BLASTX nr result
ID: Glycyrrhiza23_contig00015389
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza23_contig00015389
(270 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003534717.1| PREDICTED: pentatricopeptide repeat-containi... 153 2e-35
ref|XP_003547263.1| PREDICTED: pentatricopeptide repeat-containi... 150 1e-34
ref|XP_003632946.1| PREDICTED: pentatricopeptide repeat-containi... 114 8e-24
emb|CBI23204.3| unnamed protein product [Vitis vinifera] 114 8e-24
ref|XP_004168223.1| PREDICTED: pentatricopeptide repeat-containi... 108 5e-22
>ref|XP_003534717.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g04370-like [Glycine max]
Length = 755
Score = 153 bits (386), Expect = 2e-35
Identities = 77/90 (85%), Positives = 85/90 (94%)
Frame = +1
Query: 1 ILRAGVDLDAHVETSLIVMYLKGGNIEVAFRMFERSSDKDVVLWTAMISGLVQNENADKA 180
ILRAG LDAHVETSLIV+YLKGG I++AFRMFERSSDKDVVLWTAMISGLVQN +ADKA
Sbjct: 286 ILRAGFYLDAHVETSLIVVYLKGGKIDIAFRMFERSSDKDVVLWTAMISGLVQNGSADKA 345
Query: 181 LAVFHQMLKFGMKPTSATLASVITACAQLG 270
LAVF QMLKFG+KP++AT+ASVITACAQLG
Sbjct: 346 LAVFRQMLKFGVKPSTATMASVITACAQLG 375
Score = 64.3 bits (155), Expect = 1e-08
Identities = 31/90 (34%), Positives = 52/90 (57%)
Frame = +1
Query: 1 ILRAGVDLDAHVETSLIVMYLKGGNIEVAFRMFERSSDKDVVLWTAMISGLVQNENADKA 180
ILR + LD + SL+ MY K G+++ + +F+ + +D+V W AM++G QN +A
Sbjct: 387 ILRQELPLDVATQNSLVTMYAKCGHLDQSSIVFDMMNRRDLVSWNAMVTGYAQNGYVCEA 446
Query: 181 LAVFHQMLKFGMKPTSATLASVITACAQLG 270
L +F++M P S T+ S++ CA G
Sbjct: 447 LFLFNEMRSDNQTPDSITIVSLLQGCASTG 476
Score = 58.9 bits (141), Expect = 4e-07
Identities = 30/90 (33%), Positives = 51/90 (56%)
Frame = +1
Query: 1 ILRAGVDLDAHVETSLIVMYLKGGNIEVAFRMFERSSDKDVVLWTAMISGLVQNENADKA 180
++R G+ V+TSL+ MY K G+++ A R F + D+V W+A+I G + + A
Sbjct: 488 VIRNGLRPCILVDTSLVDMYCKCGDLDTAQRCFNQMPSHDLVSWSAIIVGYGYHGKGEAA 547
Query: 181 LAVFHQMLKFGMKPTSATLASVITACAQLG 270
L + + L+ GMKP SV+++C+ G
Sbjct: 548 LRFYSKFLESGMKPNHVIFLSVLSSCSHNG 577
Score = 58.5 bits (140), Expect = 5e-07
Identities = 29/89 (32%), Positives = 56/89 (62%)
Frame = +1
Query: 1 ILRAGVDLDAHVETSLIVMYLKGGNIEVAFRMFERSSDKDVVLWTAMISGLVQNENADKA 180
IL +G+ LDA++ +SLI Y K G +VA ++F+ +++VV WT +I + +A
Sbjct: 87 ILVSGLSLDAYIASSLINFYAKFGFADVARKVFDYMPERNVVPWTTIIGCYSRTGRVPEA 146
Query: 181 LAVFHQMLKFGMKPTSATLASVITACAQL 267
++F +M + G++P+S T+ S++ ++L
Sbjct: 147 FSLFDEMRRQGIQPSSVTVLSLLFGVSEL 175
>ref|XP_003547263.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g04370-like [Glycine max]
Length = 764
Score = 150 bits (378), Expect = 1e-34
Identities = 76/90 (84%), Positives = 83/90 (92%)
Frame = +1
Query: 1 ILRAGVDLDAHVETSLIVMYLKGGNIEVAFRMFERSSDKDVVLWTAMISGLVQNENADKA 180
ILR DLDAHVETSLIVMYLKGGNI++AFRMFERS DKDVVLWTAMISGLVQN +ADKA
Sbjct: 294 ILRTCFDLDAHVETSLIVMYLKGGNIDIAFRMFERSLDKDVVLWTAMISGLVQNGSADKA 353
Query: 181 LAVFHQMLKFGMKPTSATLASVITACAQLG 270
LAVF QMLKFG+K ++AT+ASVITACAQLG
Sbjct: 354 LAVFRQMLKFGVKSSTATMASVITACAQLG 383
Score = 60.1 bits (144), Expect = 2e-07
Identities = 30/90 (33%), Positives = 52/90 (57%)
Frame = +1
Query: 1 ILRAGVDLDAHVETSLIVMYLKGGNIEVAFRMFERSSDKDVVLWTAMISGLVQNENADKA 180
++R G+ V+TSL+ MY K G++++A R F + D+V W+A+I G + + A
Sbjct: 496 VIRNGLRPCILVDTSLVDMYCKCGDLDIAQRCFNQMPSHDLVSWSAIIVGYGYHGKGETA 555
Query: 181 LAVFHQMLKFGMKPTSATLASVITACAQLG 270
L + + L+ GMKP SV+++C+ G
Sbjct: 556 LRFYSKFLESGMKPNHVIFLSVLSSCSHNG 585
Score = 58.9 bits (141), Expect = 4e-07
Identities = 29/89 (32%), Positives = 57/89 (64%)
Frame = +1
Query: 1 ILRAGVDLDAHVETSLIVMYLKGGNIEVAFRMFERSSDKDVVLWTAMISGLVQNENADKA 180
IL +G+ LDA++ +SLI Y K G +VA ++F+ +++VV WT++I + +A
Sbjct: 95 ILVSGLSLDAYIASSLINFYAKFGFADVARKVFDFMPERNVVPWTSIIGCYSRTGRVPEA 154
Query: 181 LAVFHQMLKFGMKPTSATLASVITACAQL 267
++F +M + G++P+S T+ S++ ++L
Sbjct: 155 FSLFDEMRRQGIQPSSVTMLSLLFGVSEL 183
Score = 58.9 bits (141), Expect = 4e-07
Identities = 28/90 (31%), Positives = 52/90 (57%)
Frame = +1
Query: 1 ILRAGVDLDAHVETSLIVMYLKGGNIEVAFRMFERSSDKDVVLWTAMISGLVQNENADKA 180
+ R + +D + SL+ M+ K G+++ + +F++ + +++V W AMI+G QN KA
Sbjct: 395 MFRHELPMDIATQNSLVTMHAKCGHLDQSSIVFDKMNKRNLVSWNAMITGYAQNGYVCKA 454
Query: 181 LAVFHQMLKFGMKPTSATLASVITACAQLG 270
L +F++M P S T+ S++ CA G
Sbjct: 455 LFLFNEMRSDHQTPDSITIVSLLQGCASTG 484
>ref|XP_003632946.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g04370-like [Vitis vinifera]
Length = 732
Score = 114 bits (285), Expect = 8e-24
Identities = 56/90 (62%), Positives = 72/90 (80%)
Frame = +1
Query: 1 ILRAGVDLDAHVETSLIVMYLKGGNIEVAFRMFERSSDKDVVLWTAMISGLVQNENADKA 180
ILRAG++ D+H+ETSLI MYLK GN+ AFR+FE KDV+ WTAMISGLVQN+ AD A
Sbjct: 273 ILRAGLEQDSHIETSLIGMYLKCGNVNSAFRIFEGMMHKDVISWTAMISGLVQNDCADMA 332
Query: 181 LAVFHQMLKFGMKPTSATLASVITACAQLG 270
+ VF +MLK + P++AT+ASV+ ACA+LG
Sbjct: 333 VTVFRRMLKSRVMPSTATIASVLAACAELG 362
Score = 76.6 bits (187), Expect = 2e-12
Identities = 37/90 (41%), Positives = 58/90 (64%)
Frame = +1
Query: 1 ILRAGVDLDAHVETSLIVMYLKGGNIEVAFRMFERSSDKDVVLWTAMISGLVQNENADKA 180
ILR + LD + SL+ MY K G++E + +F+R S +D+V W A++SG QN + KA
Sbjct: 374 ILRQRIKLDIPSQNSLVTMYAKCGHLEQSCSVFDRMSRRDIVSWNAIVSGHAQNGHLCKA 433
Query: 181 LAVFHQMLKFGMKPTSATLASVITACAQLG 270
L +F++M K +P S T+ S++ ACA +G
Sbjct: 434 LLLFNEMRKARQRPDSITVVSLLQACASIG 463
>emb|CBI23204.3| unnamed protein product [Vitis vinifera]
Length = 907
Score = 114 bits (285), Expect = 8e-24
Identities = 56/90 (62%), Positives = 72/90 (80%)
Frame = +1
Query: 1 ILRAGVDLDAHVETSLIVMYLKGGNIEVAFRMFERSSDKDVVLWTAMISGLVQNENADKA 180
ILRAG++ D+H+ETSLI MYLK GN+ AFR+FE KDV+ WTAMISGLVQN+ AD A
Sbjct: 273 ILRAGLEQDSHIETSLIGMYLKCGNVNSAFRIFEGMMHKDVISWTAMISGLVQNDCADMA 332
Query: 181 LAVFHQMLKFGMKPTSATLASVITACAQLG 270
+ VF +MLK + P++AT+ASV+ ACA+LG
Sbjct: 333 VTVFRRMLKSRVMPSTATIASVLAACAELG 362
Score = 76.6 bits (187), Expect = 2e-12
Identities = 37/90 (41%), Positives = 58/90 (64%)
Frame = +1
Query: 1 ILRAGVDLDAHVETSLIVMYLKGGNIEVAFRMFERSSDKDVVLWTAMISGLVQNENADKA 180
ILR + LD + SL+ MY K G++E + +F+R S +D+V W A++SG QN + KA
Sbjct: 374 ILRQRIKLDIPSQNSLVTMYAKCGHLEQSCSVFDRMSRRDIVSWNAIVSGHAQNGHLCKA 433
Query: 181 LAVFHQMLKFGMKPTSATLASVITACAQLG 270
L +F++M K +P S T+ S++ ACA +G
Sbjct: 434 LLLFNEMRKARQRPDSITVVSLLQACASIG 463
>ref|XP_004168223.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g04370-like [Cucumis sativus]
Length = 743
Score = 108 bits (270), Expect = 5e-22
Identities = 49/90 (54%), Positives = 77/90 (85%)
Frame = +1
Query: 1 ILRAGVDLDAHVETSLIVMYLKGGNIEVAFRMFERSSDKDVVLWTAMISGLVQNENADKA 180
+L+ G+++D HVE++L+V+YL+ ++ A+++F+ +++KDVV+WTAMISGLVQN+ ADKA
Sbjct: 274 MLKDGLNIDQHVESALVVLYLRCRCLDPAYKVFKSTTEKDVVMWTAMISGLVQNDCADKA 333
Query: 181 LAVFHQMLKFGMKPTSATLASVITACAQLG 270
L VF+QM++ +KP++ATLAS + ACAQLG
Sbjct: 334 LGVFYQMIESNVKPSTATLASGLAACAQLG 363
Score = 64.7 bits (156), Expect = 7e-09
Identities = 29/90 (32%), Positives = 52/90 (57%)
Frame = +1
Query: 1 ILRAGVDLDAHVETSLIVMYLKGGNIEVAFRMFERSSDKDVVLWTAMISGLVQNENADKA 180
+LR G+ LD + SL+ MY K ++ + +F + +KD+V W A+++G +N K
Sbjct: 375 VLRQGIMLDIPAQNSLVTMYAKCNKLQQSCSIFNKMVEKDLVSWNAIVAGHAKNGYLSKG 434
Query: 181 LAVFHQMLKFGMKPTSATLASVITACAQLG 270
+ F++M K ++P S T+ S++ AC G
Sbjct: 435 IFFFNEMRKSFLRPDSITVTSLLQACGSAG 464
Score = 55.8 bits (133), Expect = 3e-06
Identities = 28/85 (32%), Positives = 51/85 (60%)
Frame = +1
Query: 13 GVDLDAHVETSLIVMYLKGGNIEVAFRMFERSSDKDVVLWTAMISGLVQNENADKALAVF 192
G+ D+++ +SLI Y K G I + ++F+ ++VV WT +I + + D A ++F
Sbjct: 79 GLSHDSYIGSSLISFYAKFGCIHLGRKVFDTMLKRNVVPWTTIIGSYSREGDIDIAFSMF 138
Query: 193 HQMLKFGMKPTSATLASVITACAQL 267
QM + G++PTS TL S++ ++L
Sbjct: 139 KQMRESGIQPTSVTLLSLLPGISKL 163
Score = 55.8 bits (133), Expect = 3e-06
Identities = 30/90 (33%), Positives = 49/90 (54%)
Frame = +1
Query: 1 ILRAGVDLDAHVETSLIVMYLKGGNIEVAFRMFERSSDKDVVLWTAMISGLVQNENADKA 180
+LR+ + ET+L+ MY K GN+E A + F+ +D+V W+ +I G N + A
Sbjct: 476 VLRSSLIPCIMTETALVDMYFKCGNLENAQKCFDCMLQRDLVAWSTLIVGYGFNGKGEIA 535
Query: 181 LAVFHQMLKFGMKPTSATLASVITACAQLG 270
L + + L GM+P SV++AC+ G
Sbjct: 536 LRKYSEFLGTGMEPNHVIFISVLSACSHGG 565