BLASTX nr result

ID: Glycyrrhiza23_contig00015307 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00015307
         (1209 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001241466.1| uncharacterized protein LOC100815072 [Glycin...   236   9e-60
ref|XP_003630632.1| F-box/kelch-repeat protein [Medicago truncat...   234   4e-59
ref|XP_003594083.1| F-box/kelch-repeat protein [Medicago truncat...   233   1e-58
ref|XP_003546119.1| PREDICTED: F-box/kelch-repeat protein At3g23...   226   7e-57
ref|XP_003612197.1| F-box/kelch-repeat protein [Medicago truncat...   213   8e-53

>ref|NP_001241466.1| uncharacterized protein LOC100815072 [Glycine max]
            gi|255637050|gb|ACU18857.1| unknown [Glycine max]
          Length = 406

 Score =  236 bits (602), Expect = 9e-60
 Identities = 145/359 (40%), Positives = 205/359 (57%), Gaps = 10/359 (2%)
 Frame = +1

Query: 1    PVKSLMRFKCVCKQWNYMISDTHFAKSHLFRSTVDXXXXXXXXXXXXXXGQGEVMSCSVK 180
            PVKSL++F+CVCK W  +ISD +F K HL  S+                 +  + SCS+ 
Sbjct: 62   PVKSLLQFRCVCKSWMSLISDPYFMKKHLHLSSRCTHFTHHRIILSATTAEFHLKSCSLS 121

Query: 181  PLLFNDPLALTSPESVDFMLRHKYQ---IIGSCNGLVCLADFRNGHVRLWNPSTRLLSRK 351
             L FN+P + T  + +++ +++K++   I+GSCNGL+C A  +   V LWNPS R+ S+K
Sbjct: 122  SL-FNNPSS-TVCDDLNYPVKNKFRHDGIVGSCNGLLCFA-IKGDCVLLWNPSIRV-SKK 177

Query: 352  SPFMXXXXXXXXMAICHGFGYDHVSGKYKVVLVFPDPWFDNVHRTVTKVYTFGDSSWKTI 531
            SP +             G GYDHV+  YKVV VF DP    +   V KVY+   +SW+ I
Sbjct: 178  SPPLGNNWRPGCFT-AFGLGYDHVNEDYKVVAVFCDPSEYFIECKV-KVYSMATNSWRKI 235

Query: 532  QNLGYLGYPKNVLGKFVGDTLNWVVNGVSDVTPHQ-WVILSFDTRKEVFQEVLLPDFGDD 708
            Q+  +   P    GKFV  TLNW  N    + P   WVI+S D  KE ++EVL PD+  +
Sbjct: 236  QDFPHGFLPFQNSGKFVSGTLNWAAN--HSIGPSSFWVIVSLDLHKETYREVLPPDYEKE 293

Query: 709  NPEEPIQAVLKDCLCVCYDHEETHLVVWLMREYGVRESWMKLMVIPHEELQIFGFVP--- 879
            +   P   VL+ CLC+ YD+++TH VVW+M++YGVRESW+KL+ IP        +VP   
Sbjct: 294  DCSTPSLGVLQGCLCMNYDYKKTHFVVWMMKDYGVRESWVKLVSIP--------YVPNPE 345

Query: 880  ---YIEPLCMSENGMVLVYTTFVRALVYDSKVGRLEYPNIQSDKVWNEQFVYVESLVSP 1047
               Y  P  +SENG VL+   F   ++YD +    +YP I+S K W +  VYVE+LVSP
Sbjct: 346  DFSYSGPYYISENGKVLLMFEF-DLILYDPRNNSFKYPKIESGKGWFDAEVYVETLVSP 403


>ref|XP_003630632.1| F-box/kelch-repeat protein [Medicago truncatula]
            gi|355524654|gb|AET05108.1| F-box/kelch-repeat protein
            [Medicago truncatula]
          Length = 527

 Score =  234 bits (596), Expect = 4e-59
 Identities = 148/354 (41%), Positives = 197/354 (55%), Gaps = 8/354 (2%)
 Frame = +1

Query: 1    PVKSLMRFKCVCKQWNYMISDTHFAKSHLFRSTVDXXXXXXXXXXXXXXGQGEVMSCSVK 180
            PV+SL++FKCVCK W  +ISD  F+K+H   ST D              G+ E+++  VK
Sbjct: 59   PVRSLLQFKCVCKSWKTLISDPQFSKTHRKASTADPLLVTSVIHS----GKCEIIAYPVK 114

Query: 181  PLLFNDPLALTSP-ESVD-FMLRHKYQIIGSCNGLVCLADFRNGHVRLWNPSTRLLSRKS 354
            P     P  L++P ES   F  R KY II S NGL+CL D    +  LWNPS  L S  S
Sbjct: 115  P----PPENLSTPVESFSIFGTRRKYHIIDSFNGLLCLYDVSQFNFTLWNPSINLKSETS 170

Query: 355  PFMXXXXXXXXMAICHGFGYDHVSGKYKVVLVFPDPWFDNVHRTVTKVYTFGDSSWKTIQ 534
            P              HGFGYDHV+ KYKV++V  +    +    VT++YTFG++SWKT+ 
Sbjct: 171  P--TNVLSDYKFMTYHGFGYDHVNDKYKVLVVMRNAAVVDYREIVTRIYTFGENSWKTVP 228

Query: 535  NLGYLGYPKNVLGKFVGDTLNWVVNGVSDVTPHQWVILSFDTRKEVFQEVLLPDFGDDNP 714
            N  + G      GKFV  TLNW+VN  +     Q  ILSFD  KE F+EVLLP     + 
Sbjct: 229  N--FPGKSHVWSGKFVSGTLNWLVNKRAGGNSSQRGILSFDLGKETFREVLLPQHDGYDV 286

Query: 715  EEPIQAVLKDCLCVCYDH-EETHLVVWLMREYGVRESWMKLMVIPHEELQIFGFVPYIEP 891
                  VL +CLCVC+DH  + H  VW+M +YGV ESW KLM+IP ++L        ++P
Sbjct: 287  RNCGLYVLSNCLCVCFDHSNKNHWGVWMMNQYGVTESWTKLMIIPCKKLMRH----LVDP 342

Query: 892  LCMSENGMVL-----VYTTFVRALVYDSKVGRLEYPNIQSDKVWNEQFVYVESL 1038
            L +SENG+++     +Y+ FVR   Y+   GR+ YP I   K+  E  +Y ESL
Sbjct: 343  LFISENGVLILMMNSIYSKFVR---YNLNNGRIGYPKILG-KLGREMHIYHESL 392


>ref|XP_003594083.1| F-box/kelch-repeat protein [Medicago truncatula]
            gi|355483131|gb|AES64334.1| F-box/kelch-repeat protein
            [Medicago truncatula]
          Length = 366

 Score =  233 bits (593), Expect = 1e-58
 Identities = 142/354 (40%), Positives = 204/354 (57%), Gaps = 5/354 (1%)
 Frame = +1

Query: 1    PVKSLMRFKCVCKQWNYMISDTHFAKSHLFRSTVDXXXXXXXXXXXXXX-GQGEVMSCSV 177
            P+KSL+RF+CVCK W ++IS+ +F K  L  ST +                +  + SCS+
Sbjct: 21   PIKSLLRFRCVCKSWLHIISNPYFIKKQLHFSTQNTHFTTNHRIILSATTAEFHLKSCSI 80

Query: 178  KPLLFNDPLALTSPESVDFMLRHKYQ---IIGSCNGLVCLADFRNGHVRLWNPSTRLLSR 348
              L FN+P  ++  + +++ +++K++   I+GSCNGL+C A  +   V LWNPS R+ S+
Sbjct: 81   TSL-FNNPSTVS--DDLNYPVKNKFRHDGIVGSCNGLLCFA-IKGDCVLLWNPSIRV-SK 135

Query: 349  KSPFMXXXXXXXXMAICHGFGYDHVSGKYKVVLVFPDPWFDNVHRTVTKVYTFGDSSWKT 528
            KSP +           C G GYDHV+  YKVV VF DP  +    +  KVY+   ++W+ 
Sbjct: 136  KSPPLGNNWRPGCFT-CFGLGYDHVNDDYKVVAVFCDP-NEFFSESKVKVYSMATNTWRK 193

Query: 529  IQNLGYLGYP-KNVLGKFVGDTLNWVVNGVSDVTPHQWVILSFDTRKEVFQEVLLPDFGD 705
            I +  +   P +N  GKFV  TLNW  N  S  +   W I+S D  KE ++EVL PD+  
Sbjct: 194  IHDFPHGVSPYQNSSGKFVSGTLNWASN-YSIGSSSFWTIVSLDLEKETYREVLPPDYEK 252

Query: 706  DNPEEPIQAVLKDCLCVCYDHEETHLVVWLMREYGVRESWMKLMVIPHEELQIFGFVPYI 885
            +    P  +VLK CLC+ YD+++T  VVWLM++YGVRESW+KL+ IP+  L       Y 
Sbjct: 253  EECSTPSLSVLKGCLCMNYDYKKTDFVVWLMKDYGVRESWIKLLTIPY--LPNPEDFSYS 310

Query: 886  EPLCMSENGMVLVYTTFVRALVYDSKVGRLEYPNIQSDKVWNEQFVYVESLVSP 1047
             P C+SENG VL+   F   ++YD +     YP I+  K W +  VYVESLVSP
Sbjct: 311  GPYCISENGEVLLMFEF-DLILYDPRDHSFRYPRIEGGKGWFDAEVYVESLVSP 363


>ref|XP_003546119.1| PREDICTED: F-box/kelch-repeat protein At3g23880-like [Glycine max]
          Length = 405

 Score =  226 bits (577), Expect = 7e-57
 Identities = 140/358 (39%), Positives = 199/358 (55%), Gaps = 9/358 (2%)
 Frame = +1

Query: 1    PVKSLMRFKCVCKQWNYMISDTHFAKSHLFRSTVDXXXXXXXXXXXXXXGQGEVMSCSVK 180
            PVKSL++F+CVCK W  +I D +F K HL  S+                 +  + SCS+ 
Sbjct: 62   PVKSLLQFRCVCKSWMSLIYDPYFMKKHLHLSSRSTHFTHHRIILSATTAEFHLKSCSLS 121

Query: 181  PLLFNDPLALTSPESVDFMLRHKYQ---IIGSCNGLVCLADFRNGHVRLWNPSTRLLSRK 351
             L  N     T  + +++ +++K++   I+GSCNGL+C A  +   V LWNPS R+ S+K
Sbjct: 122  SLFNN---LSTVCDELNYPVKNKFRHDGIVGSCNGLLCFA-IKGDCVLLWNPSIRV-SKK 176

Query: 352  SPFMXXXXXXXXMAICHGFGYDHVSGKYKVVLVFPDPWFDNVHRTVTKVYTFGDSSWKTI 531
            SP +             G GYDHV+  YKVV VF DP    +   V KVY+   +SW+ I
Sbjct: 177  SPPLGNNWRPGCFT-AFGLGYDHVNEDYKVVAVFCDPSEYFIECKV-KVYSMATNSWRKI 234

Query: 532  QNLGYLGYPKNVLGKFVGDTLNWVVNGVSDVTPHQWVILSFDTRKEVFQEVLLPDFGDDN 711
            Q+  +   P    GKFV  TLNW  N  S  +   WVI+S D  KE ++EVL PD+  ++
Sbjct: 235  QDFPHGFSPFQNSGKFVSGTLNWAANH-SIGSSSLWVIVSLDLHKETYREVLPPDYEKED 293

Query: 712  PEEPIQAVLKDCLCVCYDHEETHLVVWLMREYGVRESWMKLMVIPHEELQIFGFVP---- 879
               P   VL+ CLC+ YD+++TH VVW+M++YG RESW+KL+ IP        +VP    
Sbjct: 294  CSTPGLGVLQGCLCMNYDYKKTHFVVWMMKDYGARESWVKLVSIP--------YVPNPEN 345

Query: 880  --YIEPLCMSENGMVLVYTTFVRALVYDSKVGRLEYPNIQSDKVWNEQFVYVESLVSP 1047
              Y  P  +SENG VL+   F   ++Y+ +    +YP I+S K W +  VYVE+LVSP
Sbjct: 346  FSYSGPYYISENGEVLLMFEF-DLILYNPRDNSFKYPKIESGKGWFDAEVYVETLVSP 402


>ref|XP_003612197.1| F-box/kelch-repeat protein [Medicago truncatula]
            gi|355513532|gb|AES95155.1| F-box/kelch-repeat protein
            [Medicago truncatula]
          Length = 380

 Score =  213 bits (542), Expect = 8e-53
 Identities = 141/361 (39%), Positives = 190/361 (52%), Gaps = 12/361 (3%)
 Frame = +1

Query: 1    PVKSLMRFKCVCKQWNYMISDTHFAKSHLFRSTVDXXXXXXXXXXXXXXGQGEVMSCSVK 180
            PV+SL+RFKCVCK W  + SDTHFA +H   STV                  E+ +  ++
Sbjct: 40   PVRSLLRFKCVCKSWKTLFSDTHFANNHFLISTV--YPQLVACESVSAYRTWEIKTYPIE 97

Query: 181  PLLFNDPLALTSPESVDFMLRHKYQIIGSCNGLVCLADFRNGHVRLWNPSTRLLSRKSPF 360
             LL N    +    +       +Y I+GSCNG +CL D     VRLWNPS  L S+ SP 
Sbjct: 98   SLLENSSTTVIPVSNTG---HQRYTILGSCNGFLCLYDNYQRCVRLWNPSINLKSKSSPT 154

Query: 361  MXXXXXXXXMAICHGFGYDHVSGKYKVVLVFPDPWFDNVHRTVTKVYTFGDSSWKTIQNL 540
            +          I +GFGYD V+ KYK++ V     F  +  T T +YTFG++S K ++  
Sbjct: 155  IDRF-------IYYGFGYDQVNHKYKLLAVKA---FSRI--TETMIYTFGENSCKNVEVK 202

Query: 541  GYLGYPKNV--LGKFVGDTLNWVVNGVSDVTPHQWVILSFDTRKEVFQEVLLPDFGDDNP 714
             +  YP N   LGKFV  TLNW+V    D    +  ILSFD  KE +++VLLP  G    
Sbjct: 203  DFPRYPPNRKHLGKFVSGTLNWIV----DERDGRATILSFDIEKETYRQVLLPQHGYA-V 257

Query: 715  EEPIQAVLKDCLCVCYDHEETHLVVWLMREYGVRESWMKLMVIPHEELQI--FGFVPYIE 888
              P   VL +C+CVC    +T   +W+M++YGV ESW KLM IPHE L I      P +E
Sbjct: 258  YSPGLYVLSNCICVCTSFLDTRWQLWMMKKYGVAESWTKLMSIPHENLLISNISLWPCVE 317

Query: 889  PLCMSENGMVLVYTTFVRALV-YDSKVGRLEYP-------NIQSDKVWNEQFVYVESLVS 1044
            PL +SENG+VL+  T    L+ Y+     L +P       NI   +   +  +Y ESL+S
Sbjct: 318  PLFISENGVVLLMNTSSSQLILYNLNSRGLYFPRIPPSYLNIYYIEPKLDLHIYHESLLS 377

Query: 1045 P 1047
            P
Sbjct: 378  P 378


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