BLASTX nr result

ID: Glycyrrhiza23_contig00015401 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00015401
         (314 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003605675.1| hypothetical protein MTR_4g036240 [Medicago ...    67   1e-09
ref|XP_003605674.1| hypothetical protein MTR_4g036240 [Medicago ...    67   1e-09
ref|XP_003600272.1| Replication protein A 70 kDa DNA-binding sub...    65   4e-09
ref|XP_003600268.1| ATP-dependent DNA helicase PIF1 [Medicago tr...    65   4e-09
ref|XP_003593181.1| hypothetical protein MTR_2g008650 [Medicago ...    60   1e-07

>ref|XP_003605675.1| hypothetical protein MTR_4g036240 [Medicago truncatula]
           gi|355506730|gb|AES87872.1| hypothetical protein
           MTR_4g036240 [Medicago truncatula]
          Length = 480

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 47/145 (32%), Positives = 67/145 (46%), Gaps = 42/145 (28%)
 Frame = -3

Query: 309 NKSAADLFEAEDKETGNHAIPKEICDLIGRSFLFKVEYKRPSNSNFEQSFVVKKICSDVS 130
           NKS AD+ E    + G   +P EI  L+  ++LFKVE+K   +  FEQSF VKK+C+D  
Sbjct: 284 NKSCADILETHRADEG--VLPTEIAALVNCTYLFKVEFKTAISPRFEQSFRVKKVCTDGV 341

Query: 129 VINKF---------------NEMIE-KDVVGRGRSATAVGSEN----------------- 49
           +IN+F               NEM     ++ +G+    VGS +                 
Sbjct: 342 IINQFKAKWAKEEATFIKNTNEMGSLSSLLDKGKDVLVVGSSSVQSHDLGSLSETIDKDK 401

Query: 48  ---------AISEDLMPKFASADID 1
                     ISEDL+PKF+S  +D
Sbjct: 402 NIIVEGTPIGISEDLLPKFSSVAVD 426


>ref|XP_003605674.1| hypothetical protein MTR_4g036240 [Medicago truncatula]
           gi|355506729|gb|AES87871.1| hypothetical protein
           MTR_4g036240 [Medicago truncatula]
          Length = 393

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 47/145 (32%), Positives = 67/145 (46%), Gaps = 42/145 (28%)
 Frame = -3

Query: 309 NKSAADLFEAEDKETGNHAIPKEICDLIGRSFLFKVEYKRPSNSNFEQSFVVKKICSDVS 130
           NKS AD+ E    + G   +P EI  L+  ++LFKVE+K   +  FEQSF VKK+C+D  
Sbjct: 197 NKSCADILETHRADEG--VLPTEIAALVNCTYLFKVEFKTAISPRFEQSFRVKKVCTDGV 254

Query: 129 VINKF---------------NEMIE-KDVVGRGRSATAVGSEN----------------- 49
           +IN+F               NEM     ++ +G+    VGS +                 
Sbjct: 255 IINQFKAKWAKEEATFIKNTNEMGSLSSLLDKGKDVLVVGSSSVQSHDLGSLSETIDKDK 314

Query: 48  ---------AISEDLMPKFASADID 1
                     ISEDL+PKF+S  +D
Sbjct: 315 NIIVEGTPIGISEDLLPKFSSVAVD 339


>ref|XP_003600272.1| Replication protein A 70 kDa DNA-binding subunit [Medicago
           truncatula] gi|355489320|gb|AES70523.1| Replication
           protein A 70 kDa DNA-binding subunit [Medicago
           truncatula]
          Length = 701

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 47/145 (32%), Positives = 67/145 (46%), Gaps = 42/145 (28%)
 Frame = -3

Query: 309 NKSAADLFEAEDKETGNHAIPKEICDLIGRSFLFKVEYKRPSNSNFEQSFVVKKICSDVS 130
           NKS AD+ E    + G   +P EI  L+  ++LFKVE+K   +  FEQSF VKK+C+D  
Sbjct: 505 NKSCADILETHRADEG--VLPTEIGALVNCTYLFKVEFKTAISPRFEQSFRVKKVCTDGV 562

Query: 129 VINKF---------------NEMIE-KDVVGRGRSATAVGSEN----------------- 49
           +IN+F               NEM     ++ +G+    VGS +                 
Sbjct: 563 IINQFKAKWAKEEATFIKNTNEMGSLSSLLDKGKDMLVVGSSSVQSHDLGSLSETIDKDK 622

Query: 48  ---------AISEDLMPKFASADID 1
                     ISEDL+PKF+S  +D
Sbjct: 623 NIIVEGTPIGISEDLLPKFSSVAVD 647


>ref|XP_003600268.1| ATP-dependent DNA helicase PIF1 [Medicago truncatula]
           gi|355489316|gb|AES70519.1| ATP-dependent DNA helicase
           PIF1 [Medicago truncatula]
          Length = 437

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 47/145 (32%), Positives = 67/145 (46%), Gaps = 42/145 (28%)
 Frame = -3

Query: 309 NKSAADLFEAEDKETGNHAIPKEICDLIGRSFLFKVEYKRPSNSNFEQSFVVKKICSDVS 130
           NKS AD+ E    + G   +P EI  L+  ++LFKVE+K   +  FEQSF VKK+C+D  
Sbjct: 131 NKSCADILETHRADEG--VLPTEIGALVNCTYLFKVEFKTAISPRFEQSFRVKKVCTDGV 188

Query: 129 VINKF---------------NEMIE-KDVVGRGRSATAVGSEN----------------- 49
           +IN+F               NEM     ++ +G+    VGS +                 
Sbjct: 189 IINQFKAKWAKEEATFIKNTNEMGSLSSLLDKGKDMLVVGSSSVQSHDLGSLSETIDKDK 248

Query: 48  ---------AISEDLMPKFASADID 1
                     ISEDL+PKF+S  +D
Sbjct: 249 NIIVEGTPIGISEDLLPKFSSVAVD 273


>ref|XP_003593181.1| hypothetical protein MTR_2g008650 [Medicago truncatula]
           gi|355482229|gb|AES63432.1| hypothetical protein
           MTR_2g008650 [Medicago truncatula]
          Length = 486

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 41/145 (28%), Positives = 63/145 (43%), Gaps = 42/145 (28%)
 Frame = -3

Query: 309 NKSAADLFEAEDKETGNHAIPKEICDLIGRSFLFKVEYKRPSNSNFEQSFVVKKICSDVS 130
           NKS  D+            +P EI  +IG++FLFKVE K   N  FEQSF V+KIC+   
Sbjct: 299 NKSCVDMLAEHGVAVSEGHLPPEIAGIIGKTFLFKVETKVDQNPRFEQSFRVRKICAMPD 358

Query: 129 VINKFNEMIEKD----------------VVGRGRSATAVGSENA---------------- 46
           VIN+F +   ++                ++ +G++    GS +                 
Sbjct: 359 VINEFKKKWGEEEAAFFKNAMEASSLSVLLDKGKAPMIAGSSDVLNQDDFSLTEPVEKCK 418

Query: 45  ----------ISEDLMPKFASADID 1
                     +++DL+PKFA AD +
Sbjct: 419 EMLLGEGSGIVTQDLLPKFAVADCE 443


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