN
Sbjct: 198 KKAEPKKSSNSSSFPSFGSDSRARSYN 224


>ref|XP_002522793.1| Heterogeneous nuclear ribonucleoprotein A1, putative [Ricinus
           communis] gi|223538031|gb|EEF39644.1| Heterogeneous
           nuclear ribonucleoprotein A1, putative [Ricinus
           communis]
          Length = 348

 Score =  311 bits (797), Expect(2) = 2e-87
 Identities = 149/181 (82%), Positives = 168/181 (92%)
 Frame = +2

Query: 95  KSDNPHSGDGASPGKIFIGGLAKDTTLETFVKYFERYGEITDSVIMKDRHTGRPRGFGFI 274
           KSDNPHSGDGASPGKIFIGGLAKDTT  TF K+F RYGEITDSVIMKDR+TG+PRGFGFI
Sbjct: 6   KSDNPHSGDGASPGKIFIGGLAKDTTYATFNKHFGRYGEITDSVIMKDRYTGQPRGFGFI 65

Query: 275 TYADPSVVDQVIQEDHVINGKQVEIKRTIPKGSSQANDFKTKKIFVGGIPTAVTEDELKS 454
           TYADPSVVD+VI++ HVI+GKQVEIKRTIPKGS Q+ DFKTKKIFVGGIP++VTEDE K 
Sbjct: 66  TYADPSVVDKVIEDTHVIHGKQVEIKRTIPKGSGQSKDFKTKKIFVGGIPSSVTEDEFKG 125

Query: 455 FFSEYGKVVEHEIIRDHTTKRSRGFGFIVFDSDKVVDNLLADGNMIDMAGTQVEIKKAEP 634
           FFS+YG+VVEH+IIRDH T RSRGFGFI+FDS++ VD +L++GNMIDMAGTQVEIKKAEP
Sbjct: 126 FFSKYGQVVEHQIIRDHETNRSRGFGFIIFDSEETVDEMLSNGNMIDMAGTQVEIKKAEP 185

Query: 635 K 637
           K
Sbjct: 186 K 186



 Score = 38.5 bits (88), Expect(2) = 2e-87
 Identities = 17/27 (62%), Positives = 20/27 (74%)
 Frame = +1

Query: 688 KKAEPKKSSNSASIPPFASDSRARSYN 768
           KKAEPKK+SN    P + S+SR RSYN
Sbjct: 181 KKAEPKKASNPPPAPSYGSNSRGRSYN 207


>ref|XP_002267309.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 [Vitis
           vinifera]
          Length = 360

 Score =  316 bits (810), Expect(2) = 3e-87
 Identities = 151/185 (81%), Positives = 171/185 (92%)
 Frame = +2

Query: 83  MGSRKSDNPHSGDGASPGKIFIGGLAKDTTLETFVKYFERYGEITDSVIMKDRHTGRPRG 262
           MGSRK+   HS DGASPGKIF+GGLAK+T L+TF KYFE+YGEITDSV+MKDR TGRPRG
Sbjct: 1   MGSRKAPKTHSDDGASPGKIFVGGLAKETNLDTFTKYFEKYGEITDSVVMKDRQTGRPRG 60

Query: 263 FGFITYADPSVVDQVIQEDHVINGKQVEIKRTIPKGSSQANDFKTKKIFVGGIPTAVTED 442
           FGFITYADPSVVD+VIQE H+INGKQVEIKRTIP+GSSQ+NDFKT+KIFVGGI T+V+ED
Sbjct: 61  FGFITYADPSVVDEVIQETHIINGKQVEIKRTIPRGSSQSNDFKTRKIFVGGILTSVSED 120

Query: 443 ELKSFFSEYGKVVEHEIIRDHTTKRSRGFGFIVFDSDKVVDNLLADGNMIDMAGTQVEIK 622
           E K+FFS+YGKVVEHEII DH TKRSRGFGFIVFD+++VVD+LL +GNMIDM GTQVEIK
Sbjct: 121 EFKNFFSKYGKVVEHEIIHDHVTKRSRGFGFIVFDNEQVVDDLLTNGNMIDMEGTQVEIK 180

Query: 623 KAEPK 637
           KAEPK
Sbjct: 181 KAEPK 185



 Score = 33.1 bits (74), Expect(2) = 3e-87
 Identities = 17/28 (60%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
 Frame = +1

Query: 688 KKAEPKKSS-NSASIPPFASDSRARSYN 768
           KKAEPKKSS N    P F  DSR + YN
Sbjct: 180 KKAEPKKSSSNPGRAPSFGGDSRMQMYN 207


>ref|XP_002271592.1| PREDICTED: heterogeneous nuclear ribonucleoprotein 27C [Vitis
           vinifera] gi|147768836|emb|CAN78130.1| hypothetical
           protein VITISV_036088 [Vitis vinifera]
          Length = 348

 Score =  313 bits (801), Expect(2) = 3e-87
 Identities = 150/186 (80%), Positives = 172/186 (92%), Gaps = 1/186 (0%)
 Frame = +2

Query: 83  MGSR-KSDNPHSGDGASPGKIFIGGLAKDTTLETFVKYFERYGEITDSVIMKDRHTGRPR 259
           MGS+ KSDNPH+GDGASPGKIFIGGLAKDTT  TF K+F +YG+ITDSVIMKDR+TG+PR
Sbjct: 1   MGSKSKSDNPHTGDGASPGKIFIGGLAKDTTYATFNKHFGKYGDITDSVIMKDRYTGQPR 60

Query: 260 GFGFITYADPSVVDQVIQEDHVINGKQVEIKRTIPKGSSQANDFKTKKIFVGGIPTAVTE 439
           GFGFITYADPSVVD+VI++ HVINGKQVEIKRTIPKGS Q+ DFKTKKIFVGG+P+ VTE
Sbjct: 61  GFGFITYADPSVVDRVIEDTHVINGKQVEIKRTIPKGSGQSKDFKTKKIFVGGVPSTVTE 120

Query: 440 DELKSFFSEYGKVVEHEIIRDHTTKRSRGFGFIVFDSDKVVDNLLADGNMIDMAGTQVEI 619
           DE K+FFS+YGKVVEH+IIRDH T RSRGFGFI+FDS++VVD +++ GNMIDMAGTQVEI
Sbjct: 121 DEFKNFFSKYGKVVEHQIIRDHETNRSRGFGFIIFDSEEVVDEMISKGNMIDMAGTQVEI 180

Query: 620 KKAEPK 637
           KKAEPK
Sbjct: 181 KKAEPK 186



 Score = 36.6 bits (83), Expect(2) = 3e-87
 Identities = 16/27 (59%), Positives = 21/27 (77%)
 Frame = +1

Query: 688 KKAEPKKSSNSASIPPFASDSRARSYN 768
           KKAEPKK+SN    P + S+SRARS++
Sbjct: 181 KKAEPKKASNPPPAPAYGSNSRARSFS 207


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