BLASTX nr result

ID: Glycyrrhiza23_contig00015316 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00015316
         (662 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK36982.1| unknown [Medicago truncatula]                           75   1e-11
ref|XP_003613588.1| F-box/FBD/LRR-repeat protein [Medicago trunc...    75   1e-11
gb|ABD33321.1| Cyclin-like F-box; FBD [Medicago truncatula]            74   2e-11
ref|XP_003625084.1| F-box/FBD/LRR-repeat protein [Medicago trunc...    74   2e-11

>gb|AFK36982.1| unknown [Medicago truncatula]
          Length = 418

 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 54/124 (43%), Positives = 75/124 (60%), Gaps = 3/124 (2%)
 Frame = -1

Query: 662 LFVVNLLKSTPNLVQLVIKGQYY--GAQVPDDFYYEDFE-DSCCLSKLEKVNISLGATYK 492
           L++V++LKS  NLV+LVI+  +   G +       E+ E  SCCL +L  VNI + + +K
Sbjct: 303 LYIVSVLKSASNLVELVIENYHEKGGYKTQAAGRVEELECSSCCLRQLLIVNIKVRSYFK 362

Query: 491 GDRFENQMSLIQYILANSSSLKTLTFDVVHLRFKHDDAPMLLSISQDLLRMERASQRAEI 312
                + MSLI++ILANSSSLKTLT + VH      D P+L +I      M+RAS RA I
Sbjct: 363 -----HVMSLIRFILANSSSLKTLTLN-VHRSHNKSDVPILFNI-----WMKRASHRAHI 411

Query: 311 NFLY 300
            FL+
Sbjct: 412 EFLH 415


>ref|XP_003613588.1| F-box/FBD/LRR-repeat protein [Medicago truncatula]
           gi|355514923|gb|AES96546.1| F-box/FBD/LRR-repeat protein
           [Medicago truncatula]
          Length = 499

 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 54/124 (43%), Positives = 75/124 (60%), Gaps = 3/124 (2%)
 Frame = -1

Query: 662 LFVVNLLKSTPNLVQLVIKGQYY--GAQVPDDFYYEDFE-DSCCLSKLEKVNISLGATYK 492
           L++V++LKS  NLV+LVI+  +   G +       E+ E  SCCL +L  VNI + + +K
Sbjct: 384 LYIVSVLKSASNLVELVIENYHEKGGYKTQAAGRVEELECSSCCLRQLLIVNIKVRSYFK 443

Query: 491 GDRFENQMSLIQYILANSSSLKTLTFDVVHLRFKHDDAPMLLSISQDLLRMERASQRAEI 312
                + MSLI++ILANSSSLKTLT + VH      D P+L +I      M+RAS RA I
Sbjct: 444 -----HVMSLIRFILANSSSLKTLTLN-VHRSHNKSDVPILFNI-----WMKRASHRAHI 492

Query: 311 NFLY 300
            FL+
Sbjct: 493 EFLH 496


>gb|ABD33321.1| Cyclin-like F-box; FBD [Medicago truncatula]
          Length = 430

 Score = 74.3 bits (181), Expect = 2e-11
 Identities = 56/121 (46%), Positives = 77/121 (63%), Gaps = 1/121 (0%)
 Frame = -1

Query: 662 LFVVNLLKSTPNLVQLVIKGQYYGAQVPDDFYYEDFE-DSCCLSKLEKVNISLGATYKGD 486
           L++V+ L+  P LV+L+I+     + V    + E+ E  S CL+ L  VNI + A Y+  
Sbjct: 307 LYIVSALQCAPGLVELIIQSYIDLSTVQVLDHSEELECSSDCLNNLRMVNIHVRA-YRIS 365

Query: 485 RFENQMSLIQYILANSSSLKTLTFDVVHLRFKHDDAPMLLSISQDLLRMERASQRAEINF 306
             ++ MSLI++ILANS+SL+TLTF +V    K  DA     ISQDLLRMERASQRA + F
Sbjct: 366 --QHAMSLIRFILANSTSLRTLTF-IVCPGSKSLDAHR---ISQDLLRMERASQRAHVEF 419

Query: 305 L 303
           L
Sbjct: 420 L 420


>ref|XP_003625084.1| F-box/FBD/LRR-repeat protein [Medicago truncatula]
           gi|355500099|gb|AES81302.1| F-box/FBD/LRR-repeat protein
           [Medicago truncatula]
          Length = 432

 Score = 74.3 bits (181), Expect = 2e-11
 Identities = 56/121 (46%), Positives = 77/121 (63%), Gaps = 1/121 (0%)
 Frame = -1

Query: 662 LFVVNLLKSTPNLVQLVIKGQYYGAQVPDDFYYEDFE-DSCCLSKLEKVNISLGATYKGD 486
           L++V+ L+  P LV+L+I+     + V    + E+ E  S CL+ L  VNI + A Y+  
Sbjct: 309 LYIVSALQCAPGLVELIIQSYIDLSTVQVLDHSEELECSSDCLNNLRMVNIHVRA-YRIS 367

Query: 485 RFENQMSLIQYILANSSSLKTLTFDVVHLRFKHDDAPMLLSISQDLLRMERASQRAEINF 306
             ++ MSLI++ILANS+SL+TLTF +V    K  DA     ISQDLLRMERASQRA + F
Sbjct: 368 --QHAMSLIRFILANSTSLRTLTF-IVCPGSKSLDAHR---ISQDLLRMERASQRAHVEF 421

Query: 305 L 303
           L
Sbjct: 422 L 422


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