BLASTX nr result

ID: Glycyrrhiza23_contig00015576 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00015576
         (634 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003610502.1| Integrator complex subunit-like protein [Med...   238   5e-61
emb|CBI24224.3| unnamed protein product [Vitis vinifera]              229   4e-58
ref|XP_002275456.1| PREDICTED: integrator complex subunit 3 homo...   229   4e-58
ref|XP_002527040.1| conserved hypothetical protein [Ricinus comm...   215   5e-54
ref|XP_002298478.1| predicted protein [Populus trichocarpa] gi|2...   209   4e-52

>ref|XP_003610502.1| Integrator complex subunit-like protein [Medicago truncatula]
           gi|355511557|gb|AES92699.1| Integrator complex
           subunit-like protein [Medicago truncatula]
          Length = 560

 Score =  238 bits (608), Expect = 5e-61
 Identities = 120/162 (74%), Positives = 131/162 (80%), Gaps = 1/162 (0%)
 Frame = +2

Query: 2   VDIVRFICCAHHPPNEIIQSDVIPRWAVIGWLLKCCRK-NYVEANVKLALFYDWLFFDER 178
           VDIVRFICCAHHPPNEIIQSD++PRWAVIGWLL   RK + VEAN KLALFYDWLFFDE+
Sbjct: 311 VDIVRFICCAHHPPNEIIQSDIVPRWAVIGWLLTTFRKKSCVEANAKLALFYDWLFFDEK 370

Query: 179 VDNIMNIEPAILLMVHSVPKYAHMTDAXXXXXXXXVDNYDVEHKGIIVKGVSSAFQLLVS 358
           VDNIMNIEPAILLMVHS+ +Y  MT+         VDNYD+EHK IIVKGVS AF+ L S
Sbjct: 371 VDNIMNIEPAILLMVHSITQYVEMTNTLLEFLLLLVDNYDMEHKDIIVKGVSLAFRFLES 430

Query: 359 RGVIQSLDVLTSCPALSPSLKEGLGRLLSGVKLGSSNGFLQG 484
           +GVIQSLD+LTSCP LSPSLKEGL RLLS  K  SS  FL G
Sbjct: 431 KGVIQSLDILTSCPTLSPSLKEGLSRLLSSGKPESSKEFLPG 472


>emb|CBI24224.3| unnamed protein product [Vitis vinifera]
          Length = 563

 Score =  229 bits (583), Expect = 4e-58
 Identities = 110/146 (75%), Positives = 122/146 (83%)
 Frame = +2

Query: 5   DIVRFICCAHHPPNEIIQSDVIPRWAVIGWLLKCCRKNYVEANVKLALFYDWLFFDERVD 184
           DIVRFICC HHP N+IIQSDV+PRWAVIGWLLK CRK+YVEANVKLALFYDWLFFDER+D
Sbjct: 198 DIVRFICCGHHPSNDIIQSDVMPRWAVIGWLLKSCRKSYVEANVKLALFYDWLFFDERID 257

Query: 185 NIMNIEPAILLMVHSVPKYAHMTDAXXXXXXXXVDNYDVEHKGIIVKGVSSAFQLLVSRG 364
           NIMNIEPA+LLMV+SVPKY  MT          VDNYD+E K IIV+GV+SAF +LV RG
Sbjct: 258 NIMNIEPAMLLMVNSVPKYVDMTHTLLEFLLLLVDNYDIERKDIIVRGVASAFNMLVRRG 317

Query: 365 VIQSLDVLTSCPALSPSLKEGLGRLL 442
           V+ S+ VLTSC ALSPSLKE LGR L
Sbjct: 318 VVGSIHVLTSCDALSPSLKEWLGRFL 343


>ref|XP_002275456.1| PREDICTED: integrator complex subunit 3 homolog [Vitis vinifera]
          Length = 928

 Score =  229 bits (583), Expect = 4e-58
 Identities = 110/146 (75%), Positives = 122/146 (83%)
 Frame = +2

Query: 5   DIVRFICCAHHPPNEIIQSDVIPRWAVIGWLLKCCRKNYVEANVKLALFYDWLFFDERVD 184
           DIVRFICC HHP N+IIQSDV+PRWAVIGWLLK CRK+YVEANVKLALFYDWLFFDER+D
Sbjct: 298 DIVRFICCGHHPSNDIIQSDVMPRWAVIGWLLKSCRKSYVEANVKLALFYDWLFFDERID 357

Query: 185 NIMNIEPAILLMVHSVPKYAHMTDAXXXXXXXXVDNYDVEHKGIIVKGVSSAFQLLVSRG 364
           NIMNIEPA+LLMV+SVPKY  MT          VDNYD+E K IIV+GV+SAF +LV RG
Sbjct: 358 NIMNIEPAMLLMVNSVPKYVDMTHTLLEFLLLLVDNYDIERKDIIVRGVASAFNMLVRRG 417

Query: 365 VIQSLDVLTSCPALSPSLKEGLGRLL 442
           V+ S+ VLTSC ALSPSLKE LGR L
Sbjct: 418 VVGSIHVLTSCDALSPSLKEWLGRFL 443


>ref|XP_002527040.1| conserved hypothetical protein [Ricinus communis]
           gi|223533602|gb|EEF35340.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 982

 Score =  215 bits (548), Expect = 5e-54
 Identities = 103/153 (67%), Positives = 121/153 (79%)
 Frame = +2

Query: 2   VDIVRFICCAHHPPNEIIQSDVIPRWAVIGWLLKCCRKNYVEANVKLALFYDWLFFDERV 181
           VDIVRFICCAHHP NE IQSD+IPRWAV+GWLLK C KNYV+ANVKLALFYDWLFFDER+
Sbjct: 272 VDIVRFICCAHHPSNETIQSDIIPRWAVVGWLLKTCGKNYVQANVKLALFYDWLFFDERI 331

Query: 182 DNIMNIEPAILLMVHSVPKYAHMTDAXXXXXXXXVDNYDVEHKGIIVKGVSSAFQLLVSR 361
           DNIMNIEP +LL+V S+ KY  MT++        V+NYD++   +I +G+ SAF +LV +
Sbjct: 332 DNIMNIEPGMLLIVCSITKYIDMTNSLLEFLLLLVENYDLDRPHVISRGILSAFNVLVQK 391

Query: 362 GVIQSLDVLTSCPALSPSLKEGLGRLLSGVKLG 460
           GVI SLDVLTSC ALSP LK+ LGRL S  K G
Sbjct: 392 GVIHSLDVLTSCDALSPCLKQRLGRLWSSSKPG 424


>ref|XP_002298478.1| predicted protein [Populus trichocarpa] gi|222845736|gb|EEE83283.1|
           predicted protein [Populus trichocarpa]
          Length = 995

 Score =  209 bits (531), Expect = 4e-52
 Identities = 94/147 (63%), Positives = 121/147 (82%)
 Frame = +2

Query: 2   VDIVRFICCAHHPPNEIIQSDVIPRWAVIGWLLKCCRKNYVEANVKLALFYDWLFFDERV 181
           VDI+RFICCAHHP NEIIQSD++PRWAVIGWLLK CR+ YVEAN+KLALFYDWLFFDE++
Sbjct: 312 VDIIRFICCAHHPSNEIIQSDIVPRWAVIGWLLKSCREKYVEANMKLALFYDWLFFDEKI 371

Query: 182 DNIMNIEPAILLMVHSVPKYAHMTDAXXXXXXXXVDNYDVEHKGIIVKGVSSAFQLLVSR 361
           DNIMNIEPA+LLMV S+PKY  +T +         +NY+ +   +I +G+SSA ++LV +
Sbjct: 372 DNIMNIEPAMLLMVCSIPKYIDITHSLLEFLLFIAENYEEDRNYVIRRGLSSAMRMLVQK 431

Query: 362 GVIQSLDVLTSCPALSPSLKEGLGRLL 442
           GV++S+D+LTSC ALSP L+EGL +L+
Sbjct: 432 GVVRSMDILTSCDALSPFLREGLRKLI 458


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