BLASTX nr result

ID: Glycyrrhiza23_contig00015427 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00015427
         (354 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003519207.1| PREDICTED: rhamnogalacturonate lyase B-like ...   182   2e-44
ref|XP_003615341.1| LG27/30-like gene [Medicago truncatula] gi|3...   171   7e-41
ref|XP_002301114.1| predicted protein [Populus trichocarpa] gi|2...   160   1e-37
ref|XP_002527357.1| lyase, putative [Ricinus communis] gi|223533...   157   8e-37
ref|XP_002527353.1| lyase, putative [Ricinus communis] gi|223533...   150   1e-34

>ref|XP_003519207.1| PREDICTED: rhamnogalacturonate lyase B-like [Glycine max]
          Length = 651

 Score =  182 bits (462), Expect = 2e-44
 Identities = 86/104 (82%), Positives = 96/104 (92%)
 Frame = +1

Query: 43  MCSQAVQLHIKDNYVVMDNGILQVYISNPGGFVTRIQYNGIQNLLEFLSERNNRGYWDVV 222
           M SQAVQL ++D+ VVMDNGILQVY+SNPGGFVT IQYNGI NLLE L+E++NRGYWDVV
Sbjct: 1   MASQAVQLRVEDSQVVMDNGILQVYLSNPGGFVTGIQYNGIDNLLETLNEKDNRGYWDVV 60

Query: 223 WSEAGSTGTTGTFERFVGTSFHVIVENEEQVEVSFTRTWDPSLK 354
           WSEAGSTGTTGTFER VGTSF+VI+ENEEQVE+SFTR WDPSLK
Sbjct: 61  WSEAGSTGTTGTFERIVGTSFNVIMENEEQVEISFTRKWDPSLK 104


>ref|XP_003615341.1| LG27/30-like gene [Medicago truncatula] gi|355516676|gb|AES98299.1|
           LG27/30-like gene [Medicago truncatula]
          Length = 661

 Score =  171 bits (432), Expect = 7e-41
 Identities = 86/121 (71%), Positives = 95/121 (78%), Gaps = 17/121 (14%)
 Frame = +1

Query: 43  MCSQAVQLHIKDNYVVMDNGILQVYISNPGGFVTRIQYNGIQNLLEFLSERNNRG----- 207
           M SQAVQL IK N+VVMDNGI+QVY+SNPGGFVTRIQYNGI NLLE L+E+NNRG     
Sbjct: 1   MSSQAVQLRIKSNHVVMDNGIVQVYLSNPGGFVTRIQYNGIDNLLEALNEKNNRGYITTN 60

Query: 208 ------------YWDVVWSEAGSTGTTGTFERFVGTSFHVIVENEEQVEVSFTRTWDPSL 351
                       YWDVVWSE GSTGTTGTFER VGTSF+VI+E EEQVE+SF RTW+PSL
Sbjct: 61  KLRLISLFPLIMYWDVVWSEYGSTGTTGTFERIVGTSFNVIMETEEQVEISFKRTWNPSL 120

Query: 352 K 354
           K
Sbjct: 121 K 121


>ref|XP_002301114.1| predicted protein [Populus trichocarpa] gi|222842840|gb|EEE80387.1|
           predicted protein [Populus trichocarpa]
          Length = 640

 Score =  160 bits (404), Expect = 1e-37
 Identities = 77/104 (74%), Positives = 87/104 (83%)
 Frame = +1

Query: 43  MCSQAVQLHIKDNYVVMDNGILQVYISNPGGFVTRIQYNGIQNLLEFLSERNNRGYWDVV 222
           M +  VQL I+D +VVMDNGILQV +SNPGG VT IQYNGI NLLE L    NRGYWD+V
Sbjct: 1   MSTPRVQLLIEDQHVVMDNGILQVTLSNPGGIVTGIQYNGIDNLLEALDLETNRGYWDLV 60

Query: 223 WSEAGSTGTTGTFERFVGTSFHVIVENEEQVEVSFTRTWDPSLK 354
           WS+AGSTGTTGTF+ F GT+F VIVENEEQVE+SFTRTWDPSL+
Sbjct: 61  WSQAGSTGTTGTFDVFEGTTFRVIVENEEQVEISFTRTWDPSLE 104


>ref|XP_002527357.1| lyase, putative [Ricinus communis] gi|223533276|gb|EEF35029.1|
           lyase, putative [Ricinus communis]
          Length = 639

 Score =  157 bits (397), Expect = 8e-37
 Identities = 72/104 (69%), Positives = 87/104 (83%)
 Frame = +1

Query: 43  MCSQAVQLHIKDNYVVMDNGILQVYISNPGGFVTRIQYNGIQNLLEFLSERNNRGYWDVV 222
           M +  V LHI+D++VV+DNGILQV +SNPGG VT ++YN + NLLE L +  NRGYWD+V
Sbjct: 1   MSTPGVHLHIEDHHVVLDNGILQVTLSNPGGIVTGVRYNNVDNLLEVLDDEVNRGYWDLV 60

Query: 223 WSEAGSTGTTGTFERFVGTSFHVIVENEEQVEVSFTRTWDPSLK 354
           WS AGSTGTTGTF+ F GTSF VIVENE+QVE+SFTRTWDPSL+
Sbjct: 61  WSAAGSTGTTGTFDVFEGTSFRVIVENEDQVEISFTRTWDPSLE 104


>ref|XP_002527353.1| lyase, putative [Ricinus communis] gi|223533272|gb|EEF35025.1|
           lyase, putative [Ricinus communis]
          Length = 642

 Score =  150 bits (378), Expect = 1e-34
 Identities = 71/101 (70%), Positives = 85/101 (84%)
 Frame = +1

Query: 52  QAVQLHIKDNYVVMDNGILQVYISNPGGFVTRIQYNGIQNLLEFLSERNNRGYWDVVWSE 231
           Q VQL+I+DN+V++DNGILQV +SNP G VT IQYNGI NLLE L++ +NRGYWD+VWS 
Sbjct: 4   QGVQLNIQDNHVMLDNGILQVTLSNPEGIVTGIQYNGIGNLLEVLNDESNRGYWDLVWST 63

Query: 232 AGSTGTTGTFERFVGTSFHVIVENEEQVEVSFTRTWDPSLK 354
            GSTGTTG F+   GTSF VIVE EEQVE+SFTR+WDPSL+
Sbjct: 64  PGSTGTTGIFDVIKGTSFKVIVETEEQVELSFTRSWDPSLE 104


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