BLASTX nr result

ID: Glycyrrhiza23_contig00015587 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00015587
         (1674 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003523201.1| PREDICTED: probable E3 ubiquitin-protein lig...   712   0.0  
ref|XP_003528074.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ...   673   0.0  
ref|XP_002273073.1| PREDICTED: E3 ubiquitin-protein ligase HERC2...   572   e-160
ref|XP_002307065.1| predicted protein [Populus trichocarpa] gi|2...   568   e-159
ref|XP_004144697.1| PREDICTED: probable E3 ubiquitin-protein lig...   546   e-153

>ref|XP_003523201.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
            max]
          Length = 417

 Score =  712 bits (1838), Expect = 0.0
 Identities = 346/401 (86%), Positives = 363/401 (90%)
 Frame = -1

Query: 1614 GLGFLKRSFSREPGKRFAALWGNGDYGRLGLGNLDSQWIPAVCPTFHNQNLKAIACGGAH 1435
            GLGF  RSFSR+ GKRFAALWGNGDYGRLGLGNLDSQW P VCP F N+ L AIACGGAH
Sbjct: 17   GLGFPTRSFSRDAGKRFAALWGNGDYGRLGLGNLDSQWKPVVCPAFRNKTLNAIACGGAH 76

Query: 1434 TLFLTDNGCVYATGLNDFGQLGISESKQYSVEPLQVFGHEKIVVRISAGYNHSCAITVDG 1255
            TLFLT++GCVYATGLNDFGQLG+SESK YSVEPL VFG EK VV+ISAGYNHSCAITVDG
Sbjct: 77   TLFLTEDGCVYATGLNDFGQLGVSESKHYSVEPLCVFGEEKKVVQISAGYNHSCAITVDG 136

Query: 1254 ELYMWGKNTNGQLGLGKRAPNIVPLPTKVEYLDGITIKMAALGSEHSVAISDGGEAFXXX 1075
            ELYMWGKNT+GQLGLGKRAPNIVPLPTKVEYL GI IKMAALGSEHSVAISDGG AF   
Sbjct: 137  ELYMWGKNTSGQLGLGKRAPNIVPLPTKVEYLKGINIKMAALGSEHSVAISDGGAAFSWG 196

Query: 1074 XXXXXXXXXXXXXSILGFSRSYSEYTPRLIKDLEGIKVKYVAAGLLNSACTDENGSVFIF 895
                         S+LGF +SYSEYTPRLIKDLEGIKVKYVAAGLLNSACTDENG VF+F
Sbjct: 197  IGVSGRLGHGHESSVLGFFKSYSEYTPRLIKDLEGIKVKYVAAGLLNSACTDENGCVFVF 256

Query: 894  GEKGIDKLRLKEISNATKPSLISELPYSEEVACGGYHTCVLTNSGELYTWGSNENGCLGI 715
            GE+GI+KLRLKE+S+ATKPSLISELP S+EVACGGYHTCVLTNSGELYTWGSNENGCLGI
Sbjct: 257  GERGIEKLRLKEMSDATKPSLISELPSSKEVACGGYHTCVLTNSGELYTWGSNENGCLGI 316

Query: 714  GSSDVIHLPEKVKGPFLESSVSQVSCGWKHTAAISEGRVFTWGWGGSNGTFSEVGHSSGG 535
            GSSDVIHLPEKV+GPFL+SSVSQVSCGWKHTAAISEGRVFTWGWGGSNGTFSEVGHSS G
Sbjct: 317  GSSDVIHLPEKVQGPFLKSSVSQVSCGWKHTAAISEGRVFTWGWGGSNGTFSEVGHSSSG 376

Query: 534  QLGHESDVDYINPTRVCFGEDVKALQVSCGFNHAGAILEYA 412
            QLGH SDVDYINPTRVCFGEDVKALQVSCGFNH GAILEYA
Sbjct: 377  QLGHGSDVDYINPTRVCFGEDVKALQVSCGFNHTGAILEYA 417


>ref|XP_003528074.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase
            HERC4-like [Glycine max]
          Length = 404

 Score =  673 bits (1736), Expect = 0.0
 Identities = 326/391 (83%), Positives = 349/391 (89%)
 Frame = -1

Query: 1584 REPGKRFAALWGNGDYGRLGLGNLDSQWIPAVCPTFHNQNLKAIACGGAHTLFLTDNGCV 1405
            R  GKRF ALWGNGD+GRLGLGNLDSQW P VCP F ++ LKAIACGGAHTLFLTDNGCV
Sbjct: 15   RASGKRFVALWGNGDFGRLGLGNLDSQWKPVVCPAFRDRTLKAIACGGAHTLFLTDNGCV 74

Query: 1404 YATGLNDFGQLGISESKQYSVEPLQVFGHEKIVVRISAGYNHSCAITVDGELYMWGKNTN 1225
            YATGLNDFGQLG+SESK YSVEPL VFG EK VV++SAGYNHSCAITVDGELYMWGKNT+
Sbjct: 75   YATGLNDFGQLGVSESKHYSVEPLCVFGEEKKVVQVSAGYNHSCAITVDGELYMWGKNTS 134

Query: 1224 GQLGLGKRAPNIVPLPTKVEYLDGITIKMAALGSEHSVAISDGGEAFXXXXXXXXXXXXX 1045
             QLGLGKRAPNIVPLPTKVEYL+GI IKMAALGS+HS+AISDGGEAF             
Sbjct: 135  VQLGLGKRAPNIVPLPTKVEYLNGINIKMAALGSDHSLAISDGGEAFSWGVGVSGRLGHG 194

Query: 1044 XXXSILGFSRSYSEYTPRLIKDLEGIKVKYVAAGLLNSACTDENGSVFIFGEKGIDKLRL 865
               SILGF +SYSEYTPRLIKDLEGIKVKYVA+GLLNSACTDENGSVF+FGE+ I++LRL
Sbjct: 195  HESSILGFFKSYSEYTPRLIKDLEGIKVKYVASGLLNSACTDENGSVFVFGERAIERLRL 254

Query: 864  KEISNATKPSLISELPYSEEVACGGYHTCVLTNSGELYTWGSNENGCLGIGSSDVIHLPE 685
            K +S+ATKPSLI ELP S +V CGGYHTCVLTNSGELYTW SNENGCLGIGSSDVIHLPE
Sbjct: 255  KAMSDATKPSLIGELP-SSKVVCGGYHTCVLTNSGELYTWXSNENGCLGIGSSDVIHLPE 313

Query: 684  KVKGPFLESSVSQVSCGWKHTAAISEGRVFTWGWGGSNGTFSEVGHSSGGQLGHESDVDY 505
            K+ GPFL+SSVSQ+SCGWK+TAAISEGRVFTWGWGGSNGTFSEVGHSS GQLGH SDVDY
Sbjct: 314  KIXGPFLKSSVSQLSCGWKNTAAISEGRVFTWGWGGSNGTFSEVGHSSSGQLGHGSDVDY 373

Query: 504  INPTRVCFGEDVKALQVSCGFNHAGAILEYA 412
            INPTRVCFGEDVKALQVSCGFNH GAILEYA
Sbjct: 374  INPTRVCFGEDVKALQVSCGFNHTGAILEYA 404


>ref|XP_002273073.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Vitis vinifera]
            gi|296082630|emb|CBI21635.3| unnamed protein product
            [Vitis vinifera]
          Length = 420

 Score =  572 bits (1473), Expect = e-160
 Identities = 276/401 (68%), Positives = 321/401 (80%)
 Frame = -1

Query: 1617 LGLGFLKRSFSREPGKRFAALWGNGDYGRLGLGNLDSQWIPAVCPTFHNQNLKAIACGGA 1438
            LGLGF +R  S EP KRFAALWGNGD+GRLGLG+L+SQW PAVC  F + +L AIACGGA
Sbjct: 17   LGLGFCRRLSSSEPRKRFAALWGNGDFGRLGLGSLESQWRPAVCSAFDHHSLVAIACGGA 76

Query: 1437 HTLFLTDNGCVYATGLNDFGQLGISESKQYSVEPLQVFGHEKIVVRISAGYNHSCAITVD 1258
            HTLFLT++GCVYA GLNDFGQLG+S  K Y+ EPL+V    K ++ I+AGY HS AIT D
Sbjct: 77   HTLFLTESGCVYAAGLNDFGQLGVSVDKNYTTEPLEVSALPKKIIHIAAGYYHSAAITAD 136

Query: 1257 GELYMWGKNTNGQLGLGKRAPNIVPLPTKVEYLDGITIKMAALGSEHSVAISDGGEAFXX 1078
            GELYMWGKN+NGQLGLGK+A N V +P+KVE L+GI+IKM ALGSEHSVA +D GEA   
Sbjct: 137  GELYMWGKNSNGQLGLGKKAANAVSVPSKVECLNGISIKMVALGSEHSVAATDQGEALSW 196

Query: 1077 XXXXXXXXXXXXXXSILGFSRSYSEYTPRLIKDLEGIKVKYVAAGLLNSACTDENGSVFI 898
                          S+LGF R+ SEY PRLI+ LEGIKVK VAAGLL+SAC DENGSVFI
Sbjct: 197  GAGGSGRLGHGHESSLLGFFRTSSEYRPRLIRRLEGIKVKNVAAGLLHSACIDENGSVFI 256

Query: 897  FGEKGIDKLRLKEISNATKPSLISELPYSEEVACGGYHTCVLTNSGELYTWGSNENGCLG 718
            FGE+ +DK   +E  NAT PS+ISELPYS++VACGGYHTCV+++SGEL+TWGSNENGCLG
Sbjct: 257  FGERAMDKFGFREAKNATAPSMISELPYSKQVACGGYHTCVISSSGELFTWGSNENGCLG 316

Query: 717  IGSSDVIHLPEKVKGPFLESSVSQVSCGWKHTAAISEGRVFTWGWGGSNGTFSEVGHSSG 538
            +G  + IH PE+++GPF ++ VSQVSCGWKHTAAISEG VFTWGWGGS GTFS+ GHSSG
Sbjct: 317  MGFMETIHFPERIEGPFSKNPVSQVSCGWKHTAAISEGNVFTWGWGGSYGTFSDDGHSSG 376

Query: 537  GQLGHESDVDYINPTRVCFGEDVKALQVSCGFNHAGAILEY 415
            GQLG  SDVD+I P  V F E V+ALQVSCGFNH GAILEY
Sbjct: 377  GQLGQGSDVDHIKPKMVEFEESVRALQVSCGFNHTGAILEY 417


>ref|XP_002307065.1| predicted protein [Populus trichocarpa] gi|222856514|gb|EEE94061.1|
            predicted protein [Populus trichocarpa]
          Length = 419

 Score =  568 bits (1464), Expect = e-159
 Identities = 276/407 (67%), Positives = 323/407 (79%), Gaps = 6/407 (1%)
 Frame = -1

Query: 1620 GLGLGFLKR----SFSREPGKRFAALWGNGDYGRLGLGNLDSQWIPAVC--PTFHNQNLK 1459
            G GLG+  +    S S E  KR AA+WGNGDYGRLG GNLDS W P +    +FHN NLK
Sbjct: 9    GGGLGYCYKRWMSSSSSEGRKRSAAVWGNGDYGRLGYGNLDSMWRPKLMNSSSFHNSNLK 68

Query: 1458 AIACGGAHTLFLTDNGCVYATGLNDFGQLGISESKQYSVEPLQVFGHEKIVVRISAGYNH 1279
            +I+CGGAHTLFLT+ G VYATGLNDFGQLG+S +  Y +EPL+V G +K +V+ISAGY+H
Sbjct: 69   SISCGGAHTLFLTETGRVYATGLNDFGQLGVSNNTTYCMEPLEVSGLKKEIVQISAGYHH 128

Query: 1278 SCAITVDGELYMWGKNTNGQLGLGKRAPNIVPLPTKVEYLDGITIKMAALGSEHSVAISD 1099
            SCAITVDGELY WGKN+NGQLGLGK+A N+VP+PTKVE L GI IKM AL SEHS+A++D
Sbjct: 129  SCAITVDGELYTWGKNSNGQLGLGKKAENVVPVPTKVECLSGINIKMVALASEHSIAVTD 188

Query: 1098 GGEAFXXXXXXXXXXXXXXXXSILGFSRSYSEYTPRLIKDLEGIKVKYVAAGLLNSACTD 919
            GG+A                 S+LGF RS SEYTPR IK LEG+KVK +AAGLL+SAC D
Sbjct: 189  GGQALSWGGGGSGRLGHGHQSSLLGFFRSSSEYTPRHIKKLEGVKVKNIAAGLLHSACID 248

Query: 918  ENGSVFIFGEKGIDKLRLKEISNATKPSLISELPYSEEVACGGYHTCVLTNSGELYTWGS 739
            ENGSV+IFGEK +DKL   + +NAT PS+I +LPYS+EVACGGYHTCV+T+ GELYTWGS
Sbjct: 249  ENGSVYIFGEKAVDKLAFGDANNATTPSMIGKLPYSQEVACGGYHTCVITSGGELYTWGS 308

Query: 738  NENGCLGIGSSDVIHLPEKVKGPFLESSVSQVSCGWKHTAAISEGRVFTWGWGGSNGTFS 559
            NENGCLG GS DV+H+PE+V+GPFL S V +VSCGWKHTAAISEG VFTWGWGGS+GTFS
Sbjct: 309  NENGCLGNGSIDVLHIPERVEGPFLRSPVEKVSCGWKHTAAISEGNVFTWGWGGSHGTFS 368

Query: 558  EVGHSSGGQLGHESDVDYINPTRVCFGEDVKALQVSCGFNHAGAILE 418
            E G SSGGQLGH  D DY+NPT V F + +KAL+VSCGFNH GAILE
Sbjct: 369  EDGLSSGGQLGHGDDFDYVNPTLVAFEKKMKALEVSCGFNHTGAILE 415


>ref|XP_004144697.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Cucumis
            sativus]
          Length = 481

 Score =  546 bits (1406), Expect = e-153
 Identities = 260/396 (65%), Positives = 313/396 (79%)
 Frame = -1

Query: 1602 LKRSFSREPGKRFAALWGNGDYGRLGLGNLDSQWIPAVCPTFHNQNLKAIACGGAHTLFL 1423
            + R F+ + GKRF A+WGNGD+GRLGLGNLDSQW P  C +F  + LK IACGGAHTLFL
Sbjct: 86   ITRWFASDSGKRFGAVWGNGDFGRLGLGNLDSQWSPVPCSSFDREMLKGIACGGAHTLFL 145

Query: 1422 TDNGCVYATGLNDFGQLGISESKQYSVEPLQVFGHEKIVVRISAGYNHSCAITVDGELYM 1243
            T++G VYATGLN+FGQLGIS+ K++S EP++V    K  + ISAGYNHSC +T DGELYM
Sbjct: 146  TESGRVYATGLNNFGQLGISDEKRFSTEPVEV-RIPKEAMHISAGYNHSCVVTADGELYM 204

Query: 1242 WGKNTNGQLGLGKRAPNIVPLPTKVEYLDGITIKMAALGSEHSVAISDGGEAFXXXXXXX 1063
            WG N+NGQLGLGK++   V LPTKV+ LDGI IK AALGS+HS+A++DGGE F       
Sbjct: 205  WGVNSNGQLGLGKKSAKAVHLPTKVDSLDGIVIKRAALGSDHSIAVADGGEVFSWGDGRS 264

Query: 1062 XXXXXXXXXSILGFSRSYSEYTPRLIKDLEGIKVKYVAAGLLNSACTDENGSVFIFGEKG 883
                     + LGF +S SE+TPRLIK+LEGIKVK+VAAG+L+SAC DENG+V+IFGE+ 
Sbjct: 265  GRLGHGHESTFLGFLKSTSEHTPRLIKELEGIKVKHVAAGMLHSACVDENGAVYIFGERA 324

Query: 882  IDKLRLKEISNATKPSLISELPYSEEVACGGYHTCVLTNSGELYTWGSNENGCLGIGSSD 703
             +++   E + AT PSLIS L   EEVACGGYHTCVLT  G+LY+WGSNENGCLG GS+ 
Sbjct: 325  TNRVSFGEANKATTPSLISTLLDCEEVACGGYHTCVLTKGGDLYSWGSNENGCLGNGSTS 384

Query: 702  VIHLPEKVKGPFLESSVSQVSCGWKHTAAISEGRVFTWGWGGSNGTFSEVGHSSGGQLGH 523
            V HLPE+V+GPF +S VS+VSCGWKHTAAIS G +FTWGWGGS+GTFS  GHSSGGQLGH
Sbjct: 385  VSHLPERVEGPFSKSPVSKVSCGWKHTAAISGGAIFTWGWGGSHGTFSVDGHSSGGQLGH 444

Query: 522  ESDVDYINPTRVCFGEDVKALQVSCGFNHAGAILEY 415
             SDVDY+ PT++  GE+VK +QVSCGFNH GAILEY
Sbjct: 445  GSDVDYVKPTKIDLGENVKVVQVSCGFNHTGAILEY 480


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