BLASTX nr result

ID: Glycyrrhiza23_contig00015442 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00015442
         (1327 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003548927.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   681   0.0  
ref|XP_003519940.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   672   0.0  
ref|XP_002276467.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   606   e-171
ref|XP_002512794.1| dead box ATP-dependent RNA helicase, putativ...   602   e-170
ref|XP_002320399.1| predicted protein [Populus trichocarpa] gi|2...   595   e-168

>ref|XP_003548927.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 41-like [Glycine max]
          Length = 528

 Score =  681 bits (1758), Expect = 0.0
 Identities = 351/420 (83%), Positives = 372/420 (88%), Gaps = 4/420 (0%)
 Frame = +3

Query: 78   SLSTXXXXXXXXXXXVKLSSKDQREALPGEPKCTICGRYGEYICDETDDDVCSLECKQSL 257
            SL T           VKL S+DQR ALPGEPKC ICGRYGEYICDETDDDVCSLECKQ+L
Sbjct: 12   SLDTDAEAPNDVEDDVKLRSRDQRLALPGEPKCIICGRYGEYICDETDDDVCSLECKQAL 71

Query: 258  LCRIAKSLSSVGVFPPPKKLPAADECFYVRD----TGTTSLGSDQAKLLRKKLDIRVKGD 425
            LCRIAKSLS     PPPK +PAADECFYVRD    +GT S+GSD    LRKKLDIRVKGD
Sbjct: 72   LCRIAKSLS-----PPPKTIPAADECFYVRDSDFKSGTVSMGSD----LRKKLDIRVKGD 122

Query: 426  VVAPVLSFTSCNLPDKLLHNIEAAGYDIPTPVQMQTIPAALMGKNMLVLADTGSGKSASF 605
            VVAPVLSF++CNLPDKLLHNIEAAGY++PTPVQMQ IPAAL GK+MLVLADTGSGKSASF
Sbjct: 123  VVAPVLSFSACNLPDKLLHNIEAAGYEMPTPVQMQAIPAALTGKSMLVLADTGSGKSASF 182

Query: 606  LIPIVSRCASHRLTFVSDKKQPLAMVLTPTRELCIQVEEHAKLLGKGLPFRTALVVGGDA 785
            LIPIVSRC  HR  + S KK+PLAMVLTPTRELCIQVEEHAKLLGKGLPF+TALVVGGDA
Sbjct: 183  LIPIVSRCVIHRRQYFSGKKKPLAMVLTPTRELCIQVEEHAKLLGKGLPFKTALVVGGDA 242

Query: 786  MAGQLYRIQQGVELIVATPGRLVDLLMKHEIDLDDVMTFVVDEVDCMLQRGFRDQVMQIF 965
            MAGQL+RIQQGVELIV TPGRLVDLLMKHEIDLDDVMTFVVDEVDCMLQRGFRDQVMQI+
Sbjct: 243  MAGQLHRIQQGVELIVGTPGRLVDLLMKHEIDLDDVMTFVVDEVDCMLQRGFRDQVMQIY 302

Query: 966  RALSQPQVLMYSATMSNDLEKMANSLAKDTVVISVGEPNRPNKAVKQLAIWVESKQKKQK 1145
            RALSQPQVLMYSATMSNDLEKM N+LAK  VV+S+GEPN PNKAVKQLAIWVESKQKKQK
Sbjct: 303  RALSQPQVLMYSATMSNDLEKMINTLAKGMVVMSIGEPNTPNKAVKQLAIWVESKQKKQK 362

Query: 1146 LFDILTSNKHFKPPVVIYVGSRLGADLLANAITVATGIKAVSIHGEKSMTERREIMHSFM 1325
            LF+IL S KHFKPPVV+YVGSRLGADLLANAITVATGIKAVSIHGEKSM ERRE M SF+
Sbjct: 363  LFEILASKKHFKPPVVVYVGSRLGADLLANAITVATGIKAVSIHGEKSMKERRETMQSFL 422


>ref|XP_003519940.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 41-like [Glycine max]
          Length = 528

 Score =  672 bits (1733), Expect = 0.0
 Identities = 344/420 (81%), Positives = 371/420 (88%), Gaps = 4/420 (0%)
 Frame = +3

Query: 78   SLSTXXXXXXXXXXXVKLSSKDQREALPGEPKCTICGRYGEYICDETDDDVCSLECKQSL 257
            SL+T           VKL S+DQR ALPGEPKC ICGRYGEYICDETDDDVCSLECKQ+L
Sbjct: 12   SLATDTDAPNDAEDEVKLRSRDQRLALPGEPKCIICGRYGEYICDETDDDVCSLECKQAL 71

Query: 258  LCRIAKSLSSVGVFPPPKKLPAADECFYVRD----TGTTSLGSDQAKLLRKKLDIRVKGD 425
            LCRIAKS S     PPPK++PAADECFYV+D    +GT S+ SD    LRKKLDI VKGD
Sbjct: 72   LCRIAKSSS-----PPPKRIPAADECFYVKDADYESGTASMASD----LRKKLDIHVKGD 122

Query: 426  VVAPVLSFTSCNLPDKLLHNIEAAGYDIPTPVQMQTIPAALMGKNMLVLADTGSGKSASF 605
            VVAPVLSF++CNLPDKLLHNIEAAGY++PTPVQMQ IPAAL GK+ML+LADTGSGKSASF
Sbjct: 123  VVAPVLSFSACNLPDKLLHNIEAAGYEMPTPVQMQAIPAALTGKSMLLLADTGSGKSASF 182

Query: 606  LIPIVSRCASHRLTFVSDKKQPLAMVLTPTRELCIQVEEHAKLLGKGLPFRTALVVGGDA 785
            LIPIVSRCA HR  +VSDKK PLA+VLTPTRELC+QVEEHAKLLGKG+PF+TALVVGGDA
Sbjct: 183  LIPIVSRCAIHRRQYVSDKKNPLALVLTPTRELCMQVEEHAKLLGKGMPFKTALVVGGDA 242

Query: 786  MAGQLYRIQQGVELIVATPGRLVDLLMKHEIDLDDVMTFVVDEVDCMLQRGFRDQVMQIF 965
            MAGQL+RIQQGVELIV TPGRLVDLL KHEIDLDDVMTFVVDEVDCMLQRGFRDQVMQI+
Sbjct: 243  MAGQLHRIQQGVELIVGTPGRLVDLLTKHEIDLDDVMTFVVDEVDCMLQRGFRDQVMQIY 302

Query: 966  RALSQPQVLMYSATMSNDLEKMANSLAKDTVVISVGEPNRPNKAVKQLAIWVESKQKKQK 1145
            RALSQPQVLMYSATMSNDLEKM N+L K TVVISVGEPN PNKAVKQLAIWVESK+KKQK
Sbjct: 303  RALSQPQVLMYSATMSNDLEKMINTLVKGTVVISVGEPNTPNKAVKQLAIWVESKEKKQK 362

Query: 1146 LFDILTSNKHFKPPVVIYVGSRLGADLLANAITVATGIKAVSIHGEKSMTERREIMHSFM 1325
            LF+IL S KHFKPPVV+YVGSRLGADLLANAITV+TGIKAVSIHGEKSM ERRE M S +
Sbjct: 363  LFEILESKKHFKPPVVVYVGSRLGADLLANAITVSTGIKAVSIHGEKSMKERRETMQSLL 422


>ref|XP_002276467.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 41-like [Vitis
            vinifera]
          Length = 540

 Score =  606 bits (1563), Expect = e-171
 Identities = 305/406 (75%), Positives = 351/406 (86%), Gaps = 5/406 (1%)
 Frame = +3

Query: 123  VKLSSKDQREALPGEPKCTICGRYGEYICDETDDDVCSLECKQSLLCRIAKSLSSVGVFP 302
            VK    DQREALPGEPKC ICGRYGEYICDETDDD+CSLECKQ+LLCR+AKS   V V P
Sbjct: 27   VKERCWDQREALPGEPKCVICGRYGEYICDETDDDICSLECKQTLLCRVAKSRLPV-VLP 85

Query: 303  PPKKLPAADECFYVRDTG----TTSLGSDQAKLLRKKLDIRVKGDV-VAPVLSFTSCNLP 467
            PPK+LP  DECFYVRD+G    + SL   Q ++LR++L+I V+GD  ++P+LSF+SCNLP
Sbjct: 86   PPKRLPTTDECFYVRDSGDKSGSQSLTGSQTEMLRRRLEICVRGDFDLSPILSFSSCNLP 145

Query: 468  DKLLHNIEAAGYDIPTPVQMQTIPAALMGKNMLVLADTGSGKSASFLIPIVSRCASHRLT 647
             KLL NIEAAGY+IPTPVQMQ IPAAL+GKN+LV ADTGSGK+ASFL+PIVSRC S R  
Sbjct: 146  QKLLQNIEAAGYEIPTPVQMQAIPAALVGKNLLVSADTGSGKTASFLVPIVSRCTSIRPD 205

Query: 648  FVSDKKQPLAMVLTPTRELCIQVEEHAKLLGKGLPFRTALVVGGDAMAGQLYRIQQGVEL 827
               ++K PLAMVLTPTRELC+QVEE AKLLGKGLPF+TALVVGGDAM  QL+RIQQGVEL
Sbjct: 206  HSPNQKNPLAMVLTPTRELCMQVEEQAKLLGKGLPFKTALVVGGDAMPRQLHRIQQGVEL 265

Query: 828  IVATPGRLVDLLMKHEIDLDDVMTFVVDEVDCMLQRGFRDQVMQIFRALSQPQVLMYSAT 1007
            IV TPGRL+DLL KHEI+LDDV   V+DEVDCML+RGFRDQVMQI+RALSQPQVLMYSAT
Sbjct: 266  IVGTPGRLIDLLSKHEIELDDVFMLVLDEVDCMLERGFRDQVMQIYRALSQPQVLMYSAT 325

Query: 1008 MSNDLEKMANSLAKDTVVISVGEPNRPNKAVKQLAIWVESKQKKQKLFDILTSNKHFKPP 1187
            +S ++EK+A+S+AKD +VISVG+ NRPN AVKQLAIWVESKQKKQKLFDILTS +HF PP
Sbjct: 326  ISQEVEKVASSMAKDIIVISVGKSNRPNIAVKQLAIWVESKQKKQKLFDILTSKQHFTPP 385

Query: 1188 VVIYVGSRLGADLLANAITVATGIKAVSIHGEKSMTERREIMHSFM 1325
            VV++VGSRLGADLL  AIT+ TG+KA+SIHGEKSM ERREIM SF+
Sbjct: 386  VVVFVGSRLGADLLTEAITITTGLKALSIHGEKSMKERREIMSSFL 431


>ref|XP_002512794.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
            gi|223547805|gb|EEF49297.1| dead box ATP-dependent RNA
            helicase, putative [Ricinus communis]
          Length = 514

 Score =  602 bits (1552), Expect = e-170
 Identities = 297/402 (73%), Positives = 353/402 (87%), Gaps = 1/402 (0%)
 Frame = +3

Query: 123  VKLSSKDQREALPGEPKCTICGRYGEYICDETDDDVCSLECKQSLLCRIAKSLSSVGVFP 302
            VK +S++QREAL GEPKC +CGRYGEYICDETDDD+CSLECKQ LL  + KS  SVG+ P
Sbjct: 14   VKKTSREQREALQGEPKCVLCGRYGEYICDETDDDICSLECKQILLGGVGKSDISVGI-P 72

Query: 303  PPKKLPAADECFYVRDTGTTSLGSDQAKLLRKKLDIRVKGDVVA-PVLSFTSCNLPDKLL 479
            PP++L A DECFYVR+ GT+SL +DQ +LLR+ L+I VKG++V  P+LSF+SCNLP KLL
Sbjct: 73   PPRRLAATDECFYVRENGTSSLTNDQTELLRRTLEIHVKGELVPDPILSFSSCNLPQKLL 132

Query: 480  HNIEAAGYDIPTPVQMQTIPAALMGKNMLVLADTGSGKSASFLIPIVSRCASHRLTFVSD 659
             N+EAAGYD+PTPVQMQ IP AL GK++L  ADTGSGK+AS+L+PI+S CAS+RL   SD
Sbjct: 133  LNLEAAGYDLPTPVQMQAIPTALSGKSLLASADTGSGKTASYLVPIISSCASYRLQHSSD 192

Query: 660  KKQPLAMVLTPTRELCIQVEEHAKLLGKGLPFRTALVVGGDAMAGQLYRIQQGVELIVAT 839
            +K PLAMVLTPTRELCIQVE+ AKL GKGLPF+TALVVGGDAMAGQLYRIQQGVELIV T
Sbjct: 193  RK-PLAMVLTPTRELCIQVEDQAKLFGKGLPFKTALVVGGDAMAGQLYRIQQGVELIVGT 251

Query: 840  PGRLVDLLMKHEIDLDDVMTFVVDEVDCMLQRGFRDQVMQIFRALSQPQVLMYSATMSND 1019
            PGRL+DLL KH+I+LD+++ FV+DEVDCMLQRGFRDQVMQIF ALSQPQVL+YSAT++ +
Sbjct: 252  PGRLIDLLTKHDIELDNMIIFVIDEVDCMLQRGFRDQVMQIFWALSQPQVLLYSATVTQE 311

Query: 1020 LEKMANSLAKDTVVISVGEPNRPNKAVKQLAIWVESKQKKQKLFDILTSNKHFKPPVVIY 1199
            +EKMA+S+AKD  ++S+G+PNRP+KAVKQLAIWVE KQKKQKLFDIL S +HF PP V+Y
Sbjct: 312  VEKMASSMAKDMALVSIGQPNRPSKAVKQLAIWVEPKQKKQKLFDILMSKQHFMPPAVVY 371

Query: 1200 VGSRLGADLLANAITVATGIKAVSIHGEKSMTERREIMHSFM 1325
            VGSRLGADLL+NAITV TG K++SIHGEKSM ERREIM SF+
Sbjct: 372  VGSRLGADLLSNAITVTTGWKSLSIHGEKSMKERREIMKSFL 413


>ref|XP_002320399.1| predicted protein [Populus trichocarpa] gi|222861172|gb|EEE98714.1|
            predicted protein [Populus trichocarpa]
          Length = 524

 Score =  595 bits (1535), Expect = e-168
 Identities = 296/402 (73%), Positives = 348/402 (86%), Gaps = 1/402 (0%)
 Frame = +3

Query: 123  VKLSSKDQREALPGEPKCTICGRYGEYICDETDDDVCSLECKQSLLCRIAKSLSSVGVFP 302
            VK +S+DQREALPGEP C +CGRYGEYICD+TD D+CSLECKQ+LL R A +   VG  P
Sbjct: 19   VKKTSRDQREALPGEPICVVCGRYGEYICDQTDSDICSLECKQTLLGRAADTHLPVG-HP 77

Query: 303  PPKKLPAADECFYVRDTGTTSLGSDQAKLLRKKLDIRVKGDVVA-PVLSFTSCNLPDKLL 479
             PK+L A DECFYVRD+  + L SDQ +LLR+KL+I VKGD V  P+LSF+SCNLP+KLL
Sbjct: 78   LPKRLAATDECFYVRDS-ESPLTSDQTELLRRKLEIHVKGDSVPDPILSFSSCNLPEKLL 136

Query: 480  HNIEAAGYDIPTPVQMQTIPAALMGKNMLVLADTGSGKSASFLIPIVSRCASHRLTFVSD 659
            HNI+  GYD+PTP+QMQ I AAL GK++L  ADTGSGK+ASFL+P+VSRCA+ R   +S 
Sbjct: 137  HNIQTLGYDMPTPIQMQGIAAALTGKSLLASADTGSGKTASFLVPVVSRCATFRHGNISK 196

Query: 660  KKQPLAMVLTPTRELCIQVEEHAKLLGKGLPFRTALVVGGDAMAGQLYRIQQGVELIVAT 839
             K+PLAMVLTPTRELCIQVEE AKLLGKGLPF+TALV+GGDAM  QLYRIQQGVELIV T
Sbjct: 197  SKKPLAMVLTPTRELCIQVEEQAKLLGKGLPFKTALVIGGDAMPRQLYRIQQGVELIVGT 256

Query: 840  PGRLVDLLMKHEIDLDDVMTFVVDEVDCMLQRGFRDQVMQIFRALSQPQVLMYSATMSND 1019
            PGRL+DLL KH+I+LDD+M  V+DEVDCMLQ+GFRDQVMQIFRALSQPQVLMYSATMS +
Sbjct: 257  PGRLIDLLAKHDIELDDIMILVLDEVDCMLQQGFRDQVMQIFRALSQPQVLMYSATMSQE 316

Query: 1020 LEKMANSLAKDTVVISVGEPNRPNKAVKQLAIWVESKQKKQKLFDILTSNKHFKPPVVIY 1199
            +EKMA+S+AKD + +S+G+PNRP+KAVKQLAIWVESKQKKQKLFDIL S +HF PP ++Y
Sbjct: 317  VEKMASSMAKDLIFVSIGQPNRPSKAVKQLAIWVESKQKKQKLFDILMSKQHFLPPSIVY 376

Query: 1200 VGSRLGADLLANAITVATGIKAVSIHGEKSMTERREIMHSFM 1325
            VGSR+GADLL+NAITV TG+KA+SIHGEKSM ERREIM SF+
Sbjct: 377  VGSRIGADLLSNAITVTTGLKALSIHGEKSMKERREIMKSFL 418


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