BLASTX nr result

ID: Glycyrrhiza23_contig00015656 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00015656
         (574 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001236345.1| uncharacterized protein LOC100306274 [Glycin...   174   7e-42
ref|XP_003526569.1| PREDICTED: 39S ribosomal protein L41-A, mito...   167   1e-39
gb|AFK44300.1| unknown [Lotus japonicus]                              165   6e-39
ref|XP_002308991.1| predicted protein [Populus trichocarpa] gi|2...   162   3e-38
emb|CBI19201.3| unnamed protein product [Vitis vinifera]              161   8e-38

>ref|NP_001236345.1| uncharacterized protein LOC100306274 [Glycine max]
           gi|255628073|gb|ACU14381.1| unknown [Glycine max]
          Length = 92

 Score =  174 bits (442), Expect = 7e-42
 Identities = 84/92 (91%), Positives = 85/92 (92%)
 Frame = +2

Query: 11  MPLGLILGIGRAFRRKRTSSLDILSSKRAPRGYYKGKNCKPTGFHTRKGGYVVVQEKLPN 190
           MPLGLILGIGRAFRRKR SSLDILSSKRAPRGYYKGKNCKPTGFHTRKGGYVV+QEKLPN
Sbjct: 1   MPLGLILGIGRAFRRKRPSSLDILSSKRAPRGYYKGKNCKPTGFHTRKGGYVVMQEKLPN 60

Query: 191 YVVPDLTDFKLKPYVSQCPIGVNASVASQTTK 286
           YVVPDLTDFKLKPY SQCPI  N S ASQT K
Sbjct: 61  YVVPDLTDFKLKPYASQCPIEANTSEASQTAK 92


>ref|XP_003526569.1| PREDICTED: 39S ribosomal protein L41-A, mitochondrial-like [Glycine
           max]
          Length = 88

 Score =  167 bits (423), Expect = 1e-39
 Identities = 80/88 (90%), Positives = 82/88 (93%)
 Frame = +2

Query: 11  MPLGLILGIGRAFRRKRTSSLDILSSKRAPRGYYKGKNCKPTGFHTRKGGYVVVQEKLPN 190
           MPLGLILGIGRAFRRKR SSLDILSSKRAPRGYYKGKNCKPTGFHTRKGGYVV+QEKLPN
Sbjct: 1   MPLGLILGIGRAFRRKRPSSLDILSSKRAPRGYYKGKNCKPTGFHTRKGGYVVMQEKLPN 60

Query: 191 YVVPDLTDFKLKPYVSQCPIGVNASVAS 274
           YVVPDL+DFKLKPYVSQCPI  N S  S
Sbjct: 61  YVVPDLSDFKLKPYVSQCPIEANTSEVS 88


>gb|AFK44300.1| unknown [Lotus japonicus]
          Length = 92

 Score =  165 bits (417), Expect = 6e-39
 Identities = 81/91 (89%), Positives = 82/91 (90%)
 Frame = +2

Query: 11  MPLGLILGIGRAFRRKRTSSLDILSSKRAPRGYYKGKNCKPTGFHTRKGGYVVVQEKLPN 190
           MPLGLILGIG AFRRKRTSSLDIL+SKRAPR YYKGKNCKPTGFHTRKGGYVVV EKLP 
Sbjct: 1   MPLGLILGIGGAFRRKRTSSLDILTSKRAPRDYYKGKNCKPTGFHTRKGGYVVVPEKLPK 60

Query: 191 YVVPDLTDFKLKPYVSQCPIGVNASVASQTT 283
           YVVPDLTDFKLKPYVSQCP  VN S  SQTT
Sbjct: 61  YVVPDLTDFKLKPYVSQCPREVNTSEDSQTT 91


>ref|XP_002308991.1| predicted protein [Populus trichocarpa] gi|222854967|gb|EEE92514.1|
           predicted protein [Populus trichocarpa]
          Length = 92

 Score =  162 bits (411), Expect = 3e-38
 Identities = 79/92 (85%), Positives = 81/92 (88%)
 Frame = +2

Query: 11  MPLGLILGIGRAFRRKRTSSLDILSSKRAPRGYYKGKNCKPTGFHTRKGGYVVVQEKLPN 190
           MPLGLI GIGRA RRKRTSSLDILSSKRAPR YYKGKNCKPTGFHTRKGGYVVV EKLPN
Sbjct: 1   MPLGLITGIGRAMRRKRTSSLDILSSKRAPRTYYKGKNCKPTGFHTRKGGYVVVPEKLPN 60

Query: 191 YVVPDLTDFKLKPYVSQCPIGVNASVASQTTK 286
           YVVPDLTDFKLKPYVSQCP  V  + AS+  K
Sbjct: 61  YVVPDLTDFKLKPYVSQCPTEVKTTEASELAK 92


>emb|CBI19201.3| unnamed protein product [Vitis vinifera]
          Length = 175

 Score =  161 bits (407), Expect = 8e-38
 Identities = 77/92 (83%), Positives = 83/92 (90%)
 Frame = +2

Query: 11  MPLGLILGIGRAFRRKRTSSLDILSSKRAPRGYYKGKNCKPTGFHTRKGGYVVVQEKLPN 190
           M LGLILGIGRAFRRKRTSSLDILSSKRAPR YYKGKNCKPTGFHTRKGGYV++QEKLPN
Sbjct: 79  MALGLILGIGRAFRRKRTSSLDILSSKRAPRDYYKGKNCKPTGFHTRKGGYVLMQEKLPN 138

Query: 191 YVVPDLTDFKLKPYVSQCPIGVNASVASQTTK 286
           YVVPDLTDFKLKPYVSQCP  V  + A++  +
Sbjct: 139 YVVPDLTDFKLKPYVSQCPREVKTNEATEAAQ 170


Top