BLASTX nr result

ID: Glycyrrhiza23_contig00015411 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00015411
         (2016 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003517954.1| PREDICTED: F-box/kelch-repeat protein SKIP11...   864   0.0  
ref|XP_003518718.1| PREDICTED: F-box/kelch-repeat protein SKIP11...   862   0.0  
ref|XP_003613674.1| F-box/kelch-repeat protein SKIP11 [Medicago ...   817   0.0  
ref|XP_003532056.1| PREDICTED: F-box/kelch-repeat protein SKIP11...   810   0.0  
ref|XP_003551972.1| PREDICTED: F-box/kelch-repeat protein SKIP11...   782   0.0  

>ref|XP_003517954.1| PREDICTED: F-box/kelch-repeat protein SKIP11-like isoform 1 [Glycine
            max] gi|356498228|ref|XP_003517955.1| PREDICTED:
            F-box/kelch-repeat protein SKIP11-like isoform 2 [Glycine
            max]
          Length = 537

 Score =  864 bits (2233), Expect = 0.0
 Identities = 436/541 (80%), Positives = 462/541 (85%), Gaps = 8/541 (1%)
 Frame = +1

Query: 1    MLDGRSCVVPRLFCSSCQAENDWSYMKYLLDLDIKNGKRPMEIDDDAEDEP-KPRKCTKI 177
            MLDGRSCVVPR+F  +CQAENDWSYMK LL+LDIKNGKRPMEIDD  EDEP +PRKCTK 
Sbjct: 1    MLDGRSCVVPRMFSGTCQAENDWSYMKCLLELDIKNGKRPMEIDDVEEDEPHQPRKCTKK 60

Query: 178  FDSFHMVETVQISFQQQSLQAEDSVVVPQMDQQTIEPLSICQGGQEEAGACNDVQLLAEQ 357
             DS H VE  +ISFQ+QS++A+DSVV P MDQ+TIEPLS+CQG  EE GA  D QLL E+
Sbjct: 61   LDSCHRVEMARISFQRQSIEAKDSVV-PPMDQETIEPLSVCQGVVEEDGALTD-QLLDEK 118

Query: 358  EKQLGGDSMECGDKQ-------QHGDSSDSGIQPSDEPQLQHAXXXXXXXXXXXXXXXXX 516
            E+++ G  M+ GD Q       Q GDSSD G Q SDE QLQH                  
Sbjct: 119  EQEVDGYLMDFGDHQSDKQQQAQTGDSSDFGAQLSDEDQLQH--DDENLLNSSEQQSEGQ 176

Query: 517  XXXXXXXXXDSGSLLPRMNRDSSIACLSRCSRSDYGSLASLNRSFRNIIRSGELYTWRRL 696
                     DS SLLPRMNRDSSIACLSRCSRSDYGSLASLNRSF NIIRSGELY WRRL
Sbjct: 177  QQHHGGDSSDSSSLLPRMNRDSSIACLSRCSRSDYGSLASLNRSFWNIIRSGELYQWRRL 236

Query: 697  NGIMEHWVYFSCALLEWEAYDPIRQRWMHLPRMASNECFMCSDKESLAVGTELLVFGREL 876
            NGIMEHW+YFSCALLEWEAYDPIRQRWMHLPRMASNECFMCSDKESLAVGTELLVFGREL
Sbjct: 237  NGIMEHWIYFSCALLEWEAYDPIRQRWMHLPRMASNECFMCSDKESLAVGTELLVFGREL 296

Query: 877  RSHVIYRYSLLTNSWSSGMRMNAPRCLFGSASLGEIAILAGGCDSEGRILDSAELYNSET 1056
            RSHV YRYSLLTNSW+SG RMNAPRCLFGSASLGEIAILAGGCDSEG ILDSAELYNSET
Sbjct: 297  RSHVTYRYSLLTNSWTSGTRMNAPRCLFGSASLGEIAILAGGCDSEGHILDSAELYNSET 356

Query: 1057 QTFEMLPRMKKPRKMCSGVFMDGKFYVIGGIGGSDSKLLMCGEEYNLQTRTWTEIPNMSP 1236
            QT+E LP MKKPRKMCSGVFMDGKFYVIGGIGG DSKLL CGEEYNLQTRTWTEIP+MSP
Sbjct: 357  QTWETLPCMKKPRKMCSGVFMDGKFYVIGGIGGCDSKLLTCGEEYNLQTRTWTEIPSMSP 416

Query: 1237 GRSTRGSEMPATAEAPPLVAVVDNELYAADYADMEVKKYDKERKAWFTIGRLPERAVSMN 1416
            GRS+RG EMPATAEAPPLVAVV++ELYAADYADMEVKKYDKERK W TIGRLPERAVSMN
Sbjct: 417  GRSSRGPEMPATAEAPPLVAVVNDELYAADYADMEVKKYDKERKVWLTIGRLPERAVSMN 476

Query: 1417 GWGLAFRACGNRLIVIGGPRTHGEGFIELNSWVPSEGPPQWRLLARKRSGNFVYNCAVMG 1596
            GWGLAFRACG++LIVIGGPRTHGEGFIELNSWVPSEGPP+W LLARKRSGNFVYNCAVMG
Sbjct: 477  GWGLAFRACGDKLIVIGGPRTHGEGFIELNSWVPSEGPPRWDLLARKRSGNFVYNCAVMG 536

Query: 1597 C 1599
            C
Sbjct: 537  C 537


>ref|XP_003518718.1| PREDICTED: F-box/kelch-repeat protein SKIP11-like [Glycine max]
          Length = 539

 Score =  862 bits (2228), Expect = 0.0
 Identities = 432/541 (79%), Positives = 459/541 (84%), Gaps = 8/541 (1%)
 Frame = +1

Query: 1    MLDGRSCVVPRLFCSSCQAENDWSYMKYLLDLDIKNGKRPMEIDDDAEDEP-KPRKCTKI 177
            MLDGRSCVVPRLF  +CQAEN+WSYMK LL+LDIKNGKRPM IDD  EDEP +PRKCTK 
Sbjct: 1    MLDGRSCVVPRLFSGTCQAENEWSYMKCLLELDIKNGKRPMGIDDVEEDEPHQPRKCTKK 60

Query: 178  FDSFHMVETVQISFQQQSLQAEDSVVVPQMDQQTIEPLSICQGGQEEAGACNDVQLLAEQ 357
             DS H VE  +ISFQ+QS++A+DSVVVP +DQ+TIEPLS+CQG   E GA  D +LL E+
Sbjct: 61   LDSCHRVEMARISFQRQSIEAKDSVVVPPLDQETIEPLSVCQGVVGEEGALTD-RLLCEK 119

Query: 358  EKQLGGDSMECGDKQ-------QHGDSSDSGIQPSDEPQLQHAXXXXXXXXXXXXXXXXX 516
            E +  GD M+ GD Q       Q GD SD G++  DE QLQH                  
Sbjct: 120  EHEGDGDLMDFGDHQSDKQQQAQPGDLSDFGVRLFDEDQLQH-DDNLLNLSEQQSEGRQQ 178

Query: 517  XXXXXXXXXDSGSLLPRMNRDSSIACLSRCSRSDYGSLASLNRSFRNIIRSGELYTWRRL 696
                     DS SLLPRMNRDSSI CLSRCSRSDYGSLASLNRSFRNIIRSGELY WRRL
Sbjct: 179  QHHHGGDSSDSSSLLPRMNRDSSITCLSRCSRSDYGSLASLNRSFRNIIRSGELYQWRRL 238

Query: 697  NGIMEHWVYFSCALLEWEAYDPIRQRWMHLPRMASNECFMCSDKESLAVGTELLVFGREL 876
            NGIMEHW+YFSCALLEWEAYDPIRQRWMHLPRMASNECFMCSDKESLA GTELLVFGREL
Sbjct: 239  NGIMEHWIYFSCALLEWEAYDPIRQRWMHLPRMASNECFMCSDKESLAAGTELLVFGREL 298

Query: 877  RSHVIYRYSLLTNSWSSGMRMNAPRCLFGSASLGEIAILAGGCDSEGRILDSAELYNSET 1056
            RSHV YRYSLLTNSW+SG RMNAPRCLFGSASLGEIAILAGGCDSEG ILDSAELYNSET
Sbjct: 299  RSHVTYRYSLLTNSWTSGTRMNAPRCLFGSASLGEIAILAGGCDSEGHILDSAELYNSET 358

Query: 1057 QTFEMLPRMKKPRKMCSGVFMDGKFYVIGGIGGSDSKLLMCGEEYNLQTRTWTEIPNMSP 1236
            QT+E LPRMKKPRKM SGVFMDGKFYVIGGIGGSDSKLL CGEEYNLQTRTWTEIPNMSP
Sbjct: 359  QTWETLPRMKKPRKMSSGVFMDGKFYVIGGIGGSDSKLLTCGEEYNLQTRTWTEIPNMSP 418

Query: 1237 GRSTRGSEMPATAEAPPLVAVVDNELYAADYADMEVKKYDKERKAWFTIGRLPERAVSMN 1416
            GRS+RG EMPATAEAPPLVAVV++ELYAADYADMEVKKYDKER  WFTIGRLPERAVSMN
Sbjct: 419  GRSSRGPEMPATAEAPPLVAVVNDELYAADYADMEVKKYDKERNVWFTIGRLPERAVSMN 478

Query: 1417 GWGLAFRACGNRLIVIGGPRTHGEGFIELNSWVPSEGPPQWRLLARKRSGNFVYNCAVMG 1596
            GWGLAFRACG++LIVIGGPRTHGEGFIELNSWVPSEGPP+W LLARKRSGNFVYNCAVMG
Sbjct: 479  GWGLAFRACGDKLIVIGGPRTHGEGFIELNSWVPSEGPPRWDLLARKRSGNFVYNCAVMG 538

Query: 1597 C 1599
            C
Sbjct: 539  C 539


>ref|XP_003613674.1| F-box/kelch-repeat protein SKIP11 [Medicago truncatula]
            gi|355515009|gb|AES96632.1| F-box/kelch-repeat protein
            SKIP11 [Medicago truncatula]
          Length = 480

 Score =  817 bits (2110), Expect = 0.0
 Identities = 411/532 (77%), Positives = 437/532 (82%)
 Frame = +1

Query: 4    LDGRSCVVPRLFCSSCQAENDWSYMKYLLDLDIKNGKRPMEIDDDAEDEPKPRKCTKIFD 183
            L GR CVV RLFCS+C+ ENDWSYMKY+LDLDIKNGKRPM+ID  AEDE  PRKCTK+ +
Sbjct: 6    LFGRCCVVSRLFCSTCETENDWSYMKYMLDLDIKNGKRPMKIDS-AEDEHHPRKCTKMLE 64

Query: 184  SFHMVETVQISFQQQSLQAEDSVVVPQMDQQTIEPLSICQGGQEEAGACNDVQLLAEQEK 363
            S H+VETV IS     LQ     V+P+ DQ+  EPL++CQG  +                
Sbjct: 65   SCHIVETVCIS-----LQHPKDAVLPETDQKINEPLNVCQGVHD---------------- 103

Query: 364  QLGGDSMECGDKQQHGDSSDSGIQPSDEPQLQHAXXXXXXXXXXXXXXXXXXXXXXXXXX 543
              GGDS+         DSSDSGIQ SDE Q  HA                          
Sbjct: 104  --GGDSI---------DSSDSGIQQSDEEQ--HAGDSS---------------------- 128

Query: 544  DSGSLLPRMNRDSSIACLSRCSRSDYGSLASLNRSFRNIIRSGELYTWRRLNGIMEHWVY 723
            DSGSLLPRMNRDSSI CLSRCSRSDYGSLASLNRSFR IIR+GE+Y WRRLNGIMEHWVY
Sbjct: 129  DSGSLLPRMNRDSSIVCLSRCSRSDYGSLASLNRSFREIIRNGEVYRWRRLNGIMEHWVY 188

Query: 724  FSCALLEWEAYDPIRQRWMHLPRMASNECFMCSDKESLAVGTELLVFGRELRSHVIYRYS 903
            FSCALLEWEAYDPIRQRWMHLPRMASN+CFMCSDKESLAVGTELLVFGRELRSHVIYRYS
Sbjct: 189  FSCALLEWEAYDPIRQRWMHLPRMASNDCFMCSDKESLAVGTELLVFGRELRSHVIYRYS 248

Query: 904  LLTNSWSSGMRMNAPRCLFGSASLGEIAILAGGCDSEGRILDSAELYNSETQTFEMLPRM 1083
            LLTNSWSSGMRMNAPRCLFGSASLGEIAILAGGCDSEGRILDSAELYNSETQTFE+LP M
Sbjct: 249  LLTNSWSSGMRMNAPRCLFGSASLGEIAILAGGCDSEGRILDSAELYNSETQTFELLPSM 308

Query: 1084 KKPRKMCSGVFMDGKFYVIGGIGGSDSKLLMCGEEYNLQTRTWTEIPNMSPGRSTRGSEM 1263
             KPRKMCSGVFMDGKFYV+GGIGG DSKLL CGEEYNLQTRTWT+IP+MSPGRS+RGSEM
Sbjct: 309  NKPRKMCSGVFMDGKFYVVGGIGGRDSKLLTCGEEYNLQTRTWTDIPDMSPGRSSRGSEM 368

Query: 1264 PATAEAPPLVAVVDNELYAADYADMEVKKYDKERKAWFTIGRLPERAVSMNGWGLAFRAC 1443
            PA  EAPPL+AVVDNELYAADYADMEVK+YDKERK W T+GRLPERA+SMNGWGLAFRAC
Sbjct: 369  PAATEAPPLIAVVDNELYAADYADMEVKRYDKERKLWITVGRLPERAMSMNGWGLAFRAC 428

Query: 1444 GNRLIVIGGPRTHGEGFIELNSWVPSEGPPQWRLLARKRSGNFVYNCAVMGC 1599
            GN LIVIGGPRTHGEGFIELNSWVPSEGPPQWRLLARKRSGNFVYNCAVMGC
Sbjct: 429  GNMLIVIGGPRTHGEGFIELNSWVPSEGPPQWRLLARKRSGNFVYNCAVMGC 480


>ref|XP_003532056.1| PREDICTED: F-box/kelch-repeat protein SKIP11-like [Glycine max]
          Length = 539

 Score =  810 bits (2091), Expect = 0.0
 Identities = 405/542 (74%), Positives = 440/542 (81%), Gaps = 9/542 (1%)
 Frame = +1

Query: 1    MLDGRSCVVPRLFCSSCQAENDWSYMKYLLDLDIKNGKRPMEIDDDAEDEPKPRKCTKIF 180
            ML+GRSCVVPRLF SSCQA+N WS+M YL DLDIKNGKRP+  D D E+EP+PRK  +  
Sbjct: 1    MLEGRSCVVPRLFPSSCQADNKWSFMTYLPDLDIKNGKRPL--DTDGEEEPQPRKVNRRV 58

Query: 181  DSFHMVETVQISFQQQSLQAEDSVVVPQMDQQTIEPLSICQGGQE-EAGACNDVQLLAEQ 357
            DS H  ET +  FQ+QS  A+DSVV PQMDQ   +   +    Q  E       QLL E+
Sbjct: 59   DSRHHGETTRFLFQKQSCHADDSVV-PQMDQDRRKDCVLLSNWQRVEKADAFSAQLLDER 117

Query: 358  EKQLGGDSMECG--------DKQQHGDSSDSGIQPSDEPQLQHAXXXXXXXXXXXXXXXX 513
            E+   GDS+           ++ Q  DSSDSG+Q SDE +++                  
Sbjct: 118  EQHRAGDSLVVSTDLQSNKKEEDQLEDSSDSGVQQSDEQKMEQEVEGDLLDAGDQQPPDD 177

Query: 514  XXXXXXXXXXDSGSLLPRMNRDSSIACLSRCSRSDYGSLASLNRSFRNIIRSGELYTWRR 693
                      DSGSLLPRMNRDSSIACLSRCSRSDYGSLASLNRSFRN IRSGELY WRR
Sbjct: 178  QEEHHGGDSSDSGSLLPRMNRDSSIACLSRCSRSDYGSLASLNRSFRNTIRSGELYRWRR 237

Query: 694  LNGIMEHWVYFSCALLEWEAYDPIRQRWMHLPRMASNECFMCSDKESLAVGTELLVFGRE 873
            LNGI+EHW+YFSCALLEWEAYDPIR+RWMHLPRMASNECFMCSDKESLAVGTELLVFGRE
Sbjct: 238  LNGIIEHWIYFSCALLEWEAYDPIRERWMHLPRMASNECFMCSDKESLAVGTELLVFGRE 297

Query: 874  LRSHVIYRYSLLTNSWSSGMRMNAPRCLFGSASLGEIAILAGGCDSEGRILDSAELYNSE 1053
            +RSHVIYRYSLLTNSW+SGMRMNAPRCLFGSASLGEIAILAGGCD +G ILDSAELYNSE
Sbjct: 298  MRSHVIYRYSLLTNSWTSGMRMNAPRCLFGSASLGEIAILAGGCDLDGHILDSAELYNSE 357

Query: 1054 TQTFEMLPRMKKPRKMCSGVFMDGKFYVIGGIGGSDSKLLMCGEEYNLQTRTWTEIPNMS 1233
             QT+E+LP M KPRKMCSGVFMDGKFYVIGGIGG DSKLL CGEEYN+QTRTWTEIPNMS
Sbjct: 358  NQTWELLPSMNKPRKMCSGVFMDGKFYVIGGIGGKDSKLLTCGEEYNIQTRTWTEIPNMS 417

Query: 1234 PGRSTRGSEMPATAEAPPLVAVVDNELYAADYADMEVKKYDKERKAWFTIGRLPERAVSM 1413
            PGRS RG+EMPATAEAPPLVAVV++ELYAADYADMEVKKYDKER+ W TIGRLPERAVSM
Sbjct: 418  PGRSARGAEMPATAEAPPLVAVVNDELYAADYADMEVKKYDKERRVWVTIGRLPERAVSM 477

Query: 1414 NGWGLAFRACGNRLIVIGGPRTHGEGFIELNSWVPSEGPPQWRLLARKRSGNFVYNCAVM 1593
            NGWGLAFRACG+ LIVIGGPRTHGEGFIELNSWVPSEGPPQW LLARKRSGNFVYNCAVM
Sbjct: 478  NGWGLAFRACGDMLIVIGGPRTHGEGFIELNSWVPSEGPPQWNLLARKRSGNFVYNCAVM 537

Query: 1594 GC 1599
            GC
Sbjct: 538  GC 539


>ref|XP_003551972.1| PREDICTED: F-box/kelch-repeat protein SKIP11-like [Glycine max]
          Length = 539

 Score =  782 bits (2020), Expect = 0.0
 Identities = 397/544 (72%), Positives = 432/544 (79%), Gaps = 11/544 (2%)
 Frame = +1

Query: 1    MLDGRSCVVPRLFCSSCQAENDWSYMKYLLDLDIKNGKRPMEIDDDAEDEPKPRKCTKIF 180
            ML+GRSCVVPRLF SSCQA++ W +M YL DLDIKNGKRP+  D D E+EP+ RK  +  
Sbjct: 1    MLEGRSCVVPRLFPSSCQADDKWPFMTYLPDLDIKNGKRPL--DPDGEEEPQSRKANRRV 58

Query: 181  DSFHMVETVQISFQQQSLQAEDSVVVPQMD---QQTIEPLSICQGGQEEAGACNDVQLLA 351
            DS H  +T Q  FQQQS  A+DSVV PQMD   ++  E LS  Q  + E       QLL 
Sbjct: 59   DSHHQGKTTQFLFQQQSCHADDSVV-PQMDWDWRKGCESLSNWQ--RVEKTEAFSAQLLD 115

Query: 352  EQEKQLGGDSMECG--------DKQQHGDSSDSGIQPSDEPQLQHAXXXXXXXXXXXXXX 507
            E+E    GDS+           ++ Q  DSSDSG+Q S+E Q++                
Sbjct: 116  EREPHCTGDSLVVSTDLQSNKQEEDQSEDSSDSGVQQSNEQQMEQEVEGDLLDASDQQPL 175

Query: 508  XXXXXXXXXXXXDSGSLLPRMNRDSSIACLSRCSRSDYGSLASLNRSFRNIIRSGELYTW 687
                        DS SLLP MN D+SIACLS CSRSDYGSLASLNRSF N IRSGELY W
Sbjct: 176  EDQEEHHGGDSSDSSSLLPCMNWDNSIACLSHCSRSDYGSLASLNRSFWNTIRSGELYRW 235

Query: 688  RRLNGIMEHWVYFSCALLEWEAYDPIRQRWMHLPRMASNECFMCSDKESLAVGTELLVFG 867
            RRLNGI+EHW+YFSCALLEWEAYDPIR+RWMHLPRMASNECFMCSDKESLAVGTELLVFG
Sbjct: 236  RRLNGIIEHWIYFSCALLEWEAYDPIRERWMHLPRMASNECFMCSDKESLAVGTELLVFG 295

Query: 868  RELRSHVIYRYSLLTNSWSSGMRMNAPRCLFGSASLGEIAILAGGCDSEGRILDSAELYN 1047
            RE+RSHVIYRYSLLTNSW+SGMRMNAPRCLFGSASLGEIAILAGGCD +G I+DSAELYN
Sbjct: 296  REMRSHVIYRYSLLTNSWTSGMRMNAPRCLFGSASLGEIAILAGGCDLDGHIMDSAELYN 355

Query: 1048 SETQTFEMLPRMKKPRKMCSGVFMDGKFYVIGGIGGSDSKLLMCGEEYNLQTRTWTEIPN 1227
            SE QT+ +LP M KPRKMCSGVFMDGKFYVIGGIGG DSKLL CGEEYNLQTRTWTEIPN
Sbjct: 356  SENQTWVLLPSMNKPRKMCSGVFMDGKFYVIGGIGGKDSKLLTCGEEYNLQTRTWTEIPN 415

Query: 1228 MSPGRSTRGSEMPATAEAPPLVAVVDNELYAADYADMEVKKYDKERKAWFTIGRLPERAV 1407
            MSPGRS RG+EMPATAEAPPLVAVV+NELYAADYAD EVKKYDKER+ W TIGRLPERAV
Sbjct: 416  MSPGRSARGAEMPATAEAPPLVAVVNNELYAADYADTEVKKYDKERRVWVTIGRLPERAV 475

Query: 1408 SMNGWGLAFRACGNRLIVIGGPRTHGEGFIELNSWVPSEGPPQWRLLARKRSGNFVYNCA 1587
            SMNGWGLAFRACG+ LIVI GPRTHGEGFIELNSWVPSEGPPQW LLARKRSGNFVYNCA
Sbjct: 476  SMNGWGLAFRACGDMLIVISGPRTHGEGFIELNSWVPSEGPPQWNLLARKRSGNFVYNCA 535

Query: 1588 VMGC 1599
            VMGC
Sbjct: 536  VMGC 539


Top