BLASTX nr result

ID: Glycyrrhiza23_contig00015605 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00015605
         (899 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003613588.1| F-box/FBD/LRR-repeat protein [Medicago trunc...   254   2e-65
gb|AFK36982.1| unknown [Medicago truncatula]                          254   2e-65
ref|XP_003630442.1| F-box/FBD/LRR-repeat protein [Medicago trunc...   211   1e-52
ref|XP_003625084.1| F-box/FBD/LRR-repeat protein [Medicago trunc...   209   5e-52
gb|ABD33321.1| Cyclin-like F-box; FBD [Medicago truncatula]           208   1e-51

>ref|XP_003613588.1| F-box/FBD/LRR-repeat protein [Medicago truncatula]
           gi|355514923|gb|AES96546.1| F-box/FBD/LRR-repeat protein
           [Medicago truncatula]
          Length = 499

 Score =  254 bits (649), Expect = 2e-65
 Identities = 148/277 (53%), Positives = 182/277 (65%), Gaps = 6/277 (2%)
 Frame = +2

Query: 59  LPSNVIDGILEHLNIVDSVRTSILSRKWRYKWASVPQLEFSVTFFDNY------EHLGNL 220
           LPSNVIDGIL+HLNI D  RTSILSRKWR  W S P LEF   FFD Y      +H   +
Sbjct: 101 LPSNVIDGILQHLNIRDLARTSILSRKWRDIWISFPWLEFDKDFFDLYDLKDFKDHSPEV 160

Query: 221 AISSIITEVILLHNGPIHKFTLDIPLECSSVIESLNKWILYLSRNGIKYLALGYRDYGYP 400
            I  IITEV+LLHNGPI+KFTL IP   +     + KWIL+LSR G+K++ L   +   P
Sbjct: 161 CI--IITEVLLLHNGPINKFTLFIPSGFNIPFGCIVKWILFLSRKGVKFIQLASNE-SVP 217

Query: 401 YQMPSHVFSCQELTYLKLYFFRLSVPPNFCGFKNLLALHLYYIAFESSAALRSLISGCPL 580
           Y++PSH FS Q+LT++++  F+L VPPNFCGFK+L+  H   + FE   AL SLISGCPL
Sbjct: 218 YRVPSHFFSFQKLTHVRICKFKLLVPPNFCGFKSLVHFHFERMTFE-FGALESLISGCPL 276

Query: 581 LEELTISCCEGFECIDFFVPTLKVLSVYGDENEVIKSICLNKAKNLIDLTLIIAWHMVEK 760
           LEEL I  C G ECID   PTLKV S+  +  + IKSICL KAKNLIDLTL++       
Sbjct: 277 LEELYIVNCSGIECIDLSAPTLKVFSI--EHIQAIKSICLEKAKNLIDLTLVL------N 328

Query: 761 GTGFDFIIKVLPKINSLTLGTTCHKILFADIISQTLL 871
             G   + K LP+I  LT+G    K+L+ADII  + L
Sbjct: 329 QDGVSSLNKNLPEIQRLTMGFV-SKMLYADIIHPSQL 364


>gb|AFK36982.1| unknown [Medicago truncatula]
          Length = 418

 Score =  254 bits (648), Expect = 2e-65
 Identities = 147/272 (54%), Positives = 180/272 (66%), Gaps = 6/272 (2%)
 Frame = +2

Query: 59  LPSNVIDGILEHLNIVDSVRTSILSRKWRYKWASVPQLEFSVTFFDNY------EHLGNL 220
           LPSNVIDGIL+HLNI D  RTSILSRKWR  W S P LEF   FFD Y      +H   +
Sbjct: 20  LPSNVIDGILQHLNIRDLARTSILSRKWRDIWISFPWLEFDKDFFDLYDLKDFKDHSPEV 79

Query: 221 AISSIITEVILLHNGPIHKFTLDIPLECSSVIESLNKWILYLSRNGIKYLALGYRDYGYP 400
            I  IITEV+LLHNGPI+KFTL IP   +     + KWIL+LSR G+K++ L   +   P
Sbjct: 80  CI--IITEVLLLHNGPINKFTLFIPSGFNIPFGCIVKWILFLSRKGVKFIQLASNE-SVP 136

Query: 401 YQMPSHVFSCQELTYLKLYFFRLSVPPNFCGFKNLLALHLYYIAFESSAALRSLISGCPL 580
           Y++PSH FS Q+LT++++  F+L VPPNFCGFK+L+  H   + FE   AL SLISGCPL
Sbjct: 137 YRVPSHFFSFQKLTHVRICKFKLLVPPNFCGFKSLVHFHFERMTFE-FGALESLISGCPL 195

Query: 581 LEELTISCCEGFECIDFFVPTLKVLSVYGDENEVIKSICLNKAKNLIDLTLIIAWHMVEK 760
           LEEL I  C G ECID   PTLKV S+  +  + IKSICL KAKNLIDLTL++       
Sbjct: 196 LEELYIVNCSGIECIDLSAPTLKVFSI--EHIQAIKSICLEKAKNLIDLTLVL------N 247

Query: 761 GTGFDFIIKVLPKINSLTLGTTCHKILFADII 856
             G   + K LP+I  LT+G    K+L+ADII
Sbjct: 248 QDGVSSLNKNLPEIQRLTMGFV-SKMLYADII 278


>ref|XP_003630442.1| F-box/FBD/LRR-repeat protein [Medicago truncatula]
           gi|355524464|gb|AET04918.1| F-box/FBD/LRR-repeat protein
           [Medicago truncatula]
          Length = 380

 Score =  211 bits (538), Expect = 1e-52
 Identities = 131/279 (46%), Positives = 161/279 (57%), Gaps = 1/279 (0%)
 Frame = +2

Query: 59  LPSNVIDGILEHLNIVDSVRTSILSRKWRYKWASVPQLEFSVTFFDNYEHLGNLAISSII 238
           LPSNVIDGILEHLN  D VRTS+LSRKWRY W +VP+LEF   FF  Y+ L  L +S II
Sbjct: 20  LPSNVIDGILEHLNARDLVRTSVLSRKWRYMWITVPRLEFCQDFFCKYKDLEALDVSRII 79

Query: 239 TEVILLHNGPIHKFTLDIPLECSSVIES-LNKWILYLSRNGIKYLALGYRDYGYPYQMPS 415
           TEV+ LHNGPI+KF L I           L +W+++ SR G+K + L   D  Y Y+MPS
Sbjct: 80  TEVLFLHNGPIYKFILFITSNFLGFKSGYLIRWVMFSSRKGVKNIQL-VNDRYYIYRMPS 138

Query: 416 HVFSCQELTYLKLYFFRLSVPPNFCGFKNLLALHLYYIAFESSAALRSLISGCPLLEELT 595
           H+FSCQELT+                  N L L L ++         SLI GC LL+EL 
Sbjct: 139 HLFSCQELTH------------------NALDLSLVHL---------SLIFGCSLLQELY 171

Query: 596 ISCCEGFECIDFFVPTLKVLSVYGDENEVIKSICLNKAKNLIDLTLIIAWHMVEKGTGFD 775
              C G+EC+D   PTL V  +    N  IKSICL KAKNLIDLTLI+         G  
Sbjct: 172 TVQCSGYECVDLSAPTLTVFRIQCKCNHAIKSICLEKAKNLIDLTLIV------YRDGIS 225

Query: 776 FIIKVLPKINSLTLGTTCHKILFADIISQTLLKSFSSLE 892
            +  +LPKI  LT+G    K+L+ADII  + L S   L+
Sbjct: 226 GLNNILPKIQRLTVGLD-SKMLYADIIHPSQLISLKYLK 263


>ref|XP_003625084.1| F-box/FBD/LRR-repeat protein [Medicago truncatula]
           gi|355500099|gb|AES81302.1| F-box/FBD/LRR-repeat protein
           [Medicago truncatula]
          Length = 432

 Score =  209 bits (533), Expect = 5e-52
 Identities = 140/290 (48%), Positives = 177/290 (61%), Gaps = 10/290 (3%)
 Frame = +2

Query: 59  LPSNVIDGILEHLNIVDSVRTSILSRKWRYKWASVPQLEFSVTFFDNYEHLGNL---AIS 229
           LP NVIDGIL HL+I D V TSILS++WRYKW   P+L FS  FF+ YE L +L      
Sbjct: 16  LPCNVIDGILSHLDIKDLVGTSILSKQWRYKWTKAPRLWFSEDFFEEYEDLEDLEDPVTY 75

Query: 230 SIITEVILLHNGPIHKFTLDI--PLECSSVIESLNKWILYLSRNGIKYLALGYRDYGYPY 403
            IIT+V++ H GPI KF L I    +    IE L+KWI  LS   IK+L L   +  +P 
Sbjct: 76  RIITDVLMQHQGPIDKFGLFISNDYKFEITIEHLDKWIPILSERNIKHLELVNHE-THPD 134

Query: 404 QMPSHV-FSCQELTYLKLYFFRLSVPPNFCGFKNLLALHLYYIAFESSAALRSLISGCPL 580
           QM   V   C+ELTY K   F LS+PP+F GF+ LL LHL ++ FE   A  SLISGCPL
Sbjct: 135 QMLYIVDLPCKELTYSKFLGFDLSIPPDFSGFERLLELHLLFVRFE-PGAFESLISGCPL 193

Query: 581 LEELTISCCEGFECIDFFVPTLKVLSVYGDENEVIKSICLNKAKNLIDLTLIIAWHMVEK 760
           L+ L    C+ FE  DF  PTL+VL +  + N  +KSICL KA NLIDL L        +
Sbjct: 194 LKNLHFVLCKEFEYFDFAPPTLEVLLI--EFNPKMKSICLKKANNLIDLAL-----KATE 246

Query: 761 GTGFDFIIKVLPK-INSLTLGTT--CHKILFADIISQTLLK-SFSSLEYL 898
              F  +IK LPK I  L++ +    +K+ +A+II  TLLK SFSS++YL
Sbjct: 247 SCTFG-LIKSLPKNIQRLSISSRRGIYKMQYANIIHPTLLKSSFSSMKYL 295


>gb|ABD33321.1| Cyclin-like F-box; FBD [Medicago truncatula]
          Length = 430

 Score =  208 bits (530), Expect = 1e-51
 Identities = 139/288 (48%), Positives = 174/288 (60%), Gaps = 8/288 (2%)
 Frame = +2

Query: 59  LPSNVIDGILEHLNIVDSVRTSILSRKWRYKWASVPQLEFSVTFFDNYEHLGNL---AIS 229
           LP NVIDGIL HL+I D V TSILS++WRYKW   P+L FS  FF+ YE L +L      
Sbjct: 16  LPCNVIDGILSHLDIKDLVGTSILSKQWRYKWTKAPRLWFSEDFFEEYEDLEDLEDPVTY 75

Query: 230 SIITEVILLHNGPIHKFTLDI--PLECSSVIESLNKWILYLSRNGIKYLALGYRDYGYPY 403
            IIT+V++ H GPI KF L I    +    IE L+KWI  LS   IK+L L   +  +P 
Sbjct: 76  RIITDVLMQHQGPIDKFGLFISNDYKFEITIEHLDKWIPILSERNIKHLELVNHE-THPD 134

Query: 404 QMPSHV-FSCQELTYLKLYFFRLSVPPNFCGFKNLLALHLYYIAFESSAALRSLISGCPL 580
           QM   V   C+ELTY K   F LS+PP+F GF+ LL LHL ++ FE   A  SLISGCPL
Sbjct: 135 QMLYIVDLPCKELTYSKFLGFDLSIPPDFSGFERLLELHLLFVRFE-PGAFESLISGCPL 193

Query: 581 LEELTISCCEGFECIDFFVPTLKVLSVYGDENEVIKSICLNKAKNLIDLTLIIAWHMVEK 760
           L+ L    C+ FE  DF  PTL+VL +  + N  +KSICL KA NLIDL L        +
Sbjct: 194 LKNLHFVLCKEFEYFDFAPPTLEVLLI--EFNPKMKSICLKKANNLIDLAL-----KATE 246

Query: 761 GTGFDFIIKVLPK-INSLTLGTTCHKILFADIISQTLLK-SFSSLEYL 898
              F  +IK LPK I  L++ +      +A+II  TLLK SFSS++YL
Sbjct: 247 SCTFG-LIKSLPKNIQRLSISSRRGIYKYANIIHPTLLKSSFSSMKYL 293


Top