BLASTX nr result

ID: Glycyrrhiza23_contig00015355 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00015355
         (439 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003610842.1| Cyclic nucleotide gated channel [Medicago tr...   228   5e-58
ref|XP_003534112.1| PREDICTED: probable cyclic nucleotide-gated ...   210   1e-52
ref|XP_003548317.1| PREDICTED: probable cyclic nucleotide-gated ...   205   3e-51
ref|XP_003548315.1| PREDICTED: probable cyclic nucleotide-gated ...   205   3e-51
ref|XP_003533303.1| PREDICTED: probable cyclic nucleotide-gated ...   201   5e-50

>ref|XP_003610842.1| Cyclic nucleotide gated channel [Medicago truncatula]
           gi|355512177|gb|AES93800.1| Cyclic nucleotide gated
           channel [Medicago truncatula]
          Length = 742

 Score =  228 bits (580), Expect = 5e-58
 Identities = 109/145 (75%), Positives = 124/145 (85%)
 Frame = +1

Query: 1   PLPQIIMLFVLPHSLGSTGANYAKNLLRLVILIQYLPRLFRFLPPVVGLSPTGFIFESAR 180
           P+PQI+++F+LP+SLGS+GANYAKNLLRL IL+QY+PRLFRFLP ++G SPTGFIFESA 
Sbjct: 282 PIPQIMIMFILPNSLGSSGANYAKNLLRLGILVQYIPRLFRFLPLLIGQSPTGFIFESAW 341

Query: 181 ANVVINLLIFMLSGHVVGSCWYLFGLQRVNHCLRDACHRSNLPSCMELIDCKLPPFKWSN 360
           AN +INLLIFMLSGHVVGSCWYLFGLQRVN CLRDAC  +NL  CMELIDC      W N
Sbjct: 342 ANFIINLLIFMLSGHVVGSCWYLFGLQRVNQCLRDACRNANLTGCMELIDCN-SNATWRN 400

Query: 361 NAGAIACLNSTSGAFSYGIYANAVP 435
           + GA  CLNS+SG FSYGIYANAVP
Sbjct: 401 DKGANDCLNSSSGVFSYGIYANAVP 425


>ref|XP_003534112.1| PREDICTED: probable cyclic nucleotide-gated ion channel 20,
           chloroplastic-like [Glycine max]
          Length = 766

 Score =  210 bits (534), Expect = 1e-52
 Identities = 103/154 (66%), Positives = 119/154 (77%), Gaps = 9/154 (5%)
 Frame = +1

Query: 1   PLPQIIMLFVLPHSLGSTGANYAKNLLRLVILIQYLPRLFRFLPPVVGLSPTGFIFESAR 180
           PLPQI++LFVLP+SL   GANYAKNLLR  IL+QY+P+LFRFLP ++G SPTGFIFESA 
Sbjct: 306 PLPQIMILFVLPNSL--EGANYAKNLLRAAILVQYIPKLFRFLPLLIGQSPTGFIFESAW 363

Query: 181 ANVVINLLIFMLSGHVVGSCWYLFGLQRVNHCLRDACHRSNLPSCMELIDC--------- 333
           AN +INLLIFML+ HVVGSCWYLFGLQRVN CLRDACH SN+P CM+ IDC         
Sbjct: 364 ANFIINLLIFMLASHVVGSCWYLFGLQRVNQCLRDACHSSNIPGCMKFIDCGRGHGKNQP 423

Query: 334 KLPPFKWSNNAGAIACLNSTSGAFSYGIYANAVP 435
            L   +W NN  A+ACL+ +   FSYGIY NAVP
Sbjct: 424 SLRSDQWINNTDAVACLDPSPDGFSYGIYENAVP 457


>ref|XP_003548317.1| PREDICTED: probable cyclic nucleotide-gated ion channel 20,
           chloroplastic-like [Glycine max]
          Length = 766

 Score =  205 bits (522), Expect = 3e-51
 Identities = 102/154 (66%), Positives = 118/154 (76%), Gaps = 9/154 (5%)
 Frame = +1

Query: 1   PLPQIIMLFVLPHSLGSTGANYAKNLLRLVILIQYLPRLFRFLPPVVGLSPTGFIFESAR 180
           PLPQI++LFVLP+SL   GANYAKNLLR  IL+QY+P+LFRFLP ++G SP GFIFESA 
Sbjct: 306 PLPQIMILFVLPNSL--EGANYAKNLLRAAILVQYIPKLFRFLPLLIGQSPMGFIFESAW 363

Query: 181 ANVVINLLIFMLSGHVVGSCWYLFGLQRVNHCLRDACHRSNLPSCMELIDC--------- 333
           AN VINLLIF+L+ HVVGSCWYLFGLQRVN CLRDACH SN+P CM+ IDC         
Sbjct: 364 ANFVINLLIFVLASHVVGSCWYLFGLQRVNQCLRDACHSSNIPECMKFIDCGRGHGNNQP 423

Query: 334 KLPPFKWSNNAGAIACLNSTSGAFSYGIYANAVP 435
            L   +W NN  A+ACL+ +   FSYGIY NAVP
Sbjct: 424 GLRSDQWINNTQAVACLDPSPDGFSYGIYENAVP 457


>ref|XP_003548315.1| PREDICTED: probable cyclic nucleotide-gated ion channel 20,
           chloroplastic-like [Glycine max]
          Length = 772

 Score =  205 bits (522), Expect = 3e-51
 Identities = 103/152 (67%), Positives = 114/152 (75%), Gaps = 7/152 (4%)
 Frame = +1

Query: 1   PLPQIIMLFVLPHSLGSTGANYAKNLLRLVILIQYLPRLFRFLPPVVGLSPTGFIFESAR 180
           PLPQI++LFVLP  LG +GANYAKNLLR  IL+QY PRLFRFLP ++G SPTGFIFESA 
Sbjct: 307 PLPQIMILFVLPKYLGLSGANYAKNLLRAAILVQYFPRLFRFLPLLIGQSPTGFIFESAW 366

Query: 181 ANVVINLLIFMLSGHVVGSCWYLFGLQRVNHCLRDACHRSNLPSCMELIDCKLPPFK--- 351
           AN +INLLIFMLSGHVVGS WYLFGLQRVN CLR+AC  SN+  C   IDC         
Sbjct: 367 ANFIINLLIFMLSGHVVGSGWYLFGLQRVNQCLRNACRDSNITGCSAFIDCGYGADDVSG 426

Query: 352 ----WSNNAGAIACLNSTSGAFSYGIYANAVP 435
               W+NN  A ACLNS+S AF YGIY NAVP
Sbjct: 427 RAEVWNNNVNATACLNSSSDAFKYGIYVNAVP 458


>ref|XP_003533303.1| PREDICTED: probable cyclic nucleotide-gated ion channel 20,
           chloroplastic-like [Glycine max]
          Length = 774

 Score =  201 bits (511), Expect = 5e-50
 Identities = 98/156 (62%), Positives = 115/156 (73%), Gaps = 11/156 (7%)
 Frame = +1

Query: 1   PLPQIIMLFVLPHSLGSTGANYAKNLLRLVILIQYLPRLFRFLPPVVGLSPTGFIFESAR 180
           PLPQI++  VLP  LG++GANYAKNLLR VIL+QY+P+LFR LP ++G SPTGFIFESA 
Sbjct: 305 PLPQIMIFLVLPKHLGTSGANYAKNLLRAVILVQYIPKLFRILPLLIGQSPTGFIFESAW 364

Query: 181 ANVVINLLIFMLSGHVVGSCWYLFGLQRVNHCLRDACHRSNLPSCMELIDC--------- 333
           AN +INLLI+ML+ HVVGSCWYLFGLQRVN CLRDAC  S++  CM +IDC         
Sbjct: 365 ANFIINLLIYMLASHVVGSCWYLFGLQRVNQCLRDACGNSDIDRCMTVIDCGRHGHTRNN 424

Query: 334 --KLPPFKWSNNAGAIACLNSTSGAFSYGIYANAVP 435
                   WSNN+ AIACLN +S  F YGIY N VP
Sbjct: 425 YSDQTSSLWSNNSDAIACLNPSSSGFRYGIYVNGVP 460


Top