BLASTX nr result

ID: Glycyrrhiza23_contig00015450 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00015450
         (453 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003541796.1| PREDICTED: pentatricopeptide repeat-containi...   251   6e-65
ref|XP_003632211.1| PREDICTED: pentatricopeptide repeat-containi...   201   5e-50
emb|CBI24389.3| unnamed protein product [Vitis vinifera]              201   5e-50
gb|AAF78430.1|AC018748_9 Contains similarity to glycerine-rich p...   182   2e-44
gb|AAG51982.1|AC024260_20 hypothetical protein; 70922-66390 [Ara...   182   2e-44

>ref|XP_003541796.1| PREDICTED: pentatricopeptide repeat-containing protein At1g53600,
           mitochondrial-like [Glycine max]
          Length = 713

 Score =  251 bits (640), Expect = 6e-65
 Identities = 114/150 (76%), Positives = 135/150 (90%)
 Frame = -3

Query: 451 HTCVLKMNLECDLSIQNSLVSFYAKCGNVIDAYRVFMDVVEPNVISYNSIINGFAQNGFA 272
           HTC+LKMNLE +LSIQNSL+SFY+K GNV+DAYR+F+DV+EPNVISYNSII+GFAQNGF 
Sbjct: 452 HTCILKMNLEYNLSIQNSLISFYSKSGNVVDAYRIFLDVIEPNVISYNSIISGFAQNGFG 511

Query: 271 EEALRVYKRMLCEGHEPNHVTFLAVLSACTHAGLVEEGWNLFNTMKSRYQIEPEADHYAC 92
           +EAL +YK+M  EGHEPNHVTFLAVLSACTHAGLV+EGWN+FNTMKS Y IEPEADHYAC
Sbjct: 512 DEALGIYKKMQSEGHEPNHVTFLAVLSACTHAGLVDEGWNIFNTMKSHYGIEPEADHYAC 571

Query: 91  MVDLLGRAGRLNQAWEFVMRMPERPNSDVW 2
           MVD+LGRAG L++A + +  MP +P+S VW
Sbjct: 572 MVDILGRAGLLDEAIDLIRSMPFKPHSGVW 601



 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 33/125 (26%), Positives = 66/125 (52%)
 Frame = -3

Query: 418 DLSIQNSLVSFYAKCGNVIDAYRVFMDVVEPNVISYNSIINGFAQNGFAEEALRVYKRML 239
           D +  N+L++ Y K G V +A R+F ++ E +V+S++++++G  ++G    A  ++ RM 
Sbjct: 167 DPACSNALINGYLKMGEVNEALRIFENMGERDVVSWSAMVDGLCRDGRVAAARDLFDRM- 225

Query: 238 CEGHEPNHVTFLAVLSACTHAGLVEEGWNLFNTMKSRYQIEPEADHYACMVDLLGRAGRL 59
               + N V++ A++      G  +EG+ LF  MK    +E  +     M    G  GR+
Sbjct: 226 ---PDRNVVSWSAMIDGYMGEGFFQEGFCLFMDMKREGLVEVNSTTMTIMFKACGNCGRM 282

Query: 58  NQAWE 44
           ++  +
Sbjct: 283 SEGMQ 287



 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 30/108 (27%), Positives = 61/108 (56%)
 Frame = -3

Query: 451 HTCVLKMNLECDLSIQNSLVSFYAKCGNVIDAYRVFMDVVEPNVISYNSIINGFAQNGFA 272
           H  V ++  E D  + NS+++ Y+  G    A +VF  V + +++++NS+I+G+  N   
Sbjct: 289 HGLVSRLGFEFDNVLSNSVITMYSMLGCTDMADKVFCTVSDKDIVTWNSLISGYIHNNEV 348

Query: 271 EEALRVYKRMLCEGHEPNHVTFLAVLSACTHAGLVEEGWNLFNTMKSR 128
           E A RV+ RM  +    + +++ A+++  + +G VE    LFN + ++
Sbjct: 349 EAAYRVFGRMPVK----DVISWTAMIAGFSKSGRVENAIELFNMLPAK 392


>ref|XP_003632211.1| PREDICTED: pentatricopeptide repeat-containing protein At1g53600,
           mitochondrial [Vitis vinifera]
          Length = 744

 Score =  201 bits (511), Expect = 5e-50
 Identities = 92/150 (61%), Positives = 115/150 (76%)
 Frame = -3

Query: 451 HTCVLKMNLECDLSIQNSLVSFYAKCGNVIDAYRVFMDVVEPNVISYNSIINGFAQNGFA 272
           HT V+KM +E DLSIQNSLVS Y KCGNV D +++F  +  PN++S+NS+I GFAQNGF 
Sbjct: 522 HTLVVKMGMEFDLSIQNSLVSMYTKCGNVADGHQIFTSINSPNIVSFNSMITGFAQNGFG 581

Query: 271 EEALRVYKRMLCEGHEPNHVTFLAVLSACTHAGLVEEGWNLFNTMKSRYQIEPEADHYAC 92
           EEAL ++ +ML EG +PN +TFL VLSACTH GL+E+GWN F +MKS YQIEP   HYAC
Sbjct: 582 EEALELFHKMLNEGQKPNEITFLGVLSACTHVGLLEQGWNYFKSMKSLYQIEPGPHHYAC 641

Query: 91  MVDLLGRAGRLNQAWEFVMRMPERPNSDVW 2
           +VDLLGRAG L+ A + +  MP  P+S VW
Sbjct: 642 IVDLLGRAGFLDDAIDLIRSMPCEPHSGVW 671


>emb|CBI24389.3| unnamed protein product [Vitis vinifera]
          Length = 665

 Score =  201 bits (511), Expect = 5e-50
 Identities = 92/150 (61%), Positives = 115/150 (76%)
 Frame = -3

Query: 451 HTCVLKMNLECDLSIQNSLVSFYAKCGNVIDAYRVFMDVVEPNVISYNSIINGFAQNGFA 272
           HT V+KM +E DLSIQNSLVS Y KCGNV D +++F  +  PN++S+NS+I GFAQNGF 
Sbjct: 443 HTLVVKMGMEFDLSIQNSLVSMYTKCGNVADGHQIFTSINSPNIVSFNSMITGFAQNGFG 502

Query: 271 EEALRVYKRMLCEGHEPNHVTFLAVLSACTHAGLVEEGWNLFNTMKSRYQIEPEADHYAC 92
           EEAL ++ +ML EG +PN +TFL VLSACTH GL+E+GWN F +MKS YQIEP   HYAC
Sbjct: 503 EEALELFHKMLNEGQKPNEITFLGVLSACTHVGLLEQGWNYFKSMKSLYQIEPGPHHYAC 562

Query: 91  MVDLLGRAGRLNQAWEFVMRMPERPNSDVW 2
           +VDLLGRAG L+ A + +  MP  P+S VW
Sbjct: 563 IVDLLGRAGFLDDAIDLIRSMPCEPHSGVW 592


>gb|AAF78430.1|AC018748_9 Contains similarity to glycerine-rich protein from Nicotiana glauca
           gb|AF151215 and contains multiple PPR PF|01535 repeats
           [Arabidopsis thaliana]
          Length = 816

 Score =  182 bits (462), Expect = 2e-44
 Identities = 83/150 (55%), Positives = 110/150 (73%)
 Frame = -3

Query: 451 HTCVLKMNLECDLSIQNSLVSFYAKCGNVIDAYRVFMDVVEPNVISYNSIINGFAQNGFA 272
           H  V+KMN+  DLS+QNSLVS Y KCGN  DAY++F  + EPN++SYN++I+G++ NGF 
Sbjct: 461 HGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCISEPNIVSYNTMISGYSYNGFG 520

Query: 271 EEALRVYKRMLCEGHEPNHVTFLAVLSACTHAGLVEEGWNLFNTMKSRYQIEPEADHYAC 92
           ++AL+++  +   G EPN VTFLA+LSAC H G V+ GW  F +MKS Y IEP  DHYAC
Sbjct: 521 KKALKLFSMLESSGKEPNGVTFLALLSACVHVGYVDLGWKYFKSMKSSYNIEPGPDHYAC 580

Query: 91  MVDLLGRAGRLNQAWEFVMRMPERPNSDVW 2
           MVDLLGR+G L+ A   +  MP +P+S VW
Sbjct: 581 MVDLLGRSGLLDDASNLISTMPCKPHSGVW 610


>gb|AAG51982.1|AC024260_20 hypothetical protein; 70922-66390 [Arabidopsis thaliana]
          Length = 839

 Score =  182 bits (462), Expect = 2e-44
 Identities = 83/150 (55%), Positives = 110/150 (73%)
 Frame = -3

Query: 451 HTCVLKMNLECDLSIQNSLVSFYAKCGNVIDAYRVFMDVVEPNVISYNSIINGFAQNGFA 272
           H  V+KMN+  DLS+QNSLVS Y KCGN  DAY++F  + EPN++SYN++I+G++ NGF 
Sbjct: 461 HGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCISEPNIVSYNTMISGYSYNGFG 520

Query: 271 EEALRVYKRMLCEGHEPNHVTFLAVLSACTHAGLVEEGWNLFNTMKSRYQIEPEADHYAC 92
           ++AL+++  +   G EPN VTFLA+LSAC H G V+ GW  F +MKS Y IEP  DHYAC
Sbjct: 521 KKALKLFSMLESSGKEPNGVTFLALLSACVHVGYVDLGWKYFKSMKSSYNIEPGPDHYAC 580

Query: 91  MVDLLGRAGRLNQAWEFVMRMPERPNSDVW 2
           MVDLLGR+G L+ A   +  MP +P+S VW
Sbjct: 581 MVDLLGRSGLLDDASNLISTMPCKPHSGVW 610


Top