BLASTX nr result

ID: Glycyrrhiza23_contig00015440 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00015440
         (586 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631193.1| PREDICTED: uncharacterized protein LOC100247...    79   7e-13
gb|AAC79140.1| human Mi-2 autoantigen-like protein [Arabidopsis ...    74   2e-11
ref|NP_199293.3| chromatin remodeling 4 protein [Arabidopsis tha...    74   2e-11
ref|XP_002513330.1| conserved hypothetical protein [Ricinus comm...    73   3e-11
ref|XP_002523656.1| chromodomain helicase DNA binding protein, p...    73   3e-11

>ref|XP_003631193.1| PREDICTED: uncharacterized protein LOC100247555 [Vitis vinifera]
          Length = 2355

 Score = 78.6 bits (192), Expect = 7e-13
 Identities = 31/66 (46%), Positives = 46/66 (69%), Gaps = 3/66 (4%)
 Frame = -1

Query: 343 GHDGRYFVCELCN-DGELIRCETCPRIYHIECLD--LKSVPTKEWQCPKCCSNEELSEPI 173
           G+DG YF C +C+  G L+ C++CPR YH++CL+  LK +P  +WQCPKCC   +  EP+
Sbjct: 70  GNDGYYFECVICDLGGNLLCCDSCPRTYHLQCLNPPLKRIPNGKWQCPKCCQKSDSLEPM 129

Query: 172 KHLKNL 155
            HL ++
Sbjct: 130 SHLDSI 135


>gb|AAC79140.1| human Mi-2 autoantigen-like protein [Arabidopsis thaliana]
           gi|9758384|dbj|BAB08833.1| helicase-like protein
           [Arabidopsis thaliana]
          Length = 2228

 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 32/74 (43%), Positives = 45/74 (60%), Gaps = 3/74 (4%)
 Frame = -1

Query: 376 SVPRTDGSHEIGHDGRYFVCELCN-DGELIRCETCPRIYHIECLD--LKSVPTKEWQCPK 206
           S P  + S   G+DG YF C +C+  G+L+ C++CPR YH  CL+  LK +P  +W CPK
Sbjct: 45  STPERNSSKRKGNDGNYFECVICDLGGDLLCCDSCPRTYHTACLNPPLKRIPNGKWICPK 104

Query: 205 CCSNEELSEPIKHL 164
           C  N E  +P+  L
Sbjct: 105 CSPNSEALKPVNRL 118


>ref|NP_199293.3| chromatin remodeling 4 protein [Arabidopsis thaliana]
           gi|332007781|gb|AED95164.1| chromatin remodeling 4
           protein [Arabidopsis thaliana]
          Length = 2223

 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 32/74 (43%), Positives = 45/74 (60%), Gaps = 3/74 (4%)
 Frame = -1

Query: 376 SVPRTDGSHEIGHDGRYFVCELCN-DGELIRCETCPRIYHIECLD--LKSVPTKEWQCPK 206
           S P  + S   G+DG YF C +C+  G+L+ C++CPR YH  CL+  LK +P  +W CPK
Sbjct: 59  STPERNSSKRKGNDGNYFECVICDLGGDLLCCDSCPRTYHTACLNPPLKRIPNGKWICPK 118

Query: 205 CCSNEELSEPIKHL 164
           C  N E  +P+  L
Sbjct: 119 CSPNSEALKPVNRL 132


>ref|XP_002513330.1| conserved hypothetical protein [Ricinus communis]
           gi|223547238|gb|EEF48733.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 602

 Score = 73.2 bits (178), Expect = 3e-11
 Identities = 31/67 (46%), Positives = 44/67 (65%), Gaps = 3/67 (4%)
 Frame = -1

Query: 346 IGHDGRYFVCELC-NDGELIRCETCPRIYHIECLD--LKSVPTKEWQCPKCCSNEELSEP 176
           IG DG Y+ C +C N G+L+ C+TCP  YH++CL   L+ VP+  WQC  CC   +L  P
Sbjct: 55  IGDDGHYYECVICDNGGDLLCCDTCPGTYHLQCLTPPLELVPSGNWQCENCCQAADLLTP 114

Query: 175 IKHLKNL 155
           +K+L+ L
Sbjct: 115 LKYLEGL 121


>ref|XP_002523656.1| chromodomain helicase DNA binding protein, putative [Ricinus
           communis] gi|223537108|gb|EEF38742.1| chromodomain
           helicase DNA binding protein, putative [Ricinus
           communis]
          Length = 2257

 Score = 73.2 bits (178), Expect = 3e-11
 Identities = 32/71 (45%), Positives = 49/71 (69%), Gaps = 3/71 (4%)
 Frame = -1

Query: 355 SHEIGHDGRYFVCELCN-DGELIRCETCPRIYHIECLD--LKSVPTKEWQCPKCCSNEEL 185
           S + G+DG Y+ C +C+  G L+ C++CPR+YH++CLD  LK +P  +WQCPKC    + 
Sbjct: 66  SKKKGNDGYYYECVICDLGGNLLCCDSCPRVYHLQCLDPPLKRIPMGKWQCPKC---YQK 122

Query: 184 SEPIKHLKNLD 152
           S+P+K +  LD
Sbjct: 123 SDPLKSITQLD 133


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