BLASTX nr result

ID: Glycyrrhiza23_contig00015480 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00015480
         (1057 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003543790.1| PREDICTED: DIS3-like exonuclease 2-like [Gly...   522   e-146
ref|XP_003544141.1| PREDICTED: DIS3-like exonuclease 2-like [Gly...   512   e-143
ref|XP_003614775.1| DIS3-like exonuclease [Medicago truncatula] ...   460   e-127
ref|XP_003614757.1| DIS3-like exonuclease [Medicago truncatula] ...   365   1e-98
ref|XP_002513779.1| RNA binding protein, putative [Ricinus commu...   363   4e-98

>ref|XP_003543790.1| PREDICTED: DIS3-like exonuclease 2-like [Glycine max]
          Length = 1184

 Score =  522 bits (1345), Expect = e-146
 Identities = 263/363 (72%), Positives = 294/363 (80%), Gaps = 12/363 (3%)
 Frame = +3

Query: 3    KIDGVPTDLLISGAQAQNRAVEGDIVALTIDPLPLWTKMKGPNGAYNNTATPEGCNLLTE 182
            KIDG+PTD+ I G  AQNRAVEGD+VA+  DPLPLWTKMKGPNG+ NNTATPEGCNL  +
Sbjct: 247  KIDGMPTDVFIGGIPAQNRAVEGDVVAVKFDPLPLWTKMKGPNGSCNNTATPEGCNLTED 306

Query: 183  DEVXXXXXXXXXXVDADHESAYCGSRPGQNKEDSDHNTTLNRSYP------------SQV 326
             EV          VDA++ESA+  S PGQNKED+D N+ L +SYP            S+ 
Sbjct: 307  KEVGGNICKGKAKVDAEYESAHGRSYPGQNKEDADQNS-LYKSYPFTETTMVYDDITSRG 365

Query: 327  SANHLDPLALASRDSIHGLHCAASESLKINSCSGHNEVINAVEKMCELVNSFPSKLPTGR 506
            S NHLD   +A+ DSI+G HCAA  SLKINSCSG +   NAVEKMC LVNSFPSK PTGR
Sbjct: 366  STNHLDLHGMANHDSINGHHCAAPNSLKINSCSGQS---NAVEKMCLLVNSFPSKRPTGR 422

Query: 507  VVAVIERSPRREGIVGHLNVKPWASFREISKKDAKKNNNLVFEHEYVQLIPTDPKFPNMM 686
            VVA+IERSPRREGIVGH+NVK W SFR+ SKKD KKN NL+ EHEY+QLIPTDPKFPNMM
Sbjct: 423  VVAIIERSPRREGIVGHINVKQWVSFRDTSKKDVKKNKNLISEHEYIQLIPTDPKFPNMM 482

Query: 687  LLVRELPKCIKKRLESGDATVEMDLVAAQIDDWLEESPSPEGQILHIFGRGGEVQPQLDA 866
            LLVR+LPKCIKKR++SGD T++MDLVA QIDDW+EESP PE  IL +FG+GGEVQ QLDA
Sbjct: 483  LLVRKLPKCIKKRMKSGDVTIQMDLVAVQIDDWVEESPFPEAHILRVFGQGGEVQTQLDA 542

Query: 867  ILFQNAICLSEFSPEALSCLPRVPWELPTKEIHSRIDLRNLCIFTIDPSTATDLDDALSI 1046
            ILFQNAICLSEFSPEALSCLP VPWE+P KEI SRIDLRNLCIFTIDPSTATDLDDALSI
Sbjct: 543  ILFQNAICLSEFSPEALSCLPCVPWEIPLKEIQSRIDLRNLCIFTIDPSTATDLDDALSI 602

Query: 1047 EKL 1055
            EKL
Sbjct: 603  EKL 605


>ref|XP_003544141.1| PREDICTED: DIS3-like exonuclease 2-like [Glycine max]
          Length = 1133

 Score =  512 bits (1319), Expect = e-143
 Identities = 261/364 (71%), Positives = 292/364 (80%), Gaps = 13/364 (3%)
 Frame = +3

Query: 3    KIDGVPTDLLISGAQAQNRAVEGDIVALTIDPLPLWTKMKGPNGAYNNTATPEGCNLLTE 182
            KIDG+ TD+ I G  AQNRAV+GDIVA+  DPLPLWTKMKGPNG+ NNTAT EGCNLLTE
Sbjct: 194  KIDGMSTDVFIGGIPAQNRAVQGDIVAVKFDPLPLWTKMKGPNGSCNNTATLEGCNLLTE 253

Query: 183  D-EVXXXXXXXXXXVDADHESAYCGSRPGQNKEDSDHNTTLNRSYP------------SQ 323
            D EV          V A++ESA+C S PGQNKED+D N++  RSYP            SQ
Sbjct: 254  DKEVGGNICNGKAKVGAEYESAHCRSYPGQNKEDADQNSSY-RSYPLPEKTMVYDDITSQ 312

Query: 324  VSANHLDPLALASRDSIHGLHCAASESLKINSCSGHNEVINAVEKMCELVNSFPSKLPTG 503
             S NHLD   +AS DSI+G HCAA +S+K NSCSG +   NA+EKMC LVNSFPSK PTG
Sbjct: 313  GSTNHLDLHGMASHDSINGHHCAAPDSIKNNSCSGQS---NALEKMCLLVNSFPSKRPTG 369

Query: 504  RVVAVIERSPRREGIVGHLNVKPWASFREISKKDAKKNNNLVFEHEYVQLIPTDPKFPNM 683
            RVVA++ERSPRREGIVGH+NVK W SFR+  KKD KKN NL+ EHEY+QL PTDPKFPNM
Sbjct: 370  RVVAIMERSPRREGIVGHINVKQWVSFRDTGKKDLKKNKNLISEHEYIQLTPTDPKFPNM 429

Query: 684  MLLVRELPKCIKKRLESGDATVEMDLVAAQIDDWLEESPSPEGQILHIFGRGGEVQPQLD 863
            MLLVR+LP CIKKR++SGD T+EMDLVAAQIDDW+EESP PE  IL +FGRGGEVQ QLD
Sbjct: 430  MLLVRKLPNCIKKRMKSGDVTIEMDLVAAQIDDWVEESPFPEAHILRVFGRGGEVQTQLD 489

Query: 864  AILFQNAICLSEFSPEALSCLPRVPWELPTKEIHSRIDLRNLCIFTIDPSTATDLDDALS 1043
            AILFQNAICLSEF PEALSCLP VPWE+P KEI SRIDLRNLCIFTIDPSTATDLDDALS
Sbjct: 490  AILFQNAICLSEFLPEALSCLPCVPWEVPLKEIQSRIDLRNLCIFTIDPSTATDLDDALS 549

Query: 1044 IEKL 1055
            IE+L
Sbjct: 550  IEEL 553


>ref|XP_003614775.1| DIS3-like exonuclease [Medicago truncatula]
            gi|355516110|gb|AES97733.1| DIS3-like exonuclease
            [Medicago truncatula]
          Length = 1162

 Score =  460 bits (1184), Expect = e-127
 Identities = 243/363 (66%), Positives = 273/363 (75%), Gaps = 13/363 (3%)
 Frame = +3

Query: 6    IDGVPTDLLISGAQAQNRAVEGDIVALTIDPLPLWTKMKGPNGAYNNTATPEGCNLLTED 185
            IDGVPTD+LI GA AQNRAVEGDIVA+ IDPLPLWTKMKGPN A NNTA  EGCNLL ED
Sbjct: 180  IDGVPTDILIVGAPAQNRAVEGDIVAIKIDPLPLWTKMKGPNVANNNTAVLEGCNLLVED 239

Query: 186  EVXXXXXXXXXX-VDADHESAYCGSRPGQNKEDSDHNTTLNRSYP------------SQV 326
             +           VDADHE +      GQNKE+S  N++  RSYP            +Q 
Sbjct: 240  NIAGDNNCEGIEKVDADHEYS------GQNKEESFDNSSPYRSYPFPEKRYIYENNTTQG 293

Query: 327  SANHLDPLALASRDSIHGLHCAASESLKINSCSGHNEVINAVEKMCELVNSFPSKLPTGR 506
            S NHL  + L  RD+  G +C +  S+KINS SG +EV+NAVEK+C LVNSFPSK PTGR
Sbjct: 294  SPNHLSLIGLTGRDNNDGPNCDSPASIKINSGSGQSEVMNAVEKICLLVNSFPSKRPTGR 353

Query: 507  VVAVIERSPRREGIVGHLNVKPWASFREISKKDAKKNNNLVFEHEYVQLIPTDPKFPNMM 686
            VVAVIERSPRRE IVGHLNVK W   +EI+KKD +KN N V EHEY+QL P DPKFPN+M
Sbjct: 354  VVAVIERSPRRECIVGHLNVKQWVFSQEINKKDPRKNKNSVSEHEYIQLTPIDPKFPNIM 413

Query: 687  LLVRELPKCIKKRLESGDATVEMDLVAAQIDDWLEESPSPEGQILHIFGRGGEVQPQLDA 866
            LLVR+LPK IK RL++GDA +E DLVAAQI DW EESP PEG IL  FGRG E+QP LD+
Sbjct: 414  LLVRDLPKSIKIRLKNGDAAIEKDLVAAQIVDWFEESPFPEGDILQHFGRGSEIQPNLDS 473

Query: 867  ILFQNAICLSEFSPEALSCLPRVPWELPTKEIHSRIDLRNLCIFTIDPSTATDLDDALSI 1046
            ILF+NAICLSEFS EALSCLP   WELP KE+ SR DLRNLCIF+IDPSTATDLDDALSI
Sbjct: 474  ILFKNAICLSEFSAEALSCLPHATWELPLKELQSRTDLRNLCIFSIDPSTATDLDDALSI 533

Query: 1047 EKL 1055
            EKL
Sbjct: 534  EKL 536


>ref|XP_003614757.1| DIS3-like exonuclease [Medicago truncatula]
            gi|355516092|gb|AES97715.1| DIS3-like exonuclease
            [Medicago truncatula]
          Length = 1051

 Score =  365 bits (937), Expect = 1e-98
 Identities = 208/363 (57%), Positives = 237/363 (65%), Gaps = 13/363 (3%)
 Frame = +3

Query: 6    IDGVPTDLLISGAQAQNRAVEGDIVALTIDPLPLWTKMKGPNGAYNNTATPEGCNLLTED 185
            IDGVPTD+LI GA AQNRAVEGDIVA+ IDPLPLWTKMKGPN A NNTA  EGCNLL ED
Sbjct: 180  IDGVPTDILIVGAPAQNRAVEGDIVAIKIDPLPLWTKMKGPNVANNNTAVLEGCNLLVED 239

Query: 186  EVXXXXXXXXXX-VDADHESAYCGSRPGQNKEDSDHNTTLNRSYP------------SQV 326
             +           VDADHE +      GQNKE+S  N++  RSYP            +Q 
Sbjct: 240  NIAGDNNCEGIEKVDADHEYS------GQNKEESFDNSSPYRSYPFPEKRYIYENNTTQG 293

Query: 327  SANHLDPLALASRDSIHGLHCAASESLKINSCSGHNEVINAVEKMCELVNSFPSKLPTGR 506
            S NHL  + L  RD+  G +C +  S+KINS SG +EV+NAVEK+C LVNSFPSK PTGR
Sbjct: 294  SPNHLSLIGLTGRDNNDGPNCDSPASIKINSGSGQSEVMNAVEKICLLVNSFPSKRPTGR 353

Query: 507  VVAVIERSPRREGIVGHLNVKPWASFREISKKDAKKNNNLVFEHEYVQLIPTDPKFPNMM 686
            VVAVIERSPRRE IVGHLNVK W   +EI+KKD +KN N V EHEY+QL P DPKFPN+M
Sbjct: 354  VVAVIERSPRRECIVGHLNVKQWVFSQEINKKDPRKNKNSVSEHEYIQLTPIDPKFPNIM 413

Query: 687  LLVRELPKCIKKRLESGDATVEMDLVAAQIDDWLEESPSPEGQILHIFGRGGEVQPQLDA 866
            LLVR+LPK IK RL++GDA +E DLVAAQI DW EESP PEG IL  FGRG E+Q     
Sbjct: 414  LLVRDLPKSIKIRLKNGDAAIEKDLVAAQIVDWFEESPFPEGDILQHFGRGSEIQ----- 468

Query: 867  ILFQNAICLSEFSPEALSCLPRVPWELPTKEIHSRIDLRNLCIFTIDPSTATDLDDALSI 1046
                             +C   +  E+                F IDPSTATDLDDALSI
Sbjct: 469  -----------------NCKVELTLEI-------------CAFFLIDPSTATDLDDALSI 498

Query: 1047 EKL 1055
            EKL
Sbjct: 499  EKL 501


>ref|XP_002513779.1| RNA binding protein, putative [Ricinus communis]
            gi|223546865|gb|EEF48362.1| RNA binding protein, putative
            [Ricinus communis]
          Length = 1099

 Score =  363 bits (932), Expect = 4e-98
 Identities = 194/358 (54%), Positives = 239/358 (66%), Gaps = 7/358 (1%)
 Frame = +3

Query: 3    KIDGVPTDLLISGAQAQNRAVEGDIVALTIDPLPLWTKMKGPNGAYNNTATPEGCNLLTE 182
            KI+GV TD+LISG   QNRAVEGD+V + +DPLP WTKMKG NG  N+ A  E CN   E
Sbjct: 173  KIEGVSTDVLISGLAVQNRAVEGDMVVIKVDPLPCWTKMKGSNGPSNSIALAEDCNSAVE 232

Query: 183  -DEVXXXXXXXXXXVDADHESAYCGS----RPGQNKEDSDHNTTLNRSYPSQVSANHLDP 347
              E+          V+ DH+ A  GS    + G + EDS   T           A H + 
Sbjct: 233  LSEMASGSCKGKIKVEVDHDFAESGSFSLPQKGIHSEDSSCAT----------EAVHQEL 282

Query: 348  LALASRDSIHGLHCAASESLKINSCSGHNEVINAVEKMCELVNSFPSKLPTGRVVAVIER 527
                  +   G H +ASES    S  G +E  NAV ++C +++S P+K PTGRVVA+IER
Sbjct: 283  NGSTGYNIGIGDHPSASESSNFGSSMGQHEGANAVGRLCTMISSHPTKRPTGRVVAIIER 342

Query: 528  SPRREGIVGHLNVKPWASFREISKKDAKKNNNL--VFEHEYVQLIPTDPKFPNMMLLVRE 701
            SPRR+ I+G LNVK W   RE  KKD+KKN N   + + EY+QL+PTDPKFP MM+L   
Sbjct: 343  SPRRDAIIGFLNVKQWFYCREACKKDSKKNKNSSSISDREYIQLMPTDPKFPKMMVLASS 402

Query: 702  LPKCIKKRLESGDATVEMDLVAAQIDDWLEESPSPEGQILHIFGRGGEVQPQLDAILFQN 881
            LP  IKKRLE GDATVEM+LVAAQID+W +ESPSP   +  IFGRG E++PQL AIL++N
Sbjct: 403  LPDSIKKRLEGGDATVEMELVAAQIDNWDDESPSPHAHVSRIFGRGSELEPQLSAILYEN 462

Query: 882  AICLSEFSPEALSCLPRVPWELPTKEIHSRIDLRNLCIFTIDPSTATDLDDALSIEKL 1055
             IC S+FSPE+LSC+P   WE+P +EI  R DLRNLCIFTIDPSTATDLDDALS+E+L
Sbjct: 463  TICYSDFSPESLSCIPCDSWEVPAEEIRRRKDLRNLCIFTIDPSTATDLDDALSVERL 520


Top